RNA–Protein interactions for RNA: ENST00000583361.1

PRKCA-204, Transcript of protein kinase C alpha, humanhuman

TSL 3

Gene PRKCA, Length 519 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-204ENST00000583361 CNBD1Q8NA66 436 aa10.35□□□□□ -0.75
PRKCA-204ENST00000583361 ATP10DQ9P241 1426 aa10.34□□□□□ -0.75
PRKCA-204ENST00000583361 NBPF26B4DH59 902 aa10.34□□□□□ -0.75
PRKCA-204ENST00000583361 NBPF10Q6P3W6 841 aaKnown RBP10.34□□□□□ -0.75
PRKCA-204ENST00000583361 NBPF5PQ86XG9 351 aaPredicted RBP10.34□□□□□ -0.75
PRKCA-204ENST00000583361 NBPF15Q8N660 670 aa10.34□□□□□ -0.75
PRKCA-204ENST00000583361 NECTIN2Q92692 538 aa10.34□□□□□ -0.75
PRKCA-204ENST00000583361 ZNF622Q969S3 477 aaKnown RBP eCLIP10.34□□□□□ -0.75
PRKCA-204ENST00000583361 ZNF219Q9P2Y4 722 aaPredicted RBP10.34□□□□□ -0.75
PRKCA-204ENST00000583361 NIP7Q9Y221 180 aaKnown RBP eCLIP10.34□□□□□ -0.75
PRKCA-204ENST00000583361 SENP3-EIF4A1A0A087X0R7 540 aa10.33□□□□□ -0.76
PRKCA-204ENST00000583361 KCNA3P22001 575 aa10.33□□□□□ -0.76
PRKCA-204ENST00000583361 PDE6BP35913 854 aa10.33□□□□□ -0.76
PRKCA-204ENST00000583361 PRR5LQ6MZQ0 368 aa10.33□□□□□ -0.76
PRKCA-204ENST00000583361 GPBP1L1Q9HC44 474 aaPredicted RBP10.33□□□□□ -0.76
PRKCA-204ENST00000583361 ANKRD36CQ5JPF3 1778 aa10.33□□□□□ -0.76
PRKCA-204ENST00000583361 ARFGEF2Q9Y6D5 1785 aa10.32□□□□□ -0.76
PRKCA-204ENST00000583361 APAF1O14727 1248 aa10.32□□□□□ -0.76
PRKCA-204ENST00000583361 CLEC4GQ6UXB4 293 aa10.32□□□□□ -0.76
PRKCA-204ENST00000583361 TTLL6Q8N841 843 aa10.32□□□□□ -0.76
PRKCA-204ENST00000583361 ZBTB3Q9H5J0 574 aa10.32□□□□□ -0.76
PRKCA-204ENST00000583361 SLX4Q8IY92 1834 aa10.31□□□□□ -0.76
PRKCA-204ENST00000583361 ANXA1P04083 346 aa10.31□□□□□ -0.76
PRKCA-204ENST00000583361 GPTP24298 496 aa10.31□□□□□ -0.76
PRKCA-204ENST00000583361 AIMP1Q12904 312 aaKnown RBP10.31□□□□□ -0.76
PRKCA-204ENST00000583361 HLFQ16534 295 aa10.31□□□□□ -0.76
PRKCA-204ENST00000583361 TTLL7Q6ZT98 887 aa10.31□□□□□ -0.76
PRKCA-204ENST00000583361 BRIP1Q9BX63 1249 aa10.31□□□□□ -0.76
PRKCA-204ENST00000583361 MRS2Q9HD23 443 aa10.31□□□□□ -0.76
PRKCA-204ENST00000583361 BABAM1Q9NWV8 329 aa10.31□□□□□ -0.76
PRKCA-204ENST00000583361 TRIM35Q9UPQ4 493 aa10.31□□□□□ -0.76
PRKCA-204ENST00000583361 DICER1Q9UPY3 1922 aaKnown RBP10.31□□□□□ -0.76
PRKCA-204ENST00000583361 MAP3K15Q6ZN16 1313 aa10.31□□□□□ -0.76
PRKCA-204ENST00000583361 TIAM2Q8IVF5 1701 aa10.3□□□□□ -0.76
PRKCA-204ENST00000583361 KRT24Q2M2I5 525 aa10.3□□□□□ -0.76
PRKCA-204ENST00000583361 CCDC184Q52MB2 194 aa10.3□□□□□ -0.76
PRKCA-204ENST00000583361 C9orf131Q5VYM1 1079 aa10.3□□□□□ -0.76
PRKCA-204ENST00000583361 TPTE2Q6XPS3 522 aa10.3□□□□□ -0.76
PRKCA-204ENST00000583361 RNF181Q9P0P0 153 aa10.3□□□□□ -0.76
PRKCA-204ENST00000583361 PDZRN3Q9UPQ7 1066 aa10.3□□□□□ -0.76
PRKCA-204ENST00000583361 ERBB4Q15303 1308 aa10.3□□□□□ -0.76
PRKCA-204ENST00000583361 FER1L6Q2WGJ9 1857 aa10.3□□□□□ -0.76
PRKCA-204ENST00000583361 RASSF7Q02833 373 aa10.29□□□□□ -0.76
PRKCA-204ENST00000583361 CALD1Q05682 793 aaKnown RBP10.29□□□□□ -0.76
PRKCA-204ENST00000583361 NYXQ9GZU5 481 aa10.29□□□□□ -0.76
PRKCA-204ENST00000583361 ADCY9O60503 1353 aa10.28□□□□□ -0.76
PRKCA-204ENST00000583361 ERVV-1B6SEH8 477 aa10.28□□□□□ -0.76
PRKCA-204ENST00000583361 CHL1O00533 1208 aa10.28□□□□□ -0.76
PRKCA-204ENST00000583361 C21orf2O43822 256 aa10.28□□□□□ -0.76
PRKCA-204ENST00000583361 HDGFL1Q5TGJ6 251 aa10.28□□□□□ -0.76
PRKCA-204ENST00000583361 CNKSR1Q969H4 720 aa10.28□□□□□ -0.76
PRKCA-204ENST00000583361 MASTLQ96GX5 879 aa10.28□□□□□ -0.76
PRKCA-204ENST00000583361 CFAP44Q96MT7 982 aa10.28□□□□□ -0.76
PRKCA-204ENST00000583361 TNRC6CQ9HCJ0 1690 aaKnown RBP10.28□□□□□ -0.76
PRKCA-204ENST00000583361 LAMB2P55268 1798 aa10.27□□□□□ -0.77
PRKCA-204ENST00000583361 ELL2O00472 640 aaPredicted RBP10.27□□□□□ -0.77
PRKCA-204ENST00000583361 C1QTNF8P60827 252 aa10.27□□□□□ -0.77
PRKCA-204ENST00000583361 GNAI1P63096 354 aa10.27□□□□□ -0.77
PRKCA-204ENST00000583361 PROSER3Q2NL68 480 aa10.27□□□□□ -0.77
PRKCA-204ENST00000583361 GIGYF2Q6Y7W6 1299 aaKnown RBP10.27□□□□□ -0.77
PRKCA-204ENST00000583361 NUTM1Q86Y26 1132 aa10.27□□□□□ -0.77
PRKCA-204ENST00000583361 MBIPQ9NS73 344 aa10.27□□□□□ -0.77
PRKCA-204ENST00000583361 CHPF2Q9P2E5 772 aa10.27□□□□□ -0.77
PRKCA-204ENST00000583361 SALL2Q9Y467 1007 aaPredicted RBP10.27□□□□□ -0.77
PRKCA-204ENST00000583361 RGL2O15211 777 aa10.26□□□□□ -0.77
PRKCA-204ENST00000583361 DUSP27Q5VZP5 1158 aa10.26□□□□□ -0.77
PRKCA-204ENST00000583361 STYK1Q6J9G0 422 aa10.26□□□□□ -0.77
PRKCA-204ENST00000583361 PRPF40BQ6NWY9 871 aaKnown RBP10.26□□□□□ -0.77
PRKCA-204ENST00000583361 COPS6Q7L5N1 327 aa10.26□□□□□ -0.77
PRKCA-204ENST00000583361 PPP1R42Q7Z4L9 355 aa10.26□□□□□ -0.77
PRKCA-204ENST00000583361 FAM9BQ8IZU0 186 aa10.26□□□□□ -0.77
PRKCA-204ENST00000583361 XAGE3Q8WTP9 111 aa10.26□□□□□ -0.77
PRKCA-204ENST00000583361 DDX21Q9NR30 783 aaKnown RBP eCLIP10.26□□□□□ -0.77
PRKCA-204ENST00000583361 SRGNP10124 158 aa10.25□□□□□ -0.77
PRKCA-204ENST00000583361 NPR1P16066 1061 aa10.25□□□□□ -0.77
PRKCA-204ENST00000583361 PDIA6Q15084 440 aa10.25□□□□□ -0.77
PRKCA-204ENST00000583361 ERFEQ4G0M1 354 aa10.25□□□□□ -0.77
PRKCA-204ENST00000583361 C16orf71Q8IYS4 520 aaPredicted RBP10.25□□□□□ -0.77
PRKCA-204ENST00000583361 RPGRQ92834 1020 aaKnown RBP10.25□□□□□ -0.77
PRKCA-204ENST00000583361 ZNF428Q96B54 188 aa10.25□□□□□ -0.77
PRKCA-204ENST00000583361 IFT57Q9NWB7 429 aa10.25□□□□□ -0.77
PRKCA-204ENST00000583361 DBF4Q9UBU7 674 aaPredicted RBP10.25□□□□□ -0.77
PRKCA-204ENST00000583361 UBN2Q6ZU65 1347 aa10.25□□□□□ -0.77
PRKCA-204ENST00000583361 TAF1P21675 1872 aa10.25□□□□□ -0.77
PRKCA-204ENST00000583361 ABCC12Q96J65 1359 aa10.25□□□□□ -0.77
PRKCA-204ENST00000583361 CACNA1FO60840 1977 aa10.25□□□□□ -0.77
PRKCA-204ENST00000583361 HOXB7P09629 217 aa10.24□□□□□ -0.77
PRKCA-204ENST00000583361 LMNB1P20700 586 aa10.24□□□□□ -0.77
PRKCA-204ENST00000583361 PARP10Q53GL7 1025 aa10.24□□□□□ -0.77
PRKCA-204ENST00000583361 HSP90AB3PQ58FF7 597 aa10.24□□□□□ -0.77
PRKCA-204ENST00000583361 SOGA3Q5TF21 947 aa10.24□□□□□ -0.77
PRKCA-204ENST00000583361 SUSD4Q5VX71 490 aa10.24□□□□□ -0.77
PRKCA-204ENST00000583361 KDM2BQ8NHM5 1336 aa10.24□□□□□ -0.77
PRKCA-204ENST00000583361 NFKBIEO00221 500 aa10.23□□□□□ -0.77
PRKCA-204ENST00000583361 TCERG1O14776 1098 aaKnown RBP10.23□□□□□ -0.77
PRKCA-204ENST00000583361 ALDH1B1P30837 517 aa10.23□□□□□ -0.77
PRKCA-204ENST00000583361 CCDC93Q567U6 631 aa10.23□□□□□ -0.77
PRKCA-204ENST00000583361 ZNF34Q8IZ26 560 aa10.23□□□□□ -0.77
PRKCA-204ENST00000583361 TSR2Q969E8 191 aaKnown RBP10.23□□□□□ -0.77
PRKCA-204ENST00000583361 UTP14AQ9BVJ6 771 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 302.8 ms