RNA–Protein interactions for RNA: ENST00000584506.1

CDH8-212, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-212ENST00000584506 MRC1P22897 1456 aa8.52□□□□□ -1.05
CDH8-212ENST00000584506 EIF4A1P60842 406 aaKnown RBP8.52□□□□□ -1.05
CDH8-212ENST00000584506 ATF7IPQ6VMQ6 1270 aa8.52□□□□□ -1.05
CDH8-212ENST00000584506 FTSJ3Q8IY81 847 aaKnown RBP8.52□□□□□ -1.05
CDH8-212ENST00000584506 DZIP1LQ8IYY4 767 aaKnown RBP8.52□□□□□ -1.05
CDH8-212ENST00000584506 NFATC2IPQ8NCF5 419 aa8.52□□□□□ -1.05
CDH8-212ENST00000584506 EXOC6Q8TAG9 804 aa8.52□□□□□ -1.05
CDH8-212ENST00000584506 CRBNQ96SW2 442 aa8.52□□□□□ -1.05
CDH8-212ENST00000584506 USP21Q9UK80 565 aa8.52□□□□□ -1.05
CDH8-212ENST00000584506 NOB1Q9ULX3 412 aaKnown RBP8.52□□□□□ -1.05
CDH8-212ENST00000584506 DDB1Q16531 1140 aa8.51□□□□□ -1.05
CDH8-212ENST00000584506 KRT24Q2M2I5 525 aa8.51□□□□□ -1.05
CDH8-212ENST00000584506 ZNF790Q6PG37 636 aa8.51□□□□□ -1.05
CDH8-212ENST00000584506 TTC5Q8N0Z6 440 aa8.51□□□□□ -1.05
CDH8-212ENST00000584506 TMC2Q8TDI7 906 aa8.51□□□□□ -1.05
CDH8-212ENST00000584506 CCDC136Q96JN2 1154 aa8.51□□□□□ -1.05
CDH8-212ENST00000584506 API5Q9BZZ5 524 aaKnown RBP8.51□□□□□ -1.05
CDH8-212ENST00000584506 CHMP4BQ9H444 224 aaKnown RBP8.51□□□□□ -1.05
CDH8-212ENST00000584506 BCL9LQ86UU0 1499 aa8.51□□□□□ -1.05
CDH8-212ENST00000584506 LRP6O75581 1613 aa8.51□□□□□ -1.05
CDH8-212ENST00000584506 C20orf194Q5TEA3 1177 aa8.5□□□□□ -1.05
CDH8-212ENST00000584506 TNS2Q63HR2 1409 aa8.5□□□□□ -1.05
CDH8-212ENST00000584506 KRTAP3-3Q9BYR6 98 aa8.5□□□□□ -1.05
CDH8-212ENST00000584506 KRTAP3-2Q9BYR7 98 aa8.5□□□□□ -1.05
CDH8-212ENST00000584506 PTPRCP08575 1304 aa8.5□□□□□ -1.05
CDH8-212ENST00000584506 UBR2Q8IWV8 1755 aa8.49□□□□□ -1.05
CDH8-212ENST00000584506 TCERG1O14776 1098 aaKnown RBP8.49□□□□□ -1.05
CDH8-212ENST00000584506 TRIM27P14373 513 aa8.49□□□□□ -1.05
CDH8-212ENST00000584506 MMRN1Q13201 1228 aa8.49□□□□□ -1.05
CDH8-212ENST00000584506 HDGFL1Q5TGJ6 251 aa8.49□□□□□ -1.05
CDH8-212ENST00000584506 GPR153Q6NV75 609 aa8.49□□□□□ -1.05
CDH8-212ENST00000584506 PANK1Q8TE04 598 aa8.49□□□□□ -1.05
CDH8-212ENST00000584506 CLUAP1Q96AJ1 413 aa8.49□□□□□ -1.05
CDH8-212ENST00000584506 FMNL2Q96PY5 1086 aa8.49□□□□□ -1.05
CDH8-212ENST00000584506 TMOD3Q9NYL9 352 aa8.49□□□□□ -1.05
CDH8-212ENST00000584506 DDX19BQ9UMR2 479 aa8.49□□□□□ -1.05
CDH8-212ENST00000584506 COG6Q9Y2V7 657 aa8.49□□□□□ -1.05
CDH8-212ENST00000584506 TOGARAM1Q9Y4F4 1720 aa8.49□□□□□ -1.05
CDH8-212ENST00000584506 HEG1Q9ULI3 1381 aa8.48□□□□□ -1.05
CDH8-212ENST00000584506 LAMB4A4D0S4 1761 aa8.48□□□□□ -1.05
CDH8-212ENST00000584506 PAPPAQ13219 1627 aa8.48□□□□□ -1.05
CDH8-212ENST00000584506 KCNQ3O43525 872 aa8.48□□□□□ -1.05
CDH8-212ENST00000584506 GIGYF1O75420 1035 aaPredicted RBP8.48□□□□□ -1.05
CDH8-212ENST00000584506 SNRPA1P09661 255 aaKnown RBP8.48□□□□□ -1.05
CDH8-212ENST00000584506 MVPQ14764 893 aaKnown RBP8.48□□□□□ -1.05
CDH8-212ENST00000584506 TRPC5Q9UL62 973 aaPredicted RBP8.48□□□□□ -1.05
CDH8-212ENST00000584506 AFF2P51816 1311 aa8.48□□□□□ -1.05
CDH8-212ENST00000584506 C5P01031 1676 aa8.47□□□□□ -1.05
CDH8-212ENST00000584506 DOT1LQ8TEK3 1739 aa8.47□□□□□ -1.05
CDH8-212ENST00000584506 EIF2S2P20042 333 aaKnown RBP8.47□□□□□ -1.05
CDH8-212ENST00000584506 SLC39A6Q13433 755 aa8.47□□□□□ -1.05
CDH8-212ENST00000584506 FAM98CQ17RN3 349 aaKnown RBP8.47□□□□□ -1.05
CDH8-212ENST00000584506 VARS2Q5ST30 1063 aaKnown RBP8.47□□□□□ -1.05
CDH8-212ENST00000584506 B4GALNT3Q6L9W6 998 aa8.47□□□□□ -1.05
CDH8-212ENST00000584506 ITPRIPQ8IWB1 547 aa8.47□□□□□ -1.05
CDH8-212ENST00000584506 GPHNQ9NQX3 736 aaPredicted RBP8.47□□□□□ -1.05
CDH8-212ENST00000584506 DBF4Q9UBU7 674 aaPredicted RBP8.47□□□□□ -1.05
CDH8-212ENST00000584506 N4BP2Q86UW6 1770 aaPredicted RBP8.46□□□□□ -1.05
CDH8-212ENST00000584506 RLBP1P12271 317 aa8.46□□□□□ -1.06
CDH8-212ENST00000584506 NECTIN2Q92692 538 aa8.46□□□□□ -1.06
CDH8-212ENST00000584506 ZNF496Q96IT1 587 aaPredicted RBP8.46□□□□□ -1.06
CDH8-212ENST00000584506 GJD4Q96KN9 370 aaPredicted RBP8.46□□□□□ -1.06
CDH8-212ENST00000584506 TEX13AQ9BXU3 409 aaPredicted RBP8.46□□□□□ -1.06
CDH8-212ENST00000584506 CRISPLD2Q9H0B8 497 aa8.46□□□□□ -1.06
CDH8-212ENST00000584506 HYPKQ9NX55 129 aa8.46□□□□□ -1.06
CDH8-212ENST00000584506 ABCC4O15439 1325 aa8.46□□□□□ -1.06
CDH8-212ENST00000584506 A0A0G2JS52 829 aa8.45□□□□□ -1.06
CDH8-212ENST00000584506 CCT4P50991 539 aaKnown RBP8.45□□□□□ -1.06
CDH8-212ENST00000584506 FOXK1P85037 733 aa8.45□□□□□ -1.06
CDH8-212ENST00000584506 MYT1Q01538 1121 aa8.45□□□□□ -1.06
CDH8-212ENST00000584506 FLIIQ13045 1269 aa8.45□□□□□ -1.06
CDH8-212ENST00000584506 FKBP5Q13451 457 aaPredicted RBP8.45□□□□□ -1.06
CDH8-212ENST00000584506 ARSIQ5FYB1 569 aa8.45□□□□□ -1.06
CDH8-212ENST00000584506 INTS3Q68E01 1043 aaKnown RBP8.45□□□□□ -1.06
CDH8-212ENST00000584506 TMEM57Q8N5G2 664 aa8.45□□□□□ -1.06
CDH8-212ENST00000584506 MARCH10Q8NA82 808 aaPredicted RBP8.45□□□□□ -1.06
CDH8-212ENST00000584506 DDX21Q9NR30 783 aaKnown RBP eCLIP8.45□□□□□ -1.06
CDH8-212ENST00000584506 TNNQ9UQP3 1299 aa8.45□□□□□ -1.06
CDH8-212ENST00000584506 THSD7AQ9UPZ6 1657 aa8.45□□□□□ -1.06
CDH8-212ENST00000584506 ERBB4Q15303 1308 aa8.45□□□□□ -1.06
CDH8-212ENST00000584506 BCL9O00512 1426 aa8.45□□□□□ -1.06
CDH8-212ENST00000584506 ATRNO75882 1429 aa8.45□□□□□ -1.06
CDH8-212ENST00000584506 GLI3P10071 1580 aa8.44□□□□□ -1.06
CDH8-212ENST00000584506 DDX58O95786 925 aaKnown RBP8.44□□□□□ -1.06
CDH8-212ENST00000584506 DSG2Q14126 1118 aa8.44□□□□□ -1.06
CDH8-212ENST00000584506 G2E3Q7L622 706 aa8.44□□□□□ -1.06
CDH8-212ENST00000584506 VSIG10Q8N0Z9 540 aa8.44□□□□□ -1.06
CDH8-212ENST00000584506 SPRYD3Q8NCJ5 442 aa8.44□□□□□ -1.06
CDH8-212ENST00000584506 PIGBQ92521 554 aa8.44□□□□□ -1.06
CDH8-212ENST00000584506 QTRT2Q9H974 415 aaKnown RBP8.44□□□□□ -1.06
CDH8-212ENST00000584506 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.44□□□□□ -1.06
CDH8-212ENST00000584506 CHPF2Q9P2E5 772 aa8.44□□□□□ -1.06
CDH8-212ENST00000584506 ONECUT3O60422 494 aaPredicted RBP8.43□□□□□ -1.06
CDH8-212ENST00000584506 PTCD1O75127 700 aaKnown RBP8.43□□□□□ -1.06
CDH8-212ENST00000584506 PRIM1P49642 420 aaKnown RBP8.43□□□□□ -1.06
CDH8-212ENST00000584506 ZNF772Q68DY9 489 aaPredicted RBP8.43□□□□□ -1.06
CDH8-212ENST00000584506 CENPQQ7L2Z9 268 aaPredicted RBP8.43□□□□□ -1.06
CDH8-212ENST00000584506 PLPP6Q8IY26 295 aa8.43□□□□□ -1.06
CDH8-212ENST00000584506 ZNF687Q8N1G0 1237 aa8.43□□□□□ -1.06
CDH8-212ENST00000584506 FBXO41Q8TF61 875 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms