RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 CRKLP46109 303 aaKnown RBP17.4■□□□□ 0.38
CSNK1D-220ENST00000581737 CHMP4AQ9BY43 222 aa17.4■□□□□ 0.38
CSNK1D-220ENST00000581737 RNF181Q9P0P0 153 aa17.4■□□□□ 0.38
CSNK1D-220ENST00000581737 PIM2Q9P1W9 311 aa17.4■□□□□ 0.38
CSNK1D-220ENST00000581737 SOS1Q07889 1333 aaPredicted RBP17.4■□□□□ 0.38
CSNK1D-220ENST00000581737 E9PSI1 815 aa17.39■□□□□ 0.37
CSNK1D-220ENST00000581737 PRELPP51888 382 aa17.39■□□□□ 0.37
CSNK1D-220ENST00000581737 DALRD3Q5D0E6 543 aaKnown RBP17.39■□□□□ 0.37
CSNK1D-220ENST00000581737 FANCIQ9NVI1 1328 aa17.39■□□□□ 0.37
CSNK1D-220ENST00000581737 FSTL1Q12841 308 aa17.38■□□□□ 0.37
CSNK1D-220ENST00000581737 USP42Q9H9J4 1324 aaKnown RBP17.38■□□□□ 0.37
CSNK1D-220ENST00000581737 C16orf71Q8IYS4 520 aaPredicted RBP17.37■□□□□ 0.37
CSNK1D-220ENST00000581737 TSR2Q969E8 191 aaKnown RBP17.37■□□□□ 0.37
CSNK1D-220ENST00000581737 ERBB4Q15303 1308 aa17.37■□□□□ 0.37
CSNK1D-220ENST00000581737 POLRMTO00411 1230 aaKnown RBP17.36■□□□□ 0.37
CSNK1D-220ENST00000581737 RASSF7Q02833 373 aa17.36■□□□□ 0.37
CSNK1D-220ENST00000581737 INTS5Q6P9B9 1019 aaKnown RBP17.36■□□□□ 0.37
CSNK1D-220ENST00000581737 NPM2Q86SE8 214 aaKnown RBP17.36■□□□□ 0.37
CSNK1D-220ENST00000581737 TM4SF1P30408 202 aa17.35■□□□□ 0.37
CSNK1D-220ENST00000581737 DUSP27Q5VZP5 1158 aa17.35■□□□□ 0.37
CSNK1D-220ENST00000581737 USP16Q9Y5T5 823 aa17.35■□□□□ 0.37
CSNK1D-220ENST00000581737 KDM2BQ8NHM5 1336 aa17.35■□□□□ 0.37
CSNK1D-220ENST00000581737 PRAMEF22A3QJZ6 481 aa17.34■□□□□ 0.37
CSNK1D-220ENST00000581737 ERICH6BQ5W0A0 696 aa17.34■□□□□ 0.37
CSNK1D-220ENST00000581737 ZBTB1Q9Y2K1 713 aa17.34■□□□□ 0.37
CSNK1D-220ENST00000581737 ARFGEF1Q9Y6D6 1849 aa17.34■□□□□ 0.37
CSNK1D-220ENST00000581737 CANXP27824 592 aaKnown RBP17.33■□□□□ 0.36
CSNK1D-220ENST00000581737 IL6STP40189 918 aaPredicted RBP17.33■□□□□ 0.36
CSNK1D-220ENST00000581737 SLFN5Q08AF3 891 aa17.33■□□□□ 0.36
CSNK1D-220ENST00000581737 KRT24Q2M2I5 525 aa17.33■□□□□ 0.36
CSNK1D-220ENST00000581737 HDGFL1Q5TGJ6 251 aa17.33■□□□□ 0.36
CSNK1D-220ENST00000581737 COL15A1P39059 1388 aa17.32■□□□□ 0.36
CSNK1D-220ENST00000581737 A0A087WZG4 1122 aa17.32■□□□□ 0.36
CSNK1D-220ENST00000581737 A1BGP04217 495 aa17.32■□□□□ 0.36
CSNK1D-220ENST00000581737 EIF2S2P20042 333 aaKnown RBP17.32■□□□□ 0.36
CSNK1D-220ENST00000581737 SPINK5Q9NQ38 1064 aaPredicted RBP17.32■□□□□ 0.36
CSNK1D-220ENST00000581737 TWISTNBQ3B726 338 aaPredicted RBP17.31■□□□□ 0.36
CSNK1D-220ENST00000581737 USPL1Q5W0Q7 1092 aa17.31■□□□□ 0.36
CSNK1D-220ENST00000581737 TNS4Q8IZW8 715 aa17.31■□□□□ 0.36
CSNK1D-220ENST00000581737 C8orf58Q8NAV2 365 aa17.31■□□□□ 0.36
CSNK1D-220ENST00000581737 EIF5P55010 431 aaKnown RBP17.3■□□□□ 0.36
CSNK1D-220ENST00000581737 EXOSC9Q06265 439 aaKnown RBP17.3■□□□□ 0.36
CSNK1D-220ENST00000581737 SMC1BQ8NDV3 1235 aa17.3■□□□□ 0.36
CSNK1D-220ENST00000581737 CACNA1FO60840 1977 aa17.29■□□□□ 0.36
CSNK1D-220ENST00000581737 ELL2O00472 640 aaPredicted RBP17.29■□□□□ 0.36
CSNK1D-220ENST00000581737 NFIXQ14938 502 aa17.29■□□□□ 0.36
CSNK1D-220ENST00000581737 CCDC30Q5VVM6 783 aa17.29■□□□□ 0.36
CSNK1D-220ENST00000581737 BCL2L12Q9HB09 334 aa17.29■□□□□ 0.36
CSNK1D-220ENST00000581737 DBF4Q9UBU7 674 aaPredicted RBP17.29■□□□□ 0.36
CSNK1D-220ENST00000581737 ZNF330Q9Y3S2 320 aaPredicted RBP17.29■□□□□ 0.36
CSNK1D-220ENST00000581737 NBPF26B4DH59 902 aa17.28■□□□□ 0.36
CSNK1D-220ENST00000581737 NBPF10Q6P3W6 841 aaKnown RBP17.28■□□□□ 0.36
CSNK1D-220ENST00000581737 TRMT2AQ8IZ69 625 aaKnown RBP17.28■□□□□ 0.36
CSNK1D-220ENST00000581737 NBPF15Q8N660 670 aa17.28■□□□□ 0.36
CSNK1D-220ENST00000581737 TSPYL6Q8N831 410 aa17.28■□□□□ 0.36
CSNK1D-220ENST00000581737 CDCA7LQ96GN5 454 aa17.28■□□□□ 0.36
CSNK1D-220ENST00000581737 DDX21Q9NR30 783 aaKnown RBP eCLIP17.28■□□□□ 0.36
CSNK1D-220ENST00000581737 SCN7AQ01118 1682 aa17.28■□□□□ 0.36
CSNK1D-220ENST00000581737 TNRC6CQ9HCJ0 1690 aaKnown RBP17.27■□□□□ 0.36
CSNK1D-220ENST00000581737 POTECB2RU33 542 aa17.27■□□□□ 0.36
CSNK1D-220ENST00000581737 ZPR1O75312 459 aa17.27■□□□□ 0.36
CSNK1D-220ENST00000581737 NECTIN2Q92692 538 aa17.27■□□□□ 0.36
CSNK1D-220ENST00000581737 STK31Q9BXU1 1019 aa17.27■□□□□ 0.36
CSNK1D-220ENST00000581737 CARMIL3Q8ND23 1372 aa17.27■□□□□ 0.35
CSNK1D-220ENST00000581737 SBF1O95248 1867 aa17.27■□□□□ 0.35
CSNK1D-220ENST00000581737 BCORQ6W2J9 1755 aa17.26■□□□□ 0.35
CSNK1D-220ENST00000581737 GLTPD2A6NH11 291 aa17.26■□□□□ 0.35
CSNK1D-220ENST00000581737 CT47B1P0C2W7 299 aaPredicted RBP17.26■□□□□ 0.35
CSNK1D-220ENST00000581737 HSPA1AP0DMV8 641 aaKnown RBP17.26■□□□□ 0.35
CSNK1D-220ENST00000581737 HSPA1BP0DMV9 641 aaKnown RBP17.26■□□□□ 0.35
CSNK1D-220ENST00000581737 MYL6BP14649 208 aa17.26■□□□□ 0.35
CSNK1D-220ENST00000581737 ZNF428Q96B54 188 aa17.26■□□□□ 0.35
CSNK1D-220ENST00000581737 HYPKQ9NX55 129 aa17.26■□□□□ 0.35
CSNK1D-220ENST00000581737 CHPF2Q9P2E5 772 aa17.26■□□□□ 0.35
CSNK1D-220ENST00000581737 NARFQ9UHQ1 456 aa17.26■□□□□ 0.35
CSNK1D-220ENST00000581737 SUPT16HQ9Y5B9 1047 aaKnown RBP17.26■□□□□ 0.35
CSNK1D-220ENST00000581737 NFKBIEO00221 500 aa17.25■□□□□ 0.35
CSNK1D-220ENST00000581737 RGL2O15211 777 aa17.25■□□□□ 0.35
CSNK1D-220ENST00000581737 LMNB1P20700 586 aa17.25■□□□□ 0.35
CSNK1D-220ENST00000581737 PIP4K2AP48426 406 aaPredicted RBP17.25■□□□□ 0.35
CSNK1D-220ENST00000581737 KIF6Q6ZMV9 814 aa17.25■□□□□ 0.35
CSNK1D-220ENST00000581737 DZIP3Q86Y13 1208 aaKnown RBP17.25■□□□□ 0.35
CSNK1D-220ENST00000581737 VAMP4O75379 141 aa17.24■□□□□ 0.35
CSNK1D-220ENST00000581737 VEGFAP15692 232 aaPredicted RBP17.24■□□□□ 0.35
CSNK1D-220ENST00000581737 PDIA6Q15084 440 aa17.24■□□□□ 0.35
CSNK1D-220ENST00000581737 ZNF652Q9Y2D9 606 aa17.23■□□□□ 0.35
CSNK1D-220ENST00000581737 ZC3H4Q9UPT8 1303 aaKnown RBP17.22■□□□□ 0.35
CSNK1D-220ENST00000581737 SERPINB2P05120 415 aa17.22■□□□□ 0.35
CSNK1D-220ENST00000581737 PROSER3Q2NL68 480 aa17.22■□□□□ 0.35
CSNK1D-220ENST00000581737 C2CD5Q86YS7 1000 aa17.22■□□□□ 0.35
CSNK1D-220ENST00000581737 TBC1D2BQ9UPU7 963 aa17.22■□□□□ 0.35
CSNK1D-220ENST00000581737 ANXA1P04083 346 aa17.21■□□□□ 0.35
CSNK1D-220ENST00000581737 LRP10Q7Z4F1 713 aa17.21■□□□□ 0.35
CSNK1D-220ENST00000581737 TTLL6Q8N841 843 aa17.21■□□□□ 0.35
CSNK1D-220ENST00000581737 NRXN2Q9P2S2 1712 aa17.21■□□□□ 0.35
CSNK1D-220ENST00000581737 MAP3K15Q6ZN16 1313 aa17.21■□□□□ 0.34
CSNK1D-220ENST00000581737 AFDNP55196 1824 aaKnown RBP17.2■□□□□ 0.34
CSNK1D-220ENST00000581737 ERVV-1B6SEH8 477 aa17.2■□□□□ 0.34
CSNK1D-220ENST00000581737 CAMTA2O94983 1202 aa17.2■□□□□ 0.34
CSNK1D-220ENST00000581737 CLEC4GQ6UXB4 293 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms