RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 TTLL6Q8N841 843 aa32.59■■■□□ 2.81
TSEN54-209ENST00000583454 TOMM70O94826 608 aa32.58■■■□□ 2.81
TSEN54-209ENST00000583454 MIS18AQ9NYP9 233 aa32.58■■■□□ 2.81
TSEN54-209ENST00000583454 CACNA1SQ13698 1873 aa32.58■■■□□ 2.81
TSEN54-209ENST00000583454 FER1L6Q2WGJ9 1857 aa32.58■■■□□ 2.81
TSEN54-209ENST00000583454 ARFGEF2Q9Y6D5 1785 aa32.58■■■□□ 2.81
TSEN54-209ENST00000583454 H0YIN7 160 aa32.57■■■□□ 2.8
TSEN54-209ENST00000583454 CCDC24Q8N4L8 307 aa32.56■■■□□ 2.8
TSEN54-209ENST00000583454 BRIP1Q9BX63 1249 aa32.56■■■□□ 2.8
TSEN54-209ENST00000583454 SNRPA1P09661 255 aaKnown RBP32.55■■■□□ 2.8
TSEN54-209ENST00000583454 DIEXFQ68CQ4 756 aaKnown RBP32.55■■■□□ 2.8
TSEN54-209ENST00000583454 DZIP3Q86Y13 1208 aaKnown RBP32.55■■■□□ 2.8
TSEN54-209ENST00000583454 DICER1Q9UPY3 1922 aaKnown RBP32.54■■■□□ 2.8
TSEN54-209ENST00000583454 SLX4Q8IY92 1834 aa32.54■■■□□ 2.8
TSEN54-209ENST00000583454 NBPF26B4DH59 902 aa32.53■■■□□ 2.8
TSEN54-209ENST00000583454 NFKBIEO00221 500 aa32.53■■■□□ 2.8
TSEN54-209ENST00000583454 NBPF10Q6P3W6 841 aaKnown RBP32.53■■■□□ 2.8
TSEN54-209ENST00000583454 NBPF15Q8N660 670 aa32.53■■■□□ 2.8
TSEN54-209ENST00000583454 BABAM1Q9NWV8 329 aa32.53■■■□□ 2.8
TSEN54-209ENST00000583454 CCER2I3L3R5 266 aa32.51■■■□□ 2.79
TSEN54-209ENST00000583454 SETDB2Q96T68 719 aa32.51■■■□□ 2.79
TSEN54-209ENST00000583454 KDM2BQ8NHM5 1336 aa32.51■■■□□ 2.79
TSEN54-209ENST00000583454 ZC3H4Q9UPT8 1303 aaKnown RBP32.51■■■□□ 2.79
TSEN54-209ENST00000583454 LMNB1P20700 586 aa32.5■■■□□ 2.79
TSEN54-209ENST00000583454 PDE6BP35913 854 aa32.5■■■□□ 2.79
TSEN54-209ENST00000583454 PDZRN3Q9UPQ7 1066 aa32.5■■■□□ 2.79
TSEN54-209ENST00000583454 WDR90Q96KV7 1748 aa32.49■■■□□ 2.79
TSEN54-209ENST00000583454 FAM9BQ8IZU0 186 aa32.49■■■□□ 2.79
TSEN54-209ENST00000583454 CNBD1Q8NA66 436 aa32.49■■■□□ 2.79
TSEN54-209ENST00000583454 NCBP3Q53F19 620 aaKnown RBP32.48■■■□□ 2.79
TSEN54-209ENST00000583454 NPM2Q86SE8 214 aaKnown RBP32.48■■■□□ 2.79
TSEN54-209ENST00000583454 RBM46Q8TBY0 533 aaKnown RBP32.48■■■□□ 2.79
TSEN54-209ENST00000583454 EIF4A1P60842 406 aaKnown RBP32.47■■■□□ 2.79
TSEN54-209ENST00000583454 CLEC4GQ6UXB4 293 aa32.47■■■□□ 2.79
TSEN54-209ENST00000583454 CHL1O00533 1208 aa32.46■■■□□ 2.79
TSEN54-209ENST00000583454 ZNF622Q969S3 477 aaKnown RBP eCLIP32.46■■■□□ 2.79
TSEN54-209ENST00000583454 TSPYL4Q9UJ04 414 aa32.46■■■□□ 2.79
TSEN54-209ENST00000583454 RRAGCQ9HB90 399 aa32.45■■■□□ 2.79
TSEN54-209ENST00000583454 APLP1P51693 650 aa32.44■■■□□ 2.78
TSEN54-209ENST00000583454 CCDC27Q2M243 656 aa32.44■■■□□ 2.78
TSEN54-209ENST00000583454 NUP98P52948 1817 aa32.44■■■□□ 2.78
TSEN54-209ENST00000583454 RGL2O15211 777 aa32.43■■■□□ 2.78
TSEN54-209ENST00000583454 SRGNP10124 158 aa32.43■■■□□ 2.78
TSEN54-209ENST00000583454 C21orf2O43822 256 aa32.42■■■□□ 2.78
TSEN54-209ENST00000583454 ST5P78524 1137 aa32.41■■■□□ 2.78
TSEN54-209ENST00000583454 STYK1Q6J9G0 422 aa32.41■■■□□ 2.78
TSEN54-209ENST00000583454 GLTPD2A6NH11 291 aa32.4■■■□□ 2.78
TSEN54-209ENST00000583454 CALD1Q05682 793 aaKnown RBP32.4■■■□□ 2.78
TSEN54-209ENST00000583454 DNAJC5GQ8N7S2 189 aa32.4■■■□□ 2.78
TSEN54-209ENST00000583454 CFAP44Q96MT7 982 aa32.4■■■□□ 2.78
TSEN54-209ENST00000583454 ZNF652Q9Y2D9 606 aa32.4■■■□□ 2.78
TSEN54-209ENST00000583454 ZNF853P0CG23 659 aa32.39■■■□□ 2.78
TSEN54-209ENST00000583454 ZNF219Q9P2Y4 722 aaPredicted RBP32.39■■■□□ 2.78
TSEN54-209ENST00000583454 LTBP3Q9NS15 1303 aa32.38■■■□□ 2.77
TSEN54-209ENST00000583454 HLFQ16534 295 aa32.38■■■□□ 2.77
TSEN54-209ENST00000583454 NBPF5PQ86XG9 351 aaPredicted RBP32.38■■■□□ 2.77
TSEN54-209ENST00000583454 C16orf71Q8IYS4 520 aaPredicted RBP32.38■■■□□ 2.77
TSEN54-209ENST00000583454 MIER1Q8N108 512 aa32.38■■■□□ 2.77
TSEN54-209ENST00000583454 FSTL1Q12841 308 aa32.37■■■□□ 2.77
TSEN54-209ENST00000583454 PRPF40BQ6NWY9 871 aaKnown RBP32.37■■■□□ 2.77
TSEN54-209ENST00000583454 WWC1Q8IX03 1113 aa32.37■■■□□ 2.77
TSEN54-209ENST00000583454 CNKSR1Q969H4 720 aa32.37■■■□□ 2.77
TSEN54-209ENST00000583454 MASTLQ96GX5 879 aa32.37■■■□□ 2.77
TSEN54-209ENST00000583454 LAS1LQ9Y4W2 734 aaKnown RBP32.37■■■□□ 2.77
TSEN54-209ENST00000583454 KLRG2A4D1S0 409 aaPredicted RBP32.36■■■□□ 2.77
TSEN54-209ENST00000583454 NPHP1O15259 732 aa32.36■■■□□ 2.77
TSEN54-209ENST00000583454 IFT57Q9NWB7 429 aa32.36■■■□□ 2.77
TSEN54-209ENST00000583454 NIP7Q9Y221 180 aaKnown RBP eCLIP32.36■■■□□ 2.77
TSEN54-209ENST00000583454 GNAI1P63096 354 aa32.34■■■□□ 2.77
TSEN54-209ENST00000583454 C7orf43Q8WVR3 580 aa32.34■■■□□ 2.77
TSEN54-209ENST00000583454 NGEFQ8N5V2 710 aa32.33■■■□□ 2.77
TSEN54-209ENST00000583454 PCNTO95613 3336 aa32.33■■■□□ 2.77
TSEN54-209ENST00000583454 POTECB2RU33 542 aa32.32■■■□□ 2.76
TSEN54-209ENST00000583454 MBIPQ9NS73 344 aa32.32■■■□□ 2.76
TSEN54-209ENST00000583454 TAOK3Q9H2K8 898 aa32.31■■■□□ 2.76
TSEN54-209ENST00000583454 VEGFAP15692 232 aaPredicted RBP32.3■■■□□ 2.76
TSEN54-209ENST00000583454 HTRA3P83110 453 aa32.3■■■□□ 2.76
TSEN54-209ENST00000583454 TPTE2Q6XPS3 522 aa32.3■■■□□ 2.76
TSEN54-209ENST00000583454 IL16Q14005 1332 aa32.28■■■□□ 2.76
TSEN54-209ENST00000583454 NPR1P16066 1061 aa32.28■■■□□ 2.76
TSEN54-209ENST00000583454 ERFEQ4G0M1 354 aa32.28■■■□□ 2.76
TSEN54-209ENST00000583454 TTLL7Q6ZT98 887 aa32.28■■■□□ 2.76
TSEN54-209ENST00000583454 MAP3K15Q6ZN16 1313 aa32.27■■■□□ 2.76
TSEN54-209ENST00000583454 FAM177BA6PVY3 158 aa32.27■■■□□ 2.76
TSEN54-209ENST00000583454 ERVV-1B6SEH8 477 aa32.27■■■□□ 2.76
TSEN54-209ENST00000583454 SMC1BQ8NDV3 1235 aa32.27■■■□□ 2.76
TSEN54-209ENST00000583454 SALL2Q9Y467 1007 aaPredicted RBP32.27■■■□□ 2.76
TSEN54-209ENST00000583454 ABCC12Q96J65 1359 aa32.27■■■□□ 2.76
TSEN54-209ENST00000583454 KRT24Q2M2I5 525 aa32.26■■■□□ 2.75
TSEN54-209ENST00000583454 SOGA3Q5TF21 947 aa32.26■■■□□ 2.75
TSEN54-209ENST00000583454 WDR63Q8IWG1 891 aa32.26■■■□□ 2.75
TSEN54-209ENST00000583454 LRP10Q7Z4F1 713 aa32.24■■■□□ 2.75
TSEN54-209ENST00000583454 SNED1Q8TER0 1413 aa32.24■■■□□ 2.75
TSEN54-209ENST00000583454 ERBB4Q15303 1308 aa32.24■■■□□ 2.75
TSEN54-209ENST00000583454 MYL6BP14649 208 aa32.23■■■□□ 2.75
TSEN54-209ENST00000583454 UBN2Q6ZU65 1347 aa32.23■■■□□ 2.75
TSEN54-209ENST00000583454 HOXB7P09629 217 aa32.22■■■□□ 2.75
TSEN54-209ENST00000583454 OLFM4Q6UX06 510 aa32.22■■■□□ 2.75
TSEN54-209ENST00000583454 RIC1Q4ADV7 1423 aa32.22■■■□□ 2.75
TSEN54-209ENST00000583454 IBTKQ9P2D0 1353 aaPredicted RBP32.21■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms