RNA–Protein interactions for RNA: ENST00000580997.1

SENP3-204, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-204ENST00000580997 EIF4A1P60842 406 aaKnown RBP16.48■□□□□ 0.23
SENP3-204ENST00000580997 MYBBP1AQ9BQG0 1328 aaKnown RBP16.47■□□□□ 0.23
SENP3-204ENST00000580997 DLEC1Q9Y238 1755 aa16.47■□□□□ 0.23
SENP3-204ENST00000580997 CNBD1Q8NA66 436 aa16.47■□□□□ 0.23
SENP3-204ENST00000580997 THUMPD2Q9BTF0 503 aaKnown RBP16.47■□□□□ 0.23
SENP3-204ENST00000580997 ZNF652Q9Y2D9 606 aa16.47■□□□□ 0.23
SENP3-204ENST00000580997 DLG5Q8TDM6 1919 aa16.47■□□□□ 0.23
SENP3-204ENST00000580997 BCORQ6W2J9 1755 aa16.46■□□□□ 0.22
SENP3-204ENST00000580997 RIPK4P57078 832 aa16.45■□□□□ 0.22
SENP3-204ENST00000580997 CCDC24Q8N4L8 307 aa16.45■□□□□ 0.22
SENP3-204ENST00000580997 BABAM1Q9NWV8 329 aa16.45■□□□□ 0.22
SENP3-204ENST00000580997 RNF181Q9P0P0 153 aa16.45■□□□□ 0.22
SENP3-204ENST00000580997 ANKRD31Q8N7Z5 1873 aa16.44■□□□□ 0.22
SENP3-204ENST00000580997 KDM3BQ7LBC6 1761 aa16.44■□□□□ 0.22
SENP3-204ENST00000580997 KLRG2A4D1S0 409 aaPredicted RBP16.44■□□□□ 0.22
SENP3-204ENST00000580997 TOMM70O94826 608 aa16.44■□□□□ 0.22
SENP3-204ENST00000580997 SRGNP10124 158 aa16.44■□□□□ 0.22
SENP3-204ENST00000580997 TMPOP42166 694 aaKnown RBP16.44■□□□□ 0.22
SENP3-204ENST00000580997 PRELPP51888 382 aa16.44■□□□□ 0.22
SENP3-204ENST00000580997 ST5P78524 1137 aa16.44■□□□□ 0.22
SENP3-204ENST00000580997 ZC3H4Q9UPT8 1303 aaKnown RBP16.44■□□□□ 0.22
SENP3-204ENST00000580997 ERVV-1B6SEH8 477 aa16.43■□□□□ 0.22
SENP3-204ENST00000580997 HSPA6P17066 643 aa16.43■□□□□ 0.22
SENP3-204ENST00000580997 LMNB1P20700 586 aa16.43■□□□□ 0.22
SENP3-204ENST00000580997 RASSF7Q02833 373 aa16.43■□□□□ 0.22
SENP3-204ENST00000580997 HLFQ16534 295 aa16.43■□□□□ 0.22
SENP3-204ENST00000580997 STYK1Q6J9G0 422 aa16.43■□□□□ 0.22
SENP3-204ENST00000580997 TPTE2Q6XPS3 522 aa16.43■□□□□ 0.22
SENP3-204ENST00000580997 NBPF5PQ86XG9 351 aaPredicted RBP16.43■□□□□ 0.22
SENP3-204ENST00000580997 ZNF622Q969S3 477 aaKnown RBP eCLIP16.43■□□□□ 0.22
SENP3-204ENST00000580997 NMRK2Q9NPI5 230 aa16.43■□□□□ 0.22
SENP3-204ENST00000580997 SBF1O95248 1867 aa16.42■□□□□ 0.22
SENP3-204ENST00000580997 NFKBIEO00221 500 aa16.42■□□□□ 0.22
SENP3-204ENST00000580997 CNKSR1Q969H4 720 aa16.42■□□□□ 0.22
SENP3-204ENST00000580997 NIP7Q9Y221 180 aaKnown RBP eCLIP16.42■□□□□ 0.22
SENP3-204ENST00000580997 KDM2BQ8NHM5 1336 aa16.42■□□□□ 0.22
SENP3-204ENST00000580997 LMOD3Q0VAK6 560 aa16.41■□□□□ 0.22
SENP3-204ENST00000580997 MASTLQ96GX5 879 aa16.41■□□□□ 0.22
SENP3-204ENST00000580997 TSPYL4Q9UJ04 414 aa16.41■□□□□ 0.22
SENP3-204ENST00000580997 ERBB4Q15303 1308 aa16.41■□□□□ 0.22
SENP3-204ENST00000580997 LAMB4A4D0S4 1761 aa16.41■□□□□ 0.22
SENP3-204ENST00000580997 NPHP1O15259 732 aa16.4■□□□□ 0.22
SENP3-204ENST00000580997 C21orf2O43822 256 aa16.4■□□□□ 0.22
SENP3-204ENST00000580997 LRP10Q7Z4F1 713 aa16.39■□□□□ 0.21
SENP3-204ENST00000580997 C7orf43Q8WVR3 580 aa16.39■□□□□ 0.21
SENP3-204ENST00000580997 RUNDC1Q96C34 613 aa16.39■□□□□ 0.21
SENP3-204ENST00000580997 PRKRIP1Q9H875 184 aaPredicted RBP16.39■□□□□ 0.21
SENP3-204ENST00000580997 RRP7AQ9Y3A4 280 aaKnown RBP16.39■□□□□ 0.21
SENP3-204ENST00000580997 MAP3K15Q6ZN16 1313 aa16.39■□□□□ 0.21
SENP3-204ENST00000580997 LTBP3Q9NS15 1303 aa16.39■□□□□ 0.21
SENP3-204ENST00000580997 COL11A2P13942 1736 aaPredicted RBP16.39■□□□□ 0.21
SENP3-204ENST00000580997 MYL6BP14649 208 aa16.38■□□□□ 0.21
SENP3-204ENST00000580997 NPR1P16066 1061 aa16.38■□□□□ 0.21
SENP3-204ENST00000580997 PDIA6Q15084 440 aa16.38■□□□□ 0.21
SENP3-204ENST00000580997 PRPF40BQ6NWY9 871 aaKnown RBP16.38■□□□□ 0.21
SENP3-204ENST00000580997 TTLL7Q6ZT98 887 aa16.38■□□□□ 0.21
SENP3-204ENST00000580997 NGEFQ8N5V2 710 aa16.38■□□□□ 0.21
SENP3-204ENST00000580997 ADAMTS8Q9UP79 889 aa16.38■□□□□ 0.21
SENP3-204ENST00000580997 GLTPD2A6NH11 291 aa16.37■□□□□ 0.21
SENP3-204ENST00000580997 CHL1O00533 1208 aa16.37■□□□□ 0.21
SENP3-204ENST00000580997 SOGA3Q5TF21 947 aa16.37■□□□□ 0.21
SENP3-204ENST00000580997 KIF6Q6ZMV9 814 aa16.37■□□□□ 0.21
SENP3-204ENST00000580997 CCDC146Q8IYE0 955 aa16.37■□□□□ 0.21
SENP3-204ENST00000580997 RBM46Q8TBY0 533 aaKnown RBP16.37■□□□□ 0.21
SENP3-204ENST00000580997 RRAGCQ9HB90 399 aa16.37■□□□□ 0.21
SENP3-204ENST00000580997 TRIM35Q9UPQ4 493 aa16.37■□□□□ 0.21
SENP3-204ENST00000580997 WDR43Q15061 677 aaKnown RBP eCLIP16.36■□□□□ 0.21
SENP3-204ENST00000580997 NYXQ9GZU5 481 aa16.36■□□□□ 0.21
SENP3-204ENST00000580997 CRY2Q49AN0 593 aa16.35■□□□□ 0.21
SENP3-204ENST00000580997 GIGYF2Q6Y7W6 1299 aaKnown RBP16.35■□□□□ 0.21
SENP3-204ENST00000580997 ZNF34Q8IZ26 560 aa16.35■□□□□ 0.21
SENP3-204ENST00000580997 TAOK3Q9H2K8 898 aa16.35■□□□□ 0.21
SENP3-204ENST00000580997 SLX4Q8IY92 1834 aa16.34■□□□□ 0.21
SENP3-204ENST00000580997 FER1L6Q2WGJ9 1857 aa16.34■□□□□ 0.21
SENP3-204ENST00000580997 FAM177BA6PVY3 158 aa16.34■□□□□ 0.21
SENP3-204ENST00000580997 NEUROD2Q15784 382 aa16.34■□□□□ 0.21
SENP3-204ENST00000580997 C16orf71Q8IYS4 520 aaPredicted RBP16.34■□□□□ 0.21
SENP3-204ENST00000580997 ZBTB3Q9H5J0 574 aa16.34■□□□□ 0.21
SENP3-204ENST00000580997 UBN2Q6ZU65 1347 aa16.34■□□□□ 0.21
SENP3-204ENST00000580997 IBTKQ9P2D0 1353 aaPredicted RBP16.34■□□□□ 0.21
SENP3-204ENST00000580997 EIF2S2P20042 333 aaKnown RBP16.33■□□□□ 0.2
SENP3-204ENST00000580997 GTF2E1P29083 439 aaPredicted RBP16.33■□□□□ 0.2
SENP3-204ENST00000580997 ALDH1B1P30837 517 aa16.33■□□□□ 0.2
SENP3-204ENST00000580997 APLP1P51693 650 aa16.33■□□□□ 0.2
SENP3-204ENST00000580997 FSTL1Q12841 308 aa16.33■□□□□ 0.2
SENP3-204ENST00000580997 ERFEQ4G0M1 354 aa16.33■□□□□ 0.2
SENP3-204ENST00000580997 NPM3O75607 178 aaKnown RBP16.32■□□□□ 0.2
SENP3-204ENST00000580997 VEGFAP15692 232 aaPredicted RBP16.32■□□□□ 0.2
SENP3-204ENST00000580997 PROSER3Q2NL68 480 aa16.32■□□□□ 0.2
SENP3-204ENST00000580997 RIC1Q4ADV7 1423 aa16.32■□□□□ 0.2
SENP3-204ENST00000580997 SUSD4Q5VX71 490 aa16.32■□□□□ 0.2
SENP3-204ENST00000580997 DPY19L2Q6NUT2 758 aa16.32■□□□□ 0.2
SENP3-204ENST00000580997 NUTM1Q86Y26 1132 aa16.32■□□□□ 0.2
SENP3-204ENST00000580997 TNRC6CQ9HCJ0 1690 aaKnown RBP16.32■□□□□ 0.2
SENP3-204ENST00000580997 ARFGEF2Q9Y6D5 1785 aa16.32■□□□□ 0.2
SENP3-204ENST00000580997 NUP98P52948 1817 aa16.31■□□□□ 0.2
SENP3-204ENST00000580997 ABCC12Q96J65 1359 aa16.31■□□□□ 0.2
SENP3-204ENST00000580997 POTECB2RU33 542 aa16.31■□□□□ 0.2
SENP3-204ENST00000580997 GPTP24298 496 aa16.31■□□□□ 0.2
SENP3-204ENST00000580997 HOXA10P31260 410 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms