RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 CLEC4GQ6UXB4 293 aa24.27■■□□□ 1.48
PPP4R1-215ENST00000580182 CCDC24Q8N4L8 307 aa24.27■■□□□ 1.48
PPP4R1-215ENST00000580182 SETDB2Q96T68 719 aa24.27■■□□□ 1.48
PPP4R1-215ENST00000580182 CARMIL3Q8ND23 1372 aa24.27■■□□□ 1.48
PPP4R1-215ENST00000580182 ELL2O00472 640 aaPredicted RBP24.26■■□□□ 1.47
PPP4R1-215ENST00000580182 TSR2Q969E8 191 aaKnown RBP24.26■■□□□ 1.47
PPP4R1-215ENST00000580182 ZNF652Q9Y2D9 606 aa24.26■■□□□ 1.47
PPP4R1-215ENST00000580182 KCNA3P22001 575 aa24.25■■□□□ 1.47
PPP4R1-215ENST00000580182 CHRNA5P30532 468 aa24.25■■□□□ 1.47
PPP4R1-215ENST00000580182 NCBP3Q53F19 620 aaKnown RBP24.25■■□□□ 1.47
PPP4R1-215ENST00000580182 HDGFL1Q5TGJ6 251 aa24.25■■□□□ 1.47
PPP4R1-215ENST00000580182 ZBTB3Q9H5J0 574 aa24.25■■□□□ 1.47
PPP4R1-215ENST00000580182 MAP3K15Q6ZN16 1313 aa24.25■■□□□ 1.47
PPP4R1-215ENST00000580182 HOXB7P09629 217 aa24.24■■□□□ 1.47
PPP4R1-215ENST00000580182 PRR5LQ6MZQ0 368 aa24.24■■□□□ 1.47
PPP4R1-215ENST00000580182 KIF6Q6ZMV9 814 aa24.24■■□□□ 1.47
PPP4R1-215ENST00000580182 C8orf58Q8NAV2 365 aa24.24■■□□□ 1.47
PPP4R1-215ENST00000580182 CHPF2Q9P2E5 772 aa24.24■■□□□ 1.47
PPP4R1-215ENST00000580182 NIP7Q9Y221 180 aaKnown RBP eCLIP24.23■■□□□ 1.47
PPP4R1-215ENST00000580182 ERVV-1B6SEH8 477 aa24.22■■□□□ 1.47
PPP4R1-215ENST00000580182 DDX21Q9NR30 783 aaKnown RBP eCLIP24.22■■□□□ 1.47
PPP4R1-215ENST00000580182 RGL2O15211 777 aa24.21■■□□□ 1.47
PPP4R1-215ENST00000580182 AIMP1Q12904 312 aaKnown RBP24.21■■□□□ 1.47
PPP4R1-215ENST00000580182 DIEXFQ68CQ4 756 aaKnown RBP24.21■■□□□ 1.47
PPP4R1-215ENST00000580182 COPS6Q7L5N1 327 aa24.21■■□□□ 1.47
PPP4R1-215ENST00000580182 TSPYL6Q8N831 410 aa24.21■■□□□ 1.47
PPP4R1-215ENST00000580182 XAGE3Q8WTP9 111 aa24.21■■□□□ 1.47
PPP4R1-215ENST00000580182 NUP98P52948 1817 aa24.21■■□□□ 1.47
PPP4R1-215ENST00000580182 FAM177BA6PVY3 158 aa24.2■■□□□ 1.46
PPP4R1-215ENST00000580182 CCER2I3L3R5 266 aa24.2■■□□□ 1.46
PPP4R1-215ENST00000580182 BCS1LQ9Y276 419 aa24.2■■□□□ 1.46
PPP4R1-215ENST00000580182 IL16Q14005 1332 aa24.19■■□□□ 1.46
PPP4R1-215ENST00000580182 GRIN3BO60391 1043 aa24.19■■□□□ 1.46
PPP4R1-215ENST00000580182 YY1P25490 414 aa24.19■■□□□ 1.46
PPP4R1-215ENST00000580182 NBPF5PQ86XG9 351 aaPredicted RBP24.19■■□□□ 1.46
PPP4R1-215ENST00000580182 WDR63Q8IWG1 891 aa24.19■■□□□ 1.46
PPP4R1-215ENST00000580182 CNBD1Q8NA66 436 aa24.19■■□□□ 1.46
PPP4R1-215ENST00000580182 BRCA1P38398 1863 aaKnown RBP24.19■■□□□ 1.46
PPP4R1-215ENST00000580182 ANKRD31Q8N7Z5 1873 aa24.19■■□□□ 1.46
PPP4R1-215ENST00000580182 SPINK5Q9NQ38 1064 aaPredicted RBP24.18■■□□□ 1.46
PPP4R1-215ENST00000580182 PIM2Q9P1W9 311 aa24.18■■□□□ 1.46
PPP4R1-215ENST00000580182 DBF4Q9UBU7 674 aaPredicted RBP24.18■■□□□ 1.46
PPP4R1-215ENST00000580182 NPHP1O15259 732 aa24.17■■□□□ 1.46
PPP4R1-215ENST00000580182 GPTP24298 496 aa24.17■■□□□ 1.46
PPP4R1-215ENST00000580182 GIGYF2Q6Y7W6 1299 aaKnown RBP24.17■■□□□ 1.46
PPP4R1-215ENST00000580182 C2CD5Q86YS7 1000 aa24.17■■□□□ 1.46
PPP4R1-215ENST00000580182 BRIP1Q9BX63 1249 aa24.16■■□□□ 1.46
PPP4R1-215ENST00000580182 ATP10DQ9P241 1426 aa24.16■■□□□ 1.46
PPP4R1-215ENST00000580182 UBN2Q6ZU65 1347 aa24.15■■□□□ 1.46
PPP4R1-215ENST00000580182 FANCIQ9NVI1 1328 aa24.15■■□□□ 1.46
PPP4R1-215ENST00000580182 ST5P78524 1137 aa24.15■■□□□ 1.46
PPP4R1-215ENST00000580182 ZNF34Q8IZ26 560 aa24.15■■□□□ 1.46
PPP4R1-215ENST00000580182 MIER1Q8N108 512 aa24.15■■□□□ 1.46
PPP4R1-215ENST00000580182 CHD4Q14839 1912 aa24.15■■□□□ 1.46
PPP4R1-215ENST00000580182 H0YIN7 160 aa24.13■■□□□ 1.45
PPP4R1-215ENST00000580182 DALRD3Q5D0E6 543 aaKnown RBP24.13■■□□□ 1.45
PPP4R1-215ENST00000580182 TPTE2Q6XPS3 522 aa24.13■■□□□ 1.45
PPP4R1-215ENST00000580182 PDE6BP35913 854 aa24.12■■□□□ 1.45
PPP4R1-215ENST00000580182 SUSD4Q5VX71 490 aa24.12■■□□□ 1.45
PPP4R1-215ENST00000580182 NUTM1Q86Y26 1132 aa24.12■■□□□ 1.45
PPP4R1-215ENST00000580182 PHAXQ9H814 394 aaKnown RBP24.12■■□□□ 1.45
PPP4R1-215ENST00000580182 HYPKQ9NX55 129 aa24.12■■□□□ 1.45
PPP4R1-215ENST00000580182 DLEC1Q9Y238 1755 aa24.11■■□□□ 1.45
PPP4R1-215ENST00000580182 COL11A2P13942 1736 aaPredicted RBP24.11■■□□□ 1.45
PPP4R1-215ENST00000580182 TCERG1O14776 1098 aaKnown RBP24.11■■□□□ 1.45
PPP4R1-215ENST00000580182 TWISTNBQ3B726 338 aaPredicted RBP24.11■■□□□ 1.45
PPP4R1-215ENST00000580182 ZNF521Q96K83 1311 aa24.1■■□□□ 1.45
PPP4R1-215ENST00000580182 ABCC12Q96J65 1359 aa24.09■■□□□ 1.45
PPP4R1-215ENST00000580182 GTF2E1P29083 439 aaPredicted RBP24.09■■□□□ 1.45
PPP4R1-215ENST00000580182 EXOSC9Q06265 439 aaKnown RBP24.09■■□□□ 1.45
PPP4R1-215ENST00000580182 ERFEQ4G0M1 354 aa24.09■■□□□ 1.45
PPP4R1-215ENST00000580182 CCDC30Q5VVM6 783 aa24.09■■□□□ 1.45
PPP4R1-215ENST00000580182 ANKRD13DQ6ZTN6 518 aa24.09■■□□□ 1.45
PPP4R1-215ENST00000580182 ZNF622Q969S3 477 aaKnown RBP eCLIP24.09■■□□□ 1.453e-8■□□□□ 10.5
PPP4R1-215ENST00000580182 ARFGEF1Q9Y6D6 1849 aa24.08■■□□□ 1.45
PPP4R1-215ENST00000580182 TCIRG1Q13488 830 aa24.08■■□□□ 1.45
PPP4R1-215ENST00000580182 ARHGAP27Q6ZUM4 889 aa24.08■■□□□ 1.45
PPP4R1-215ENST00000580182 PLBD2Q8NHP8 589 aa24.08■■□□□ 1.45
PPP4R1-215ENST00000580182 ZNF428Q96B54 188 aa24.08■■□□□ 1.45
PPP4R1-215ENST00000580182 NYXQ9GZU5 481 aa24.08■■□□□ 1.45
PPP4R1-215ENST00000580182 NTSR2O95665 410 aa24.07■■□□□ 1.44
PPP4R1-215ENST00000580182 GOLGA2Q08379 1002 aa24.07■■□□□ 1.44
PPP4R1-215ENST00000580182 TTLL6Q8N841 843 aa24.07■■□□□ 1.44
PPP4R1-215ENST00000580182 ANKRD36CQ5JPF3 1778 aa24.06■■□□□ 1.44
PPP4R1-215ENST00000580182 SRGNP10124 158 aa24.06■■□□□ 1.44
PPP4R1-215ENST00000580182 HSP90AB3PQ58FF7 597 aa24.06■■□□□ 1.44
PPP4R1-215ENST00000580182 PDZRN3Q9UPQ7 1066 aa24.06■■□□□ 1.44
PPP4R1-215ENST00000580182 TNRC6CQ9HCJ0 1690 aaKnown RBP24.05■■□□□ 1.44
PPP4R1-215ENST00000580182 IBTKQ9P2D0 1353 aaPredicted RBP24.05■■□□□ 1.44
PPP4R1-215ENST00000580182 KLRG2A4D1S0 409 aaPredicted RBP24.05■■□□□ 1.44
PPP4R1-215ENST00000580182 VAMP4O75379 141 aa24.05■■□□□ 1.44
PPP4R1-215ENST00000580182 PARP10Q53GL7 1025 aa24.05■■□□□ 1.44
PPP4R1-215ENST00000580182 NLRP10Q86W26 655 aa24.05■■□□□ 1.44
PPP4R1-215ENST00000580182 MYH16Q9H6N6 1097 aa24.05■■□□□ 1.44
PPP4R1-215ENST00000580182 PPP1R42Q7Z4L9 355 aa24.04■■□□□ 1.44
PPP4R1-215ENST00000580182 ATP5J2-PTCD1G3V325 749 aa24.03■■□□□ 1.44
PPP4R1-215ENST00000580182 STYK1Q6J9G0 422 aa24.03■■□□□ 1.44
PPP4R1-215ENST00000580182 RIC3Q7Z5B4 369 aa24.03■■□□□ 1.44
PPP4R1-215ENST00000580182 MASTLQ96GX5 879 aa24.03■■□□□ 1.44
PPP4R1-215ENST00000580182 UTP14AQ9BVJ6 771 aaKnown RBP24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms