RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 ADAMTS7Q9UKP4 1686 aa12.95□□□□□ -0.34
MKS1-212ENST00000583577 SERPINB2P05120 415 aa12.94□□□□□ -0.34
MKS1-212ENST00000583577 NFIXQ14938 502 aa12.94□□□□□ -0.34
MKS1-212ENST00000583577 TAOK3Q9H2K8 898 aa12.94□□□□□ -0.34
MKS1-212ENST00000583577 POLKQ9UBT6 870 aa12.94□□□□□ -0.34
MKS1-212ENST00000583577 SLX4Q8IY92 1834 aa12.94□□□□□ -0.34
MKS1-212ENST00000583577 TJP1Q07157 1748 aa12.93□□□□□ -0.34
MKS1-212ENST00000583577 CUL9Q8IWT3 2517 aa12.93□□□□□ -0.34
MKS1-212ENST00000583577 AOC2O75106 756 aa12.93□□□□□ -0.34
MKS1-212ENST00000583577 L3MBTL3Q96JM7 780 aaPredicted RBP12.93□□□□□ -0.34
MKS1-212ENST00000583577 HACL1Q9UJ83 578 aa12.93□□□□□ -0.34
MKS1-212ENST00000583577 COL11A2P13942 1736 aaPredicted RBP12.93□□□□□ -0.34
MKS1-212ENST00000583577 CARMIL3Q8ND23 1372 aa12.93□□□□□ -0.34
MKS1-212ENST00000583577 EPHX2P34913 555 aa12.92□□□□□ -0.34
MKS1-212ENST00000583577 FAM9BQ8IZU0 186 aa12.92□□□□□ -0.34
MKS1-212ENST00000583577 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.92□□□□□ -0.34
MKS1-212ENST00000583577 MYBBP1AQ9BQG0 1328 aaKnown RBP12.91□□□□□ -0.34
MKS1-212ENST00000583577 ERVV-2B6SEH9 535 aa12.91□□□□□ -0.34
MKS1-212ENST00000583577 FMR1Q06787 632 aaKnown RBP eCLIP12.91□□□□□ -0.34
MKS1-212ENST00000583577 DDX21Q9NR30 783 aaKnown RBP eCLIP12.91□□□□□ -0.34
MKS1-212ENST00000583577 LTBP3Q9NS15 1303 aa12.9□□□□□ -0.34
MKS1-212ENST00000583577 CABP4P57796 275 aa12.9□□□□□ -0.34
MKS1-212ENST00000583577 INTS5Q6P9B9 1019 aaKnown RBP12.9□□□□□ -0.34
MKS1-212ENST00000583577 NCAPD2Q15021 1401 aa12.89□□□□□ -0.35
MKS1-212ENST00000583577 A0A0C4DFX4 3053 aa12.89□□□□□ -0.35
MKS1-212ENST00000583577 CA12O43570 354 aa12.89□□□□□ -0.35
MKS1-212ENST00000583577 BICDL1Q6ZP65 573 aa12.89□□□□□ -0.35
MKS1-212ENST00000583577 PNMA8AQ86V59 439 aaPredicted RBP12.89□□□□□ -0.35
MKS1-212ENST00000583577 ZNF541Q9H0D2 1346 aa12.88□□□□□ -0.35
MKS1-212ENST00000583577 MAP2K2P36507 400 aa12.88□□□□□ -0.35
MKS1-212ENST00000583577 CCDC24Q8N4L8 307 aa12.88□□□□□ -0.35
MKS1-212ENST00000583577 PNISRQ8TF01 805 aaKnown RBP12.88□□□□□ -0.35
MKS1-212ENST00000583577 EYA1Q99502 592 aa12.88□□□□□ -0.35
MKS1-212ENST00000583577 MTHFSP49914 203 aa12.87□□□□□ -0.35
MKS1-212ENST00000583577 CCDC184Q52MB2 194 aa12.87□□□□□ -0.35
MKS1-212ENST00000583577 NARFQ9UHQ1 456 aa12.87□□□□□ -0.35
MKS1-212ENST00000583577 ARFGEF2Q9Y6D5 1785 aa12.86□□□□□ -0.35
MKS1-212ENST00000583577 CEP290O15078 2479 aa12.86□□□□□ -0.35
MKS1-212ENST00000583577 EIF4A2Q14240 407 aaKnown RBP12.86□□□□□ -0.35
MKS1-212ENST00000583577 ERICH6Q7L0X2 663 aa12.86□□□□□ -0.35
MKS1-212ENST00000583577 BCL2L12Q9HB09 334 aa12.86□□□□□ -0.35
MKS1-212ENST00000583577 SOS1Q07889 1333 aaPredicted RBP12.86□□□□□ -0.35
MKS1-212ENST00000583577 PDE6BP35913 854 aa12.85□□□□□ -0.35
MKS1-212ENST00000583577 GCC1Q96CN9 775 aa12.85□□□□□ -0.35
MKS1-212ENST00000583577 TLL2Q9Y6L7 1015 aa12.85□□□□□ -0.35
MKS1-212ENST00000583577 COL15A1P39059 1388 aa12.84□□□□□ -0.35
MKS1-212ENST00000583577 AKAP11Q9UKA4 1901 aa12.84□□□□□ -0.35
MKS1-212ENST00000583577 TRAF5O00463 557 aa12.84□□□□□ -0.35
MKS1-212ENST00000583577 HSP90AB1P08238 724 aaKnown RBP12.84□□□□□ -0.35
MKS1-212ENST00000583577 PPP2R1AP30153 589 aa12.84□□□□□ -0.35
MKS1-212ENST00000583577 CST9Q5W186 159 aa12.84□□□□□ -0.35
MKS1-212ENST00000583577 CIAPIN1Q6FI81 312 aa12.84□□□□□ -0.35
MKS1-212ENST00000583577 PRPF40BQ6NWY9 871 aaKnown RBP12.84□□□□□ -0.35
MKS1-212ENST00000583577 DNAJC10Q8IXB1 793 aa12.84□□□□□ -0.35
MKS1-212ENST00000583577 CFAP53Q96M91 514 aa12.84□□□□□ -0.35
MKS1-212ENST00000583577 PDZRN3Q9UPQ7 1066 aa12.84□□□□□ -0.35
MKS1-212ENST00000583577 MKI67P46013 3256 aaKnown RBP12.84□□□□□ -0.35
MKS1-212ENST00000583577 BRPF1P55201 1214 aaPredicted RBP12.83□□□□□ -0.36
MKS1-212ENST00000583577 SOGA3Q5TF21 947 aa12.83□□□□□ -0.36
MKS1-212ENST00000583577 NFATC2IPQ8NCF5 419 aa12.83□□□□□ -0.36
MKS1-212ENST00000583577 CNKSR1Q969H4 720 aa12.83□□□□□ -0.36
MKS1-212ENST00000583577 BRIP1Q9BX63 1249 aa12.83□□□□□ -0.36
MKS1-212ENST00000583577 ZNF277Q9NRM2 450 aaPredicted RBP12.83□□□□□ -0.36
MKS1-212ENST00000583577 DIAPH1O60610 1272 aaKnown RBP12.82□□□□□ -0.36
MKS1-212ENST00000583577 HABP4Q5JVS0 413 aaKnown RBP12.82□□□□□ -0.36
MKS1-212ENST00000583577 NBPF15Q8N660 670 aa12.82□□□□□ -0.36
MKS1-212ENST00000583577 TRIOBPQ9H2D6 2365 aa12.82□□□□□ -0.36
MKS1-212ENST00000583577 SZT2Q5T011 3432 aa12.81□□□□□ -0.36
MKS1-212ENST00000583577 ZNF530Q6P9A1 599 aaPredicted RBP12.81□□□□□ -0.36
MKS1-212ENST00000583577 COL3A1P02461 1466 aaPredicted RBP12.8□□□□□ -0.36
MKS1-212ENST00000583577 NPHP1O15259 732 aa12.8□□□□□ -0.36
MKS1-212ENST00000583577 IL13P35225 146 aa12.8□□□□□ -0.36
MKS1-212ENST00000583577 CCDC93Q567U6 631 aa12.8□□□□□ -0.36
MKS1-212ENST00000583577 STYK1Q6J9G0 422 aa12.8□□□□□ -0.36
MKS1-212ENST00000583577 PRR5LQ6MZQ0 368 aa12.8□□□□□ -0.36
MKS1-212ENST00000583577 ZBTB1Q9Y2K1 713 aa12.8□□□□□ -0.36
MKS1-212ENST00000583577 GJA3Q9Y6H8 435 aa12.8□□□□□ -0.36
MKS1-212ENST00000583577 SCN11AQ9UI33 1791 aa12.79□□□□□ -0.36
MKS1-212ENST00000583577 CYP19A1P11511 503 aaPredicted RBP12.79□□□□□ -0.36
MKS1-212ENST00000583577 LMOD1P29536 600 aaPredicted RBP12.79□□□□□ -0.36
MKS1-212ENST00000583577 FKBP4Q02790 459 aaKnown RBP eCLIP12.79□□□□□ -0.36
MKS1-212ENST00000583577 PLEKHO1Q53GL0 409 aaPredicted RBP12.79□□□□□ -0.36
MKS1-212ENST00000583577 TBC1D9BQ66K14 1250 aa12.79□□□□□ -0.36
MKS1-212ENST00000583577 SAPCD2Q86UD0 394 aa12.79□□□□□ -0.36
MKS1-212ENST00000583577 GPC2Q8N158 579 aa12.79□□□□□ -0.36
MKS1-212ENST00000583577 U2SURPO15042 1029 aaKnown RBP12.78□□□□□ -0.36
MKS1-212ENST00000583577 CELF2O95319 508 aaKnown RBP12.78□□□□□ -0.36
MKS1-212ENST00000583577 SRGNP10124 158 aa12.78□□□□□ -0.36
MKS1-212ENST00000583577 CANXP27824 592 aaKnown RBP12.78□□□□□ -0.36
MKS1-212ENST00000583577 CCDC136Q96JN2 1154 aa12.78□□□□□ -0.36
MKS1-212ENST00000583577 ZIC5Q96T25 663 aa12.78□□□□□ -0.36
MKS1-212ENST00000583577 FZD9O00144 591 aa12.77□□□□□ -0.37
MKS1-212ENST00000583577 SULT6B1Q6IMI4 303 aa12.77□□□□□ -0.37
MKS1-212ENST00000583577 OLFM4Q6UX06 510 aa12.77□□□□□ -0.37
MKS1-212ENST00000583577 MASTLQ96GX5 879 aa12.77□□□□□ -0.37
MKS1-212ENST00000583577 IARSP41252 1262 aaKnown RBP12.76□□□□□ -0.37
MKS1-212ENST00000583577 EPS15P42566 896 aa12.76□□□□□ -0.37
MKS1-212ENST00000583577 C1orf141Q5JVX7 400 aa12.76□□□□□ -0.37
MKS1-212ENST00000583577 C7orf43Q8WVR3 580 aa12.76□□□□□ -0.37
MKS1-212ENST00000583577 ZNF408Q9H9D4 720 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms