RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 SPAG9O60271 1321 aaKnown RBP10.53□□□□□ -0.72
PPP4R1-216ENST00000580283 USP17L5A8MUK1 530 aa10.52□□□□□ -0.73
PPP4R1-216ENST00000580283 GPC1P35052 558 aa10.52□□□□□ -0.73
PPP4R1-216ENST00000580283 POTEAQ6S8J7 498 aa10.52□□□□□ -0.73
PPP4R1-216ENST00000580283 LYSMD3Q7Z3D4 306 aa10.52□□□□□ -0.73
PPP4R1-216ENST00000580283 A2MP01023 1474 aa10.52□□□□□ -0.73
PPP4R1-216ENST00000580283 WFS1O76024 890 aa10.51□□□□□ -0.73
PPP4R1-216ENST00000580283 NCOA4Q13772 614 aa10.51□□□□□ -0.73
PPP4R1-216ENST00000580283 PRICKLE2Q7Z3G6 844 aa10.51□□□□□ -0.73
PPP4R1-216ENST00000580283 NPAS3Q8IXF0 933 aa10.51□□□□□ -0.73
PPP4R1-216ENST00000580283 DEPDC4Q8N2C3 294 aa10.51□□□□□ -0.73
PPP4R1-216ENST00000580283 CNKSR1Q969H4 720 aa10.51□□□□□ -0.73
PPP4R1-216ENST00000580283 UCN2Q96RP3 112 aa10.51□□□□□ -0.73
PPP4R1-216ENST00000580283 ZNF777Q9ULD5 760 aaPredicted RBP10.51□□□□□ -0.73
PPP4R1-216ENST00000580283 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.51□□□□□ -0.731e-18■■■■□ 20.3
PPP4R1-216ENST00000580283 ADGBQ8N7X0 1667 aa10.5□□□□□ -0.73
PPP4R1-216ENST00000580283 LRRC7Q96NW7 1537 aa10.5□□□□□ -0.73
PPP4R1-216ENST00000580283 GPATCH8Q9UKJ3 1502 aaKnown RBP10.5□□□□□ -0.73
PPP4R1-216ENST00000580283 ATP9BO43861 1147 aa10.5□□□□□ -0.73
PPP4R1-216ENST00000580283 PTSQ03393 145 aa10.5□□□□□ -0.73
PPP4R1-216ENST00000580283 TBC1D9Q6ZT07 1266 aa10.5□□□□□ -0.73
PPP4R1-216ENST00000580283 ESYT1Q9BSJ8 1104 aa10.5□□□□□ -0.73
PPP4R1-216ENST00000580283 ZMYND15Q9H091 742 aa10.5□□□□□ -0.73
PPP4R1-216ENST00000580283 MED14O60244 1454 aa10.49□□□□□ -0.73
PPP4R1-216ENST00000580283 DEPDC5O75140 1603 aa10.49□□□□□ -0.73
PPP4R1-216ENST00000580283 GTF2E1P29083 439 aaPredicted RBP10.49□□□□□ -0.73
PPP4R1-216ENST00000580283 VEGFBP49765 207 aa10.49□□□□□ -0.73
PPP4R1-216ENST00000580283 TREML4Q6UXN2 200 aa10.49□□□□□ -0.73
PPP4R1-216ENST00000580283 IQGAP1P46940 1657 aa10.48□□□□□ -0.73
PPP4R1-216ENST00000580283 SETD1AO15047 1707 aaKnown RBP10.48□□□□□ -0.73
PPP4R1-216ENST00000580283 USP17L3A6NCW0 530 aa10.48□□□□□ -0.73
PPP4R1-216ENST00000580283 USP17L4A6NCW7 530 aa10.48□□□□□ -0.73
PPP4R1-216ENST00000580283 IL2RAP01589 272 aa10.48□□□□□ -0.73
PPP4R1-216ENST00000580283 PSME1Q06323 249 aa10.48□□□□□ -0.73
PPP4R1-216ENST00000580283 NFX1Q12986 1120 aaKnown RBP10.48□□□□□ -0.73
PPP4R1-216ENST00000580283 USP17L2Q6R6M4 530 aa10.48□□□□□ -0.73
PPP4R1-216ENST00000580283 USP17L1Q7RTZ2 530 aa10.48□□□□□ -0.73
PPP4R1-216ENST00000580283 XAGE2Q96GT9 111 aa10.48□□□□□ -0.73
PPP4R1-216ENST00000580283 GDF10P55107 478 aa10.47□□□□□ -0.73
PPP4R1-216ENST00000580283 GTF2IP78347 998 aa10.47□□□□□ -0.73
PPP4R1-216ENST00000580283 ANKLE2Q86XL3 938 aa10.47□□□□□ -0.73
PPP4R1-216ENST00000580283 TRIM50Q86XT4 487 aa10.47□□□□□ -0.73
PPP4R1-216ENST00000580283 PLEKHM2Q8IWE5 1019 aa10.47□□□□□ -0.73
PPP4R1-216ENST00000580283 ETNK1Q9HBU6 452 aa10.47□□□□□ -0.73
PPP4R1-216ENST00000580283 TNRQ92752 1358 aa10.47□□□□□ -0.73
PPP4R1-216ENST00000580283 ZC3H13Q5T200 1668 aaKnown RBP10.47□□□□□ -0.73
PPP4R1-216ENST00000580283 CFAP65Q6ZU64 1925 aaKnown RBP10.46□□□□□ -0.73
PPP4R1-216ENST00000580283 H3BM21 787 aa10.46□□□□□ -0.73
PPP4R1-216ENST00000580283 PPFIA3O75145 1194 aa10.46□□□□□ -0.73
PPP4R1-216ENST00000580283 RHOQP17081 205 aa10.46□□□□□ -0.73
PPP4R1-216ENST00000580283 CENPCQ03188 943 aa10.46□□□□□ -0.73
PPP4R1-216ENST00000580283 ZSCAN10Q96SZ4 725 aaPredicted RBP10.46□□□□□ -0.73
PPP4R1-216ENST00000580283 GRIP2Q9C0E4 1043 aa10.46□□□□□ -0.73
PPP4R1-216ENST00000580283 TFIP11Q9UBB9 837 aaKnown RBP10.46□□□□□ -0.73
PPP4R1-216ENST00000580283 NPHP4O75161 1426 aaPredicted RBP10.46□□□□□ -0.74
PPP4R1-216ENST00000580283 KIAA1107Q9UPP5 1409 aa10.46□□□□□ -0.74
PPP4R1-216ENST00000580283 RNF17Q9BXT8 1623 aaKnown RBP10.46□□□□□ -0.74
PPP4R1-216ENST00000580283 SRCAPQ6ZRS2 3230 aa10.45□□□□□ -0.74
PPP4R1-216ENST00000580283 CASKIN1Q8WXD9 1431 aa10.45□□□□□ -0.74
PPP4R1-216ENST00000580283 STAU1O95793 577 aaKnown RBP10.45□□□□□ -0.74
PPP4R1-216ENST00000580283 CCDC155Q8N6L0 562 aa10.45□□□□□ -0.74
PPP4R1-216ENST00000580283 IRF7Q92985 503 aa10.45□□□□□ -0.74
PPP4R1-216ENST00000580283 PZPP20742 1482 aa10.44□□□□□ -0.74
PPP4R1-216ENST00000580283 ZNF644Q9H582 1327 aaPredicted RBP10.44□□□□□ -0.74
PPP4R1-216ENST00000580283 SLC35F4A4IF30 521 aa10.44□□□□□ -0.74
PPP4R1-216ENST00000580283 INHAP05111 366 aa10.44□□□□□ -0.74
PPP4R1-216ENST00000580283 ATP1A2P50993 1020 aa10.44□□□□□ -0.74
PPP4R1-216ENST00000580283 TLR1Q15399 786 aa10.44□□□□□ -0.74
PPP4R1-216ENST00000580283 TMEM214Q6NUQ4 689 aaKnown RBP10.44□□□□□ -0.74
PPP4R1-216ENST00000580283 PCDHGA11Q9Y5H2 935 aa10.44□□□□□ -0.74
PPP4R1-216ENST00000580283 UGGT1Q9NYU2 1555 aa10.43□□□□□ -0.74
PPP4R1-216ENST00000580283 CCDC18Q5T9S5 1454 aa10.43□□□□□ -0.74
PPP4R1-216ENST00000580283 MIA2Q96PC5 1412 aa10.43□□□□□ -0.74
PPP4R1-216ENST00000580283 PALM3A6NDB9 673 aaPredicted RBP10.43□□□□□ -0.74
PPP4R1-216ENST00000580283 SCNN1DP51172 638 aa10.43□□□□□ -0.74
PPP4R1-216ENST00000580283 POU4F2Q12837 409 aa10.43□□□□□ -0.74
PPP4R1-216ENST00000580283 GNASQ5JWF2 1037 aa10.43□□□□□ -0.74
PPP4R1-216ENST00000580283 THEMISQ8N1K5 641 aaPredicted RBP10.43□□□□□ -0.74
PPP4R1-216ENST00000580283 PPP1R12CQ9BZL4 782 aa10.43□□□□□ -0.74
PPP4R1-216ENST00000580283 MBD5Q9P267 1494 aa10.42□□□□□ -0.74
PPP4R1-216ENST00000580283 DHX29Q7Z478 1369 aaKnown RBP10.42□□□□□ -0.74
PPP4R1-216ENST00000580283 TAS1R3Q7RTX0 852 aa10.42□□□□□ -0.74
PPP4R1-216ENST00000580283 C14orf37Q86TY3 774 aa10.42□□□□□ -0.74
PPP4R1-216ENST00000580283 MKRN1Q9UHC7 482 aaKnown RBP10.42□□□□□ -0.74
PPP4R1-216ENST00000580283 SERTAD1Q9UHV2 236 aa10.42□□□□□ -0.74
PPP4R1-216ENST00000580283 HRH3Q9Y5N1 445 aa10.42□□□□□ -0.74
PPP4R1-216ENST00000580283 MAFBQ9Y5Q3 323 aaPredicted RBP10.42□□□□□ -0.74
PPP4R1-216ENST00000580283 SYNMO15061 1565 aa10.42□□□□□ -0.74
PPP4R1-216ENST00000580283 SPATA31C2B4DYI2 1134 aa10.41□□□□□ -0.74
PPP4R1-216ENST00000580283 NBPF10Q6P3W6 841 aaKnown RBP10.41□□□□□ -0.74
PPP4R1-216ENST00000580283 NBPF15Q8N660 670 aa10.41□□□□□ -0.74
PPP4R1-216ENST00000580283 FHDC1Q9C0D6 1143 aaPredicted RBP10.41□□□□□ -0.74
PPP4R1-216ENST00000580283 WASLO00401 505 aaPredicted RBP10.4□□□□□ -0.74
PPP4R1-216ENST00000580283 BACH1O14867 736 aa10.4□□□□□ -0.74
PPP4R1-216ENST00000580283 KIF3BO15066 747 aa10.4□□□□□ -0.74
PPP4R1-216ENST00000580283 CFDP1Q9UEE9 299 aaPredicted RBP10.4□□□□□ -0.74
PPP4R1-216ENST00000580283 RBM19Q9Y4C8 960 aaKnown RBP10.4□□□□□ -0.74
PPP4R1-216ENST00000580283 NLRP1Q9C000 1473 aa10.4□□□□□ -0.74
PPP4R1-216ENST00000580283 UBR1Q8IWV7 1749 aa10.39□□□□□ -0.75
PPP4R1-216ENST00000580283 PLEKHH2Q8IVE3 1493 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms