RNA–Protein interactions for RNA: ENST00000582933.5

PPP4R1-223, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-223ENST00000582933 RRP7AQ9Y3A4 280 aaKnown RBP7.79□□□□□ -1.16
PPP4R1-223ENST00000582933 TUBGCP6Q96RT7 1819 aa7.79□□□□□ -1.16
PPP4R1-223ENST00000582933 HEG1Q9ULI3 1381 aa7.79□□□□□ -1.16
PPP4R1-223ENST00000582933 KDM3BQ7LBC6 1761 aa7.79□□□□□ -1.16
PPP4R1-223ENST00000582933 VIRMAQ69YN4 1812 aaKnown RBP7.78□□□□□ -1.16
PPP4R1-223ENST00000582933 SSFA2P28290 1259 aa7.78□□□□□ -1.16
PPP4R1-223ENST00000582933 CRKLP46109 303 aaKnown RBP7.78□□□□□ -1.16
PPP4R1-223ENST00000582933 TAF7Q15545 349 aaPredicted RBP7.78□□□□□ -1.16
PPP4R1-223ENST00000582933 RC3H1Q5TC82 1133 aaKnown RBP7.78□□□□□ -1.16
PPP4R1-223ENST00000582933 FLAD1Q8NFF5 587 aa7.78□□□□□ -1.16
PPP4R1-223ENST00000582933 FMNL2Q96PY5 1086 aa7.78□□□□□ -1.16
PPP4R1-223ENST00000582933 TRIM35Q9UPQ4 493 aa7.78□□□□□ -1.16
PPP4R1-223ENST00000582933 KAT6BQ8WYB5 2073 aa7.77□□□□□ -1.17
PPP4R1-223ENST00000582933 UBR3Q6ZT12 1888 aa7.77□□□□□ -1.17
PPP4R1-223ENST00000582933 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.77□□□□□ -1.17
PPP4R1-223ENST00000582933 APAF1O14727 1248 aa7.77□□□□□ -1.17
PPP4R1-223ENST00000582933 ZBTB7AO95365 584 aa7.77□□□□□ -1.17
PPP4R1-223ENST00000582933 CYP19A1P11511 503 aaPredicted RBP7.77□□□□□ -1.17
PPP4R1-223ENST00000582933 FAM193AP78312 1265 aa7.77□□□□□ -1.17
PPP4R1-223ENST00000582933 DNAJC10Q8IXB1 793 aa7.77□□□□□ -1.17
PPP4R1-223ENST00000582933 FAM43AQ8N2R8 423 aa7.77□□□□□ -1.17
PPP4R1-223ENST00000582933 SLC16A10Q8TF71 515 aa7.77□□□□□ -1.17
PPP4R1-223ENST00000582933 ZNF622Q969S3 477 aaKnown RBP eCLIP7.77□□□□□ -1.17
PPP4R1-223ENST00000582933 MTFR1LQ9H019 292 aa7.77□□□□□ -1.17
PPP4R1-223ENST00000582933 CCDC87Q9NVE4 849 aa7.77□□□□□ -1.17
PPP4R1-223ENST00000582933 DLG5Q8TDM6 1919 aa7.77□□□□□ -1.17
PPP4R1-223ENST00000582933 SPDYE2BA6NHP3 402 aa7.76□□□□□ -1.17
PPP4R1-223ENST00000582933 CCER2I3L3R5 266 aa7.76□□□□□ -1.17
PPP4R1-223ENST00000582933 KCNQ3O43525 872 aa7.76□□□□□ -1.17
PPP4R1-223ENST00000582933 PHF14O94880 888 aa7.76□□□□□ -1.17
PPP4R1-223ENST00000582933 STARD3NLO95772 234 aa7.76□□□□□ -1.17
PPP4R1-223ENST00000582933 SPDYE6P0CI01 402 aa7.76□□□□□ -1.17
PPP4R1-223ENST00000582933 NEUROD2Q15784 382 aa7.76□□□□□ -1.17
PPP4R1-223ENST00000582933 SPDYE2Q495Y8 402 aa7.76□□□□□ -1.17
PPP4R1-223ENST00000582933 AXDND1Q5T1B0 1012 aaPredicted RBP7.76□□□□□ -1.17
PPP4R1-223ENST00000582933 INTS5Q6P9B9 1019 aaKnown RBP7.76□□□□□ -1.17
PPP4R1-223ENST00000582933 COL23A1Q86Y22 540 aaPredicted RBP7.76□□□□□ -1.17
PPP4R1-223ENST00000582933 IFNLR1Q8IU57 520 aaPredicted RBP7.76□□□□□ -1.17
PPP4R1-223ENST00000582933 TEX13AQ9BXU3 409 aaPredicted RBP7.76□□□□□ -1.17
PPP4R1-223ENST00000582933 SPON1Q9HCB6 807 aa7.76□□□□□ -1.17
PPP4R1-223ENST00000582933 BABAM1Q9NWV8 329 aa7.76□□□□□ -1.17
PPP4R1-223ENST00000582933 RTCBQ9Y3I0 505 aaKnown RBP7.76□□□□□ -1.17
PPP4R1-223ENST00000582933 LAMB4A4D0S4 1761 aa7.76□□□□□ -1.17
PPP4R1-223ENST00000582933 SOS1Q07889 1333 aaPredicted RBP7.76□□□□□ -1.17
PPP4R1-223ENST00000582933 C4AP0C0L4 1744 aa7.75□□□□□ -1.17
PPP4R1-223ENST00000582933 COL15A1P39059 1388 aa7.75□□□□□ -1.17
PPP4R1-223ENST00000582933 RPS6KA4O75676 772 aa7.75□□□□□ -1.17
PPP4R1-223ENST00000582933 SNRPA1P09661 255 aaKnown RBP7.75□□□□□ -1.17
PPP4R1-223ENST00000582933 PTGER2P43116 358 aa7.75□□□□□ -1.17
PPP4R1-223ENST00000582933 MMP14P50281 582 aa7.75□□□□□ -1.17
PPP4R1-223ENST00000582933 CCDC27Q2M243 656 aa7.75□□□□□ -1.17
PPP4R1-223ENST00000582933 SGIP1Q9BQI5 828 aa7.75□□□□□ -1.17
PPP4R1-223ENST00000582933 KCNG1Q9UIX4 513 aa7.75□□□□□ -1.17
PPP4R1-223ENST00000582933 TSPYL4Q9UJ04 414 aa7.75□□□□□ -1.17
PPP4R1-223ENST00000582933 SSUH2Q9Y2M2 353 aa7.75□□□□□ -1.17
PPP4R1-223ENST00000582933 COL24A1Q17RW2 1714 aa7.75□□□□□ -1.17
PPP4R1-223ENST00000582933 SCN7AQ01118 1682 aa7.74□□□□□ -1.17
PPP4R1-223ENST00000582933 CHL1O00533 1208 aa7.74□□□□□ -1.17
PPP4R1-223ENST00000582933 PITPNM1O00562 1244 aa7.74□□□□□ -1.17
PPP4R1-223ENST00000582933 EIF4A1P60842 406 aaKnown RBP7.74□□□□□ -1.17
PPP4R1-223ENST00000582933 TMED8Q6PL24 325 aaPredicted RBP7.74□□□□□ -1.17
PPP4R1-223ENST00000582933 SMIM5Q71RC9 77 aa7.74□□□□□ -1.17
PPP4R1-223ENST00000582933 DNAJC2Q99543 621 aaKnown RBP7.74□□□□□ -1.17
PPP4R1-223ENST00000582933 IFT57Q9NWB7 429 aa7.74□□□□□ -1.17
PPP4R1-223ENST00000582933 MIS18AQ9NYP9 233 aa7.74□□□□□ -1.17
PPP4R1-223ENST00000582933 ZBTB1Q9Y2K1 713 aa7.74□□□□□ -1.17
PPP4R1-223ENST00000582933 USP42Q9H9J4 1324 aaKnown RBP7.74□□□□□ -1.17
PPP4R1-223ENST00000582933 PRAMEF22A3QJZ6 481 aa7.73□□□□□ -1.17
PPP4R1-223ENST00000582933 GIGYF1O75420 1035 aaPredicted RBP7.73□□□□□ -1.17
PPP4R1-223ENST00000582933 HSP90AA1P07900 732 aaKnown RBP7.73□□□□□ -1.17
PPP4R1-223ENST00000582933 ZNF853P0CG23 659 aa7.73□□□□□ -1.17
PPP4R1-223ENST00000582933 TRAPPC3LQ5T215 181 aa7.73□□□□□ -1.17
PPP4R1-223ENST00000582933 MSL1Q68DK7 614 aa7.73□□□□□ -1.17
PPP4R1-223ENST00000582933 CERS3Q8IU89 383 aa7.73□□□□□ -1.17
PPP4R1-223ENST00000582933 FAM9BQ8IZU0 186 aa7.73□□□□□ -1.17
PPP4R1-223ENST00000582933 NGEFQ8N5V2 710 aa7.73□□□□□ -1.17
PPP4R1-223ENST00000582933 MYH14Q7Z406 1995 aaKnown RBP7.73□□□□□ -1.17
PPP4R1-223ENST00000582933 IL16Q14005 1332 aa7.73□□□□□ -1.17
PPP4R1-223ENST00000582933 MAFGO15525 162 aa7.72□□□□□ -1.17
PPP4R1-223ENST00000582933 POTEIP0CG38 1075 aa7.72□□□□□ -1.17
PPP4R1-223ENST00000582933 POLD1P28340 1107 aa7.72□□□□□ -1.17
PPP4R1-223ENST00000582933 RFC4P35249 363 aa7.72□□□□□ -1.17
PPP4R1-223ENST00000582933 IL6STP40189 918 aaPredicted RBP7.72□□□□□ -1.17
PPP4R1-223ENST00000582933 EIF5P55010 431 aaKnown RBP7.72□□□□□ -1.17
PPP4R1-223ENST00000582933 ARHGEF1Q92888 912 aaKnown RBP7.72□□□□□ -1.17
PPP4R1-223ENST00000582933 MBIPQ9NS73 344 aa7.72□□□□□ -1.17
PPP4R1-223ENST00000582933 ERBB4Q15303 1308 aa7.72□□□□□ -1.17
PPP4R1-223ENST00000582933 C19orf67A6NJJ6 358 aa7.71□□□□□ -1.18
PPP4R1-223ENST00000582933 NBPF26B4DH59 902 aa7.71□□□□□ -1.18
PPP4R1-223ENST00000582933 HOXB7P09629 217 aa7.71□□□□□ -1.18
PPP4R1-223ENST00000582933 GYS1P13807 737 aa7.71□□□□□ -1.18
PPP4R1-223ENST00000582933 GNAI1P63096 354 aa7.71□□□□□ -1.18
PPP4R1-223ENST00000582933 NBPF10Q6P3W6 841 aaKnown RBP7.71□□□□□ -1.18
PPP4R1-223ENST00000582933 NBPF15Q8N660 670 aa7.71□□□□□ -1.18
PPP4R1-223ENST00000582933 RGS22Q8NE09 1264 aa7.71□□□□□ -1.18
PPP4R1-223ENST00000582933 PPP1R1BQ9UD71 204 aaPredicted RBP7.71□□□□□ -1.18
PPP4R1-223ENST00000582933 USP16Q9Y5T5 823 aa7.71□□□□□ -1.18
PPP4R1-223ENST00000582933 C10orf71Q711Q0 1435 aa7.7□□□□□ -1.18
PPP4R1-223ENST00000582933 A0A087WZG4 1122 aa7.7□□□□□ -1.18
PPP4R1-223ENST00000582933 RGL2O15211 777 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms