RNA–Protein interactions for RNA: ENST00000583153.2

PTPRM-214, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 713 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-214ENST00000583153 NGEFQ8N5V2 710 aa10.91□□□□□ -0.66
PTPRM-214ENST00000583153 PIM2Q9P1W9 311 aa10.91□□□□□ -0.66
PTPRM-214ENST00000583153 CACNA1SQ13698 1873 aa10.91□□□□□ -0.66
PTPRM-214ENST00000583153 ANP32CO43423 234 aa10.9□□□□□ -0.66
PTPRM-214ENST00000583153 GIGYF1O75420 1035 aaPredicted RBP10.9□□□□□ -0.66
PTPRM-214ENST00000583153 CHRNA5P30532 468 aa10.9□□□□□ -0.66
PTPRM-214ENST00000583153 EIF4A1P60842 406 aaKnown RBP10.9□□□□□ -0.66
PTPRM-214ENST00000583153 SETDB2Q96T68 719 aa10.9□□□□□ -0.66
PTPRM-214ENST00000583153 ARFGEF2Q9Y6D5 1785 aa10.9□□□□□ -0.67
PTPRM-214ENST00000583153 ARHGAP27Q6ZUM4 889 aa10.89□□□□□ -0.67
PTPRM-214ENST00000583153 ZNF652Q9Y2D9 606 aa10.89□□□□□ -0.67
PTPRM-214ENST00000583153 ATP10DQ9P241 1426 aa10.89□□□□□ -0.67
PTPRM-214ENST00000583153 SBF1O95248 1867 aa10.89□□□□□ -0.67
PTPRM-214ENST00000583153 NBPF26B4DH59 902 aa10.88□□□□□ -0.67
PTPRM-214ENST00000583153 CAMTA2O94983 1202 aa10.88□□□□□ -0.67
PTPRM-214ENST00000583153 MYL6BP14649 208 aa10.88□□□□□ -0.67
PTPRM-214ENST00000583153 EIF2S2P20042 333 aaKnown RBP10.88□□□□□ -0.67
PTPRM-214ENST00000583153 DALRD3Q5D0E6 543 aaKnown RBP10.88□□□□□ -0.67
PTPRM-214ENST00000583153 NBPF10Q6P3W6 841 aaKnown RBP10.88□□□□□ -0.67
PTPRM-214ENST00000583153 NBPF15Q8N660 670 aa10.88□□□□□ -0.67
PTPRM-214ENST00000583153 CARMIL3Q8ND23 1372 aa10.88□□□□□ -0.67
PTPRM-214ENST00000583153 TIAM2Q8IVF5 1701 aa10.87□□□□□ -0.67
PTPRM-214ENST00000583153 NUP98P52948 1817 aa10.87□□□□□ -0.67
PTPRM-214ENST00000583153 H0YIN7 160 aa10.87□□□□□ -0.67
PTPRM-214ENST00000583153 APAF1O14727 1248 aa10.87□□□□□ -0.67
PTPRM-214ENST00000583153 KCNA3P22001 575 aa10.87□□□□□ -0.67
PTPRM-214ENST00000583153 C2CD5Q86YS7 1000 aa10.87□□□□□ -0.67
PTPRM-214ENST00000583153 CCDC24Q8N4L8 307 aa10.87□□□□□ -0.67
PTPRM-214ENST00000583153 BABAM1Q9NWV8 329 aa10.87□□□□□ -0.67
PTPRM-214ENST00000583153 FAM177BA6PVY3 158 aa10.86□□□□□ -0.67
PTPRM-214ENST00000583153 GTF2E1P29083 439 aaPredicted RBP10.86□□□□□ -0.67
PTPRM-214ENST00000583153 PDE6BP35913 854 aa10.86□□□□□ -0.67
PTPRM-214ENST00000583153 ST5P78524 1137 aa10.86□□□□□ -0.67
PTPRM-214ENST00000583153 CLEC4GQ6UXB4 293 aa10.86□□□□□ -0.67
PTPRM-214ENST00000583153 KIF6Q6ZMV9 814 aa10.86□□□□□ -0.67
PTPRM-214ENST00000583153 NBPF5PQ86XG9 351 aaPredicted RBP10.86□□□□□ -0.67
PTPRM-214ENST00000583153 CNBD1Q8NA66 436 aa10.86□□□□□ -0.67
PTPRM-214ENST00000583153 TRIM35Q9UPQ4 493 aa10.86□□□□□ -0.67
PTPRM-214ENST00000583153 NIP7Q9Y221 180 aaKnown RBP eCLIP10.86□□□□□ -0.67
PTPRM-214ENST00000583153 CCDC88AQ3V6T2 1871 aa10.85□□□□□ -0.67
PTPRM-214ENST00000583153 PRR5LQ6MZQ0 368 aa10.85□□□□□ -0.67
PTPRM-214ENST00000583153 ZNF526Q8TF50 670 aaPredicted RBP10.85□□□□□ -0.67
PTPRM-214ENST00000583153 NECTIN2Q92692 538 aa10.85□□□□□ -0.67
PTPRM-214ENST00000583153 ZNF622Q969S3 477 aaKnown RBP eCLIP10.85□□□□□ -0.67
PTPRM-214ENST00000583153 BRIP1Q9BX63 1249 aa10.85□□□□□ -0.67
PTPRM-214ENST00000583153 MRS2Q9HD23 443 aa10.85□□□□□ -0.67
PTPRM-214ENST00000583153 CHL1O00533 1208 aa10.84□□□□□ -0.67
PTPRM-214ENST00000583153 HLFQ16534 295 aa10.84□□□□□ -0.67
PTPRM-214ENST00000583153 CCDC184Q52MB2 194 aa10.84□□□□□ -0.67
PTPRM-214ENST00000583153 TPTE2Q6XPS3 522 aa10.84□□□□□ -0.67
PTPRM-214ENST00000583153 TTLL6Q8N841 843 aa10.84□□□□□ -0.67
PTPRM-214ENST00000583153 TNRC6CQ9HCJ0 1690 aaKnown RBP10.84□□□□□ -0.67
PTPRM-214ENST00000583153 ANKRD36CQ5JPF3 1778 aa10.84□□□□□ -0.67
PTPRM-214ENST00000583153 FER1L6Q2WGJ9 1857 aa10.84□□□□□ -0.67
PTPRM-214ENST00000583153 SENP3-EIF4A1A0A087X0R7 540 aa10.83□□□□□ -0.68
PTPRM-214ENST00000583153 CALD1Q05682 793 aaKnown RBP10.83□□□□□ -0.68
PTPRM-214ENST00000583153 TTLL7Q6ZT98 887 aa10.83□□□□□ -0.68
PTPRM-214ENST00000583153 ZBTB3Q9H5J0 574 aa10.83□□□□□ -0.68
PTPRM-214ENST00000583153 GPBP1L1Q9HC44 474 aaPredicted RBP10.83□□□□□ -0.68
PTPRM-214ENST00000583153 PDZRN3Q9UPQ7 1066 aa10.83□□□□□ -0.68
PTPRM-214ENST00000583153 ERBB4Q15303 1308 aa10.83□□□□□ -0.68
PTPRM-214ENST00000583153 MAP3K15Q6ZN16 1313 aa10.83□□□□□ -0.68
PTPRM-214ENST00000583153 DICER1Q9UPY3 1922 aaKnown RBP10.82□□□□□ -0.68
PTPRM-214ENST00000583153 ERVV-1B6SEH8 477 aa10.82□□□□□ -0.68
PTPRM-214ENST00000583153 ANXA1P04083 346 aa10.82□□□□□ -0.68
PTPRM-214ENST00000583153 GPTP24298 496 aa10.82□□□□□ -0.68
PTPRM-214ENST00000583153 AIMP1Q12904 312 aaKnown RBP10.82□□□□□ -0.68
PTPRM-214ENST00000583153 KRT24Q2M2I5 525 aa10.82□□□□□ -0.68
PTPRM-214ENST00000583153 CFAP44Q96MT7 982 aa10.82□□□□□ -0.68
PTPRM-214ENST00000583153 RGL2O15211 777 aa10.81□□□□□ -0.68
PTPRM-214ENST00000583153 C9orf131Q5VYM1 1079 aa10.81□□□□□ -0.68
PTPRM-214ENST00000583153 SLX4Q8IY92 1834 aa10.81□□□□□ -0.68
PTPRM-214ENST00000583153 ELL2O00472 640 aaPredicted RBP10.8□□□□□ -0.68
PTPRM-214ENST00000583153 GNAI1P63096 354 aa10.8□□□□□ -0.68
PTPRM-214ENST00000583153 HDGFL1Q5TGJ6 251 aa10.8□□□□□ -0.68
PTPRM-214ENST00000583153 DUSP27Q5VZP5 1158 aa10.8□□□□□ -0.68
PTPRM-214ENST00000583153 COPS6Q7L5N1 327 aa10.8□□□□□ -0.68
PTPRM-214ENST00000583153 CNKSR1Q969H4 720 aa10.8□□□□□ -0.68
PTPRM-214ENST00000583153 NYXQ9GZU5 481 aa10.8□□□□□ -0.68
PTPRM-214ENST00000583153 MBIPQ9NS73 344 aa10.8□□□□□ -0.68
PTPRM-214ENST00000583153 FOXD4L1Q9NU39 408 aa10.8□□□□□ -0.68
PTPRM-214ENST00000583153 RNF181Q9P0P0 153 aa10.8□□□□□ -0.68
PTPRM-214ENST00000583153 C21orf2O43822 256 aa10.79□□□□□ -0.68
PTPRM-214ENST00000583153 C1QTNF8P60827 252 aa10.79□□□□□ -0.68
PTPRM-214ENST00000583153 PDIA6Q15084 440 aa10.79□□□□□ -0.68
PTPRM-214ENST00000583153 PROSER3Q2NL68 480 aa10.79□□□□□ -0.68
PTPRM-214ENST00000583153 STYK1Q6J9G0 422 aa10.79□□□□□ -0.68
PTPRM-214ENST00000583153 GIGYF2Q6Y7W6 1299 aaKnown RBP10.79□□□□□ -0.68
PTPRM-214ENST00000583153 NUTM1Q86Y26 1132 aa10.79□□□□□ -0.68
PTPRM-214ENST00000583153 XAGE3Q8WTP9 111 aa10.79□□□□□ -0.68
PTPRM-214ENST00000583153 MASTLQ96GX5 879 aa10.79□□□□□ -0.68
PTPRM-214ENST00000583153 DDX21Q9NR30 783 aaKnown RBP eCLIP10.79□□□□□ -0.68
PTPRM-214ENST00000583153 IFT57Q9NWB7 429 aa10.79□□□□□ -0.68
PTPRM-214ENST00000583153 CHPF2Q9P2E5 772 aa10.79□□□□□ -0.68
PTPRM-214ENST00000583153 SALL2Q9Y467 1007 aaPredicted RBP10.79□□□□□ -0.68
PTPRM-214ENST00000583153 CEP350Q5VT06 3117 aa10.79□□□□□ -0.68
PTPRM-214ENST00000583153 LAMB2P55268 1798 aa10.78□□□□□ -0.68
PTPRM-214ENST00000583153 SRGNP10124 158 aa10.78□□□□□ -0.68
PTPRM-214ENST00000583153 NPR1P16066 1061 aa10.78□□□□□ -0.68
PTPRM-214ENST00000583153 RASSF7Q02833 373 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms