RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 BIN1O00499 593 aa15.04■□□□□ -0
RNF43-208ENST00000584437 GOLGA8AA7E2F4 631 aa15.03■□□□□ -0
RNF43-208ENST00000584437 ANAPC15P60006 121 aa15.03■□□□□ -0
RNF43-208ENST00000584437 CCDC94Q9BW85 323 aaPredicted RBP15.03■□□□□ -0
RNF43-208ENST00000584437 SLU7O95391 586 aaKnown RBP15.03■□□□□ -0
RNF43-208ENST00000584437 TAF7Q15545 349 aaPredicted RBP15.03■□□□□ -0
RNF43-208ENST00000584437 MAATS1Q7Z4T9 603 aa15.03■□□□□ -0
RNF43-208ENST00000584437 GOLIM4O00461 696 aa15.03■□□□□ -0
RNF43-208ENST00000584437 AMPD3Q01432 767 aa15.03■□□□□ -0
RNF43-208ENST00000584437 NUCB1Q02818 461 aa15.03■□□□□ -0
RNF43-208ENST00000584437 GIMAP6Q6P9H5 292 aa15.03■□□□□ -0
RNF43-208ENST00000584437 HOOK3Q86VS8 718 aa15.03■□□□□ -0
RNF43-208ENST00000584437 KRI1Q8N9T8 703 aaKnown RBP15.03■□□□□ -0
RNF43-208ENST00000584437 IQCA1Q86XH1 822 aa15.03■□□□□ -0
RNF43-208ENST00000584437 DDX54Q8TDD1 881 aaKnown RBP15.03■□□□□ -0
RNF43-208ENST00000584437 GTF2A1P52655 376 aaPredicted RBP15.03■□□□□ -0
RNF43-208ENST00000584437 MCM10Q7L590 875 aa15.03■□□□□ -0
RNF43-208ENST00000584437 CTAGE15A4D2H0 777 aa15.02■□□□□ -0
RNF43-208ENST00000584437 CTAGE8P0CG41 777 aa15.02■□□□□ -0
RNF43-208ENST00000584437 HSPA4P34932 840 aa15.02■□□□□ -0
RNF43-208ENST00000584437 NF2P35240 595 aa15.02■□□□□ -0
RNF43-208ENST00000584437 CTAGE6Q86UF2 777 aa15.02■□□□□ -0
RNF43-208ENST00000584437 CTAGE4Q8IX94 777 aa15.02■□□□□ -0
RNF43-208ENST00000584437 PIBF1Q8WXW3 757 aa15.02■□□□□ -0
RNF43-208ENST00000584437 TMX1Q9H3N1 280 aa15.02■□□□□ -0
RNF43-208ENST00000584437 CCDC61Q9Y6R9 512 aa15.02■□□□□ -0
RNF43-208ENST00000584437 CCDC186Q7Z3E2 898 aa15.02■□□□□ -0
RNF43-208ENST00000584437 BBXQ8WY36 941 aaPredicted RBP15.02□□□□□ -0.01
RNF43-208ENST00000584437 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.02□□□□□ -0.01
RNF43-208ENST00000584437 USP5P45974 858 aa15.02□□□□□ -0.01
RNF43-208ENST00000584437 CTAGE1Q96RT6 745 aa15.02□□□□□ -0.01
RNF43-208ENST00000584437 CCDC194A0A1B0GVG4 234 aa15.01□□□□□ -0.01
RNF43-208ENST00000584437 MAP3K12Q12852 859 aa15.01□□□□□ -0.01
RNF43-208ENST00000584437 IFI16Q16666 785 aaKnown RBP15.01□□□□□ -0.01
RNF43-208ENST00000584437 JADE2Q9NQC1 790 aa15.01□□□□□ -0.01
RNF43-208ENST00000584437 NCAPD3P42695 1498 aa15.01□□□□□ -0.01
RNF43-208ENST00000584437 NSD2O96028 1365 aa15.01□□□□□ -0.01
RNF43-208ENST00000584437 UBASH3AP57075 661 aa15.01□□□□□ -0.01
RNF43-208ENST00000584437 FAM69CQ0P6D2 419 aa15.01□□□□□ -0.01
RNF43-208ENST00000584437 OSCARQ8IYS5 282 aa15.01□□□□□ -0.01
RNF43-208ENST00000584437 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.01□□□□□ -0.012e-8■■□□□ 14
RNF43-208ENST00000584437 A0A087WZG4 1122 aa15.01□□□□□ -0.01
RNF43-208ENST00000584437 SYNJ1O43426 1573 aa15.01□□□□□ -0.01
RNF43-208ENST00000584437 ARHGAP45Q92619 1136 aa15.01□□□□□ -0.01
RNF43-208ENST00000584437 NEK1Q96PY6 1258 aa15.01□□□□□ -0.01
RNF43-208ENST00000584437 AQRO60306 1485 aaKnown RBP eCLIP15.01□□□□□ -0.019e-8■■■■□ 23.6
RNF43-208ENST00000584437 IARSP41252 1262 aaKnown RBP15.01□□□□□ -0.01
RNF43-208ENST00000584437 CCT2P78371 535 aaKnown RBP15.01□□□□□ -0.01
RNF43-208ENST00000584437 USP16Q9Y5T5 823 aa15.01□□□□□ -0.01
RNF43-208ENST00000584437 RBM25P49756 843 aaKnown RBP15□□□□□ -0.01
RNF43-208ENST00000584437 DNA2P51530 1060 aa15□□□□□ -0.01
RNF43-208ENST00000584437 TNIP1Q15025 636 aa15□□□□□ -0.01
RNF43-208ENST00000584437 C6orf163Q5TEZ5 329 aa15□□□□□ -0.01
RNF43-208ENST00000584437 CCDC8Q9H0W5 538 aaPredicted RBP15□□□□□ -0.01
RNF43-208ENST00000584437 ORC3Q9UBD5 711 aaPredicted RBP15□□□□□ -0.01
RNF43-208ENST00000584437 PRG4Q92954 1404 aaPredicted RBP15□□□□□ -0.01
RNF43-208ENST00000584437 IFIT3O14879 490 aaKnown RBP15□□□□□ -0.01
RNF43-208ENST00000584437 NEBLO76041 1014 aa15□□□□□ -0.01
RNF43-208ENST00000584437 ANO6Q4KMQ2 910 aa15□□□□□ -0.01
RNF43-208ENST00000584437 CYB5RLQ6IPT4 315 aa15□□□□□ -0.01
RNF43-208ENST00000584437 FEZ1Q99689 392 aa15□□□□□ -0.01
RNF43-208ENST00000584437 PANK2Q9BZ23 570 aa15□□□□□ -0.01
RNF43-208ENST00000584437 DNAI1Q9UI46 699 aa15□□□□□ -0.01
RNF43-208ENST00000584437 TMCO5BA8MYB1 307 aa15□□□□□ -0.01
RNF43-208ENST00000584437 OPA1O60313 960 aa15□□□□□ -0.01
RNF43-208ENST00000584437 SPAG1Q07617 926 aa15□□□□□ -0.01
RNF43-208ENST00000584437 CETN1Q12798 172 aa15□□□□□ -0.01
RNF43-208ENST00000584437 DDX12PQ92771 950 aa15□□□□□ -0.01
RNF43-208ENST00000584437 ABCF2Q9UG63 623 aa15□□□□□ -0.01
RNF43-208ENST00000584437 TRIM21P19474 475 aaKnown RBP14.99□□□□□ -0.01
RNF43-208ENST00000584437 TOM1L2Q6ZVM7 507 aa14.99□□□□□ -0.01
RNF43-208ENST00000584437 KCNG4Q8TDN1 519 aa14.99□□□□□ -0.01
RNF43-208ENST00000584437 MIS18AQ9NYP9 233 aa14.99□□□□□ -0.01
RNF43-208ENST00000584437 MINDY4BA8MYZ0 360 aa14.99□□□□□ -0.01
RNF43-208ENST00000584437 N4BP3O15049 544 aa14.99□□□□□ -0.01
RNF43-208ENST00000584437 CYLC1P35663 651 aaPredicted RBP14.99□□□□□ -0.01
RNF43-208ENST00000584437 UBE4AQ14139 1066 aa14.99□□□□□ -0.01
RNF43-208ENST00000584437 DNAI2Q9GZS0 605 aa14.99□□□□□ -0.01
RNF43-208ENST00000584437 TCP11L1Q9NUJ3 509 aa14.99□□□□□ -0.01
RNF43-208ENST00000584437 RMND1Q9NWS8 449 aa14.99□□□□□ -0.01
RNF43-208ENST00000584437 TUBBP07437 444 aa14.99□□□□□ -0.01
RNF43-208ENST00000584437 NLRP5P59047 1200 aa14.99□□□□□ -0.01
RNF43-208ENST00000584437 USP48Q86UV5 1035 aa14.99□□□□□ -0.01
RNF43-208ENST00000584437 ZSWIM4Q9H7M6 989 aa14.99□□□□□ -0.01
RNF43-208ENST00000584437 FSD2A1L4K1 749 aa14.99□□□□□ -0.01
RNF43-208ENST00000584437 MATR3P43243 847 aaKnown RBP eCLIP14.99□□□□□ -0.019e-7■■■□□ 15.7
RNF43-208ENST00000584437 ZNF830Q96NB3 372 aaPredicted RBP14.99□□□□□ -0.01
RNF43-208ENST00000584437 F6X3S4 739 aa14.98□□□□□ -0.01
RNF43-208ENST00000584437 MEX3CQ5U5Q3 659 aaKnown RBP14.98□□□□□ -0.01
RNF43-208ENST00000584437 NUDT16Q96DE0 195 aaKnown RBP14.98□□□□□ -0.01
RNF43-208ENST00000584437 NSRP1Q9H0G5 558 aaKnown RBP14.98□□□□□ -0.01
RNF43-208ENST00000584437 SYKP43405 635 aa14.98□□□□□ -0.01
RNF43-208ENST00000584437 CATIPQ7Z7H3 387 aa14.98□□□□□ -0.01
RNF43-208ENST00000584437 KCNH5Q8NCM2 988 aa14.98□□□□□ -0.01
RNF43-208ENST00000584437 CALML4Q96GE6 196 aa14.98□□□□□ -0.01
RNF43-208ENST00000584437 RSPH14Q9UHP6 348 aa14.98□□□□□ -0.01
RNF43-208ENST00000584437 CCDC40Q4G0X9 1142 aa14.98□□□□□ -0.01
RNF43-208ENST00000584437 CTNNBL1Q8WYA6 563 aaPredicted RBP14.98□□□□□ -0.01
RNF43-208ENST00000584437 HYPKQ9NX55 129 aa14.98□□□□□ -0.01
RNF43-208ENST00000584437 FLIIQ13045 1269 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms