RNA–Protein interactions for RNA: ENST00000580573.1

KPNB1-210, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-210ENST00000580573 ZBTB40Q9NUA8 1239 aa10.13□□□□□ -0.79
KPNB1-210ENST00000580573 CHPF2Q9P2E5 772 aa10.13□□□□□ -0.79
KPNB1-210ENST00000580573 MYH14Q7Z406 1995 aaKnown RBP10.13□□□□□ -0.79
KPNB1-210ENST00000580573 ADCY9O60503 1353 aa10.13□□□□□ -0.79
KPNB1-210ENST00000580573 ZBTB7BO15156 539 aaPredicted RBP10.12□□□□□ -0.79
KPNB1-210ENST00000580573 MEX3CQ5U5Q3 659 aaKnown RBP10.12□□□□□ -0.79
KPNB1-210ENST00000580573 FBXO41Q8TF61 875 aa10.12□□□□□ -0.79
KPNB1-210ENST00000580573 BCL11BQ9C0K0 894 aaPredicted RBP10.12□□□□□ -0.79
KPNB1-210ENST00000580573 STK24Q9Y6E0 443 aa10.12□□□□□ -0.79
KPNB1-210ENST00000580573 B4GALNT3Q6L9W6 998 aa10.11□□□□□ -0.79
KPNB1-210ENST00000580573 CCDC136Q96JN2 1154 aa10.11□□□□□ -0.79
KPNB1-210ENST00000580573 CHMP4BQ9H444 224 aaKnown RBP10.11□□□□□ -0.79
KPNB1-210ENST00000580573 HYPKQ9NX55 129 aa10.11□□□□□ -0.79
KPNB1-210ENST00000580573 CCDC9Q9Y3X0 531 aaKnown RBP10.11□□□□□ -0.79
KPNB1-210ENST00000580573 RGPD3A6NKT7 1758 aaPredicted RBP10.11□□□□□ -0.79
KPNB1-210ENST00000580573 BCORQ6W2J9 1755 aa10.11□□□□□ -0.79
KPNB1-210ENST00000580573 RGPD4Q7Z3J3 1758 aa10.11□□□□□ -0.79
KPNB1-210ENST00000580573 NUP98P52948 1817 aa10.1□□□□□ -0.79
KPNB1-210ENST00000580573 CCT4P50991 539 aaKnown RBP10.1□□□□□ -0.79
KPNB1-210ENST00000580573 PROSER3Q2NL68 480 aa10.1□□□□□ -0.79
KPNB1-210ENST00000580573 PHAXQ9H814 394 aaKnown RBP10.1□□□□□ -0.79
KPNB1-210ENST00000580573 ASAP1Q9ULH1 1129 aa10.1□□□□□ -0.79
KPNB1-210ENST00000580573 USP16Q9Y5T5 823 aa10.1□□□□□ -0.79
KPNB1-210ENST00000580573 EP400Q96L91 3159 aa10.09□□□□□ -0.79
KPNB1-210ENST00000580573 EIF2S2P20042 333 aaKnown RBP10.09□□□□□ -0.79
KPNB1-210ENST00000580573 PRIM1P49642 420 aaKnown RBP10.09□□□□□ -0.79
KPNB1-210ENST00000580573 FKBP5Q13451 457 aaPredicted RBP10.09□□□□□ -0.79
KPNB1-210ENST00000580573 ITPRIPQ8IWB1 547 aa10.09□□□□□ -0.79
KPNB1-210ENST00000580573 SLC4A9Q96Q91 983 aa10.09□□□□□ -0.79
KPNB1-210ENST00000580573 TEX13AQ9BXU3 409 aaPredicted RBP10.09□□□□□ -0.79
KPNB1-210ENST00000580573 PCDHB15Q9Y5E8 787 aa10.09□□□□□ -0.79
KPNB1-210ENST00000580573 TNS1Q9HBL0 1735 aaKnown RBP10.08□□□□□ -0.8
KPNB1-210ENST00000580573 NBPF26B4DH59 902 aa10.08□□□□□ -0.8
KPNB1-210ENST00000580573 PDAP1Q13442 181 aaKnown RBP10.08□□□□□ -0.8
KPNB1-210ENST00000580573 HDAC1Q13547 482 aaPredicted RBP10.08□□□□□ -0.8
KPNB1-210ENST00000580573 NBPF14Q5TI25 921 aa10.08□□□□□ -0.8
KPNB1-210ENST00000580573 ZNF772Q68DY9 489 aaPredicted RBP10.08□□□□□ -0.8
KPNB1-210ENST00000580573 NBPF10Q6P3W6 841 aaKnown RBP10.08□□□□□ -0.8
KPNB1-210ENST00000580573 CENPQQ7L2Z9 268 aaPredicted RBP10.08□□□□□ -0.8
KPNB1-210ENST00000580573 NBPF15Q8N660 670 aa10.08□□□□□ -0.8
KPNB1-210ENST00000580573 ZNF579Q8NAF0 562 aaKnown RBP10.08□□□□□ -0.8
KPNB1-210ENST00000580573 NECTIN2Q92692 538 aa10.08□□□□□ -0.8
KPNB1-210ENST00000580573 QTRT2Q9H974 415 aaKnown RBP10.08□□□□□ -0.8
KPNB1-210ENST00000580573 RYDENQ9NUL5 291 aaKnown RBP10.08□□□□□ -0.8
KPNB1-210ENST00000580573 SCN7AQ01118 1682 aa10.07□□□□□ -0.8
KPNB1-210ENST00000580573 PALLDQ8WX93 1383 aa10.07□□□□□ -0.8
KPNB1-210ENST00000580573 F6X3S4 739 aa10.07□□□□□ -0.8
KPNB1-210ENST00000580573 BEND3Q5T5X7 828 aa10.07□□□□□ -0.8
KPNB1-210ENST00000580573 KSR2Q6VAB6 950 aa10.07□□□□□ -0.8
KPNB1-210ENST00000580573 DNAAF4Q8WXU2 420 aa10.07□□□□□ -0.8
KPNB1-210ENST00000580573 PI4KAP2A4QPH2 592 aa10.06□□□□□ -0.8
KPNB1-210ENST00000580573 PTCD1O75127 700 aaKnown RBP10.06□□□□□ -0.8
KPNB1-210ENST00000580573 ANXA1P04083 346 aa10.06□□□□□ -0.8
KPNB1-210ENST00000580573 SEPT12Q8IYM1 358 aa10.06□□□□□ -0.8
KPNB1-210ENST00000580573 PI4KAP1Q8N8J0 262 aa10.06□□□□□ -0.8
KPNB1-210ENST00000580573 SMARCC1Q92922 1105 aaPredicted RBP10.06□□□□□ -0.8
KPNB1-210ENST00000580573 UTYO14607 1347 aa10.06□□□□□ -0.8
KPNB1-210ENST00000580573 C4AP0C0L4 1744 aa10.05□□□□□ -0.8
KPNB1-210ENST00000580573 C4BP0C0L5 1744 aa10.05□□□□□ -0.8
KPNB1-210ENST00000580573 COL15A1P39059 1388 aa10.05□□□□□ -0.8
KPNB1-210ENST00000580573 UBR3Q6ZT12 1888 aa10.05□□□□□ -0.8
KPNB1-210ENST00000580573 GTPBP6O43824 516 aaPredicted RBP10.05□□□□□ -0.8
KPNB1-210ENST00000580573 ALDH1L1O75891 902 aa10.05□□□□□ -0.8
KPNB1-210ENST00000580573 DDX58O95786 925 aaKnown RBP10.05□□□□□ -0.8
KPNB1-210ENST00000580573 IGHDP01880 384 aa10.05□□□□□ -0.8
KPNB1-210ENST00000580573 CYP19A1P11511 503 aaPredicted RBP10.05□□□□□ -0.8
KPNB1-210ENST00000580573 RBM6P78332 1123 aaKnown RBP10.05□□□□□ -0.8
KPNB1-210ENST00000580573 DNAJC10Q8IXB1 793 aa10.05□□□□□ -0.8
KPNB1-210ENST00000580573 TSHZ2Q9NRE2 1034 aa10.05□□□□□ -0.8
KPNB1-210ENST00000580573 PCDHB8Q9UN66 801 aa10.05□□□□□ -0.8
KPNB1-210ENST00000580573 PCDHB13Q9Y5F0 798 aa10.05□□□□□ -0.8
KPNB1-210ENST00000580573 LAMB2P55268 1798 aa10.05□□□□□ -0.8
KPNB1-210ENST00000580573 MYH3P11055 1940 aa10.04□□□□□ -0.8
KPNB1-210ENST00000580573 LOC102724428A0A0B4J2F2 783 aa10.04□□□□□ -0.8
KPNB1-210ENST00000580573 KCNQ2O43526 872 aa10.04□□□□□ -0.8
KPNB1-210ENST00000580573 STARD3NLO95772 234 aa10.04□□□□□ -0.8
KPNB1-210ENST00000580573 CD44P16070 742 aaKnown RBP10.04□□□□□ -0.8
KPNB1-210ENST00000580573 SIK1P57059 783 aa10.04□□□□□ -0.8
KPNB1-210ENST00000580573 COPS6Q7L5N1 327 aa10.04□□□□□ -0.8
KPNB1-210ENST00000580573 SIRT2Q8IXJ6 389 aa10.04□□□□□ -0.8
KPNB1-210ENST00000580573 SMC5Q8IY18 1101 aa10.04□□□□□ -0.8
KPNB1-210ENST00000580573 LINS1Q8NG48 757 aa10.04□□□□□ -0.8
KPNB1-210ENST00000580573 PLBD2Q8NHP8 589 aa10.04□□□□□ -0.8
KPNB1-210ENST00000580573 XAGE3Q8WTP9 111 aa10.04□□□□□ -0.8
KPNB1-210ENST00000580573 MEIS3Q99687 375 aa10.04□□□□□ -0.8
KPNB1-210ENST00000580573 USP44Q9H0E7 712 aa10.04□□□□□ -0.8
KPNB1-210ENST00000580573 A1BGP04217 495 aa10.03□□□□□ -0.8
KPNB1-210ENST00000580573 GNAI3P08754 354 aa10.03□□□□□ -0.8
KPNB1-210ENST00000580573 COL24A1Q17RW2 1714 aa10.03□□□□□ -0.8
KPNB1-210ENST00000580573 RPAP2Q8IXW5 612 aaPredicted RBP10.03□□□□□ -0.8
KPNB1-210ENST00000580573 ANKRD44Q8N8A2 993 aa10.03□□□□□ -0.8
KPNB1-210ENST00000580573 SYTL4Q96C24 671 aaPredicted RBP10.03□□□□□ -0.8
KPNB1-210ENST00000580573 ACSBG1Q96GR2 724 aa10.03□□□□□ -0.8
KPNB1-210ENST00000580573 METTL22Q9BUU2 404 aaPredicted RBP10.03□□□□□ -0.8
KPNB1-210ENST00000580573 SRCIN1Q9C0H9 1055 aa10.03□□□□□ -0.8
KPNB1-210ENST00000580573 RWDD1Q9H446 243 aaPredicted RBP10.03□□□□□ -0.8
KPNB1-210ENST00000580573 RGS17Q9UGC6 210 aaPredicted RBP10.03□□□□□ -0.8
KPNB1-210ENST00000580573 MAP3K2Q9Y2U5 619 aa10.03□□□□□ -0.8
KPNB1-210ENST00000580573 CASZ1Q86V15 1759 aa10.03□□□□□ -0.8
KPNB1-210ENST00000580573 TUBGCP6Q96RT7 1819 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms