RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 RNFT1Q5M7Z0 435 aa7.05□□□□□ -1.28
CDH8-206ENST00000580044 CC2D2BQ6DHV5 1058 aa7.05□□□□□ -1.28
CDH8-206ENST00000580044 B4GALNT3Q6L9W6 998 aa7.05□□□□□ -1.28
CDH8-206ENST00000580044 GAS2L1Q99501 681 aaPredicted RBP7.05□□□□□ -1.28
CDH8-206ENST00000580044 KRTAP4-6Q9BYQ5 205 aa7.05□□□□□ -1.28
CDH8-206ENST00000580044 PRDM15P57071 1507 aaPredicted RBP7.05□□□□□ -1.28
CDH8-206ENST00000580044 ZNF644Q9H582 1327 aaPredicted RBP7.04□□□□□ -1.28
CDH8-206ENST00000580044 NEUROD2Q15784 382 aa7.04□□□□□ -1.28
CDH8-206ENST00000580044 FOXD4L5Q5VV16 416 aaPredicted RBP7.04□□□□□ -1.28
CDH8-206ENST00000580044 TRIM22Q8IYM9 498 aa7.04□□□□□ -1.28
CDH8-206ENST00000580044 NEDD1Q8NHV4 660 aa7.04□□□□□ -1.28
CDH8-206ENST00000580044 TMC1Q8TDI8 760 aa7.04□□□□□ -1.28
CDH8-206ENST00000580044 PNISRQ8TF01 805 aaKnown RBP7.04□□□□□ -1.28
CDH8-206ENST00000580044 DNMT3AQ9Y6K1 912 aaPredicted RBP7.04□□□□□ -1.28
CDH8-206ENST00000580044 NUP155O75694 1391 aa7.04□□□□□ -1.28
CDH8-206ENST00000580044 SAMD9LQ8IVG5 1584 aa7.03□□□□□ -1.28
CDH8-206ENST00000580044 GIGYF1O75420 1035 aaPredicted RBP7.03□□□□□ -1.28
CDH8-206ENST00000580044 RHOQP17081 205 aa7.03□□□□□ -1.28
CDH8-206ENST00000580044 BEND7Q8N7W2 519 aaPredicted RBP7.03□□□□□ -1.28
CDH8-206ENST00000580044 CARD11Q9BXL7 1154 aa7.03□□□□□ -1.28
CDH8-206ENST00000580044 MBIPQ9NS73 344 aa7.03□□□□□ -1.28
CDH8-206ENST00000580044 DYRK1BQ9Y463 629 aa7.03□□□□□ -1.28
CDH8-206ENST00000580044 COL17A1Q9UMD9 1497 aaPredicted RBP7.03□□□□□ -1.28
CDH8-206ENST00000580044 PRAG1Q86YV5 1406 aa7.02□□□□□ -1.29
CDH8-206ENST00000580044 SENP3-EIF4A1A0A087X0R7 540 aa7.02□□□□□ -1.29
CDH8-206ENST00000580044 A0A1W2PRU2 124 aa7.02□□□□□ -1.29
CDH8-206ENST00000580044 PLEKHD1A6NEE1 506 aa7.02□□□□□ -1.29
CDH8-206ENST00000580044 MYCP01106 439 aaPredicted RBP7.02□□□□□ -1.29
CDH8-206ENST00000580044 TSPY4P0CV99 314 aa7.02□□□□□ -1.29
CDH8-206ENST00000580044 TSPY10P0CW01 314 aa7.02□□□□□ -1.29
CDH8-206ENST00000580044 GPAT2Q6NUI2 795 aa7.02□□□□□ -1.29
CDH8-206ENST00000580044 NLRP13Q86W25 1043 aa7.02□□□□□ -1.29
CDH8-206ENST00000580044 IPO9Q96P70 1041 aaKnown RBP7.02□□□□□ -1.29
CDH8-206ENST00000580044 GPRASP1Q5JY77 1395 aa7.02□□□□□ -1.29
CDH8-206ENST00000580044 PARD3Q8TEW0 1356 aa7.02□□□□□ -1.29
CDH8-206ENST00000580044 ATP10AO60312 1499 aa7.02□□□□□ -1.29
CDH8-206ENST00000580044 CCDC144AA2RUR9 1427 aa7.01□□□□□ -1.29
CDH8-206ENST00000580044 BLMP54132 1417 aaPredicted RBP7.01□□□□□ -1.29
CDH8-206ENST00000580044 ATP10BO94823 1461 aa7.01□□□□□ -1.29
CDH8-206ENST00000580044 MAGI2Q86UL8 1455 aa7.01□□□□□ -1.29
CDH8-206ENST00000580044 TCERG1O14776 1098 aaKnown RBP7.01□□□□□ -1.29
CDH8-206ENST00000580044 NR1H3Q13133 447 aa7.01□□□□□ -1.29
CDH8-206ENST00000580044 SUZ12Q15022 739 aaKnown RBP7.01□□□□□ -1.29
CDH8-206ENST00000580044 WDR44Q5JSH3 913 aa7.01□□□□□ -1.29
CDH8-206ENST00000580044 IL27Q8NEV9 243 aa7.01□□□□□ -1.29
CDH8-206ENST00000580044 PHF24Q9UPV7 400 aa7.01□□□□□ -1.29
CDH8-206ENST00000580044 CEP152O94986 1710 aa7.01□□□□□ -1.29
CDH8-206ENST00000580044 DUOX2Q9NRD8 1548 aa7.01□□□□□ -1.29
CDH8-206ENST00000580044 IQGAP1P46940 1657 aa7□□□□□ -1.29
CDH8-206ENST00000580044 ERCC6Q03468 1493 aa7□□□□□ -1.29
CDH8-206ENST00000580044 ARHGEF15O94989 841 aa7□□□□□ -1.29
CDH8-206ENST00000580044 MX2P20592 715 aa7□□□□□ -1.29
CDH8-206ENST00000580044 POU4F2Q12837 409 aa7□□□□□ -1.29
CDH8-206ENST00000580044 FBXO31Q5XUX0 539 aaPredicted RBP7□□□□□ -1.29
CDH8-206ENST00000580044 TAS1R3Q7RTX0 852 aa7□□□□□ -1.29
CDH8-206ENST00000580044 WHAMMQ8TF30 809 aa7□□□□□ -1.29
CDH8-206ENST00000580044 TIMMDC1Q9NPL8 285 aa7□□□□□ -1.29
CDH8-206ENST00000580044 PCDHB11Q9Y5F2 797 aa7□□□□□ -1.29
CDH8-206ENST00000580044 SPHKAPQ2M3C7 1700 aa7□□□□□ -1.29
CDH8-206ENST00000580044 SHROOM2Q13796 1616 aa7□□□□□ -1.29
CDH8-206ENST00000580044 CLASP1Q7Z460 1538 aa7□□□□□ -1.29
CDH8-206ENST00000580044 SYNMO15061 1565 aa6.99□□□□□ -1.29
CDH8-206ENST00000580044 KIAA1210Q9ULL0 1709 aa6.99□□□□□ -1.29
CDH8-206ENST00000580044 ARID3CA6NKF2 412 aa6.99□□□□□ -1.29
CDH8-206ENST00000580044 CELA2BP08218 269 aaPredicted RBP6.99□□□□□ -1.29
CDH8-206ENST00000580044 FBXO45P0C2W1 286 aa6.99□□□□□ -1.29
CDH8-206ENST00000580044 CSB-PGBD3P0DP91 1061 aa6.99□□□□□ -1.29
CDH8-206ENST00000580044 RRP1P56182 461 aaKnown RBP6.99□□□□□ -1.29
CDH8-206ENST00000580044 ERVK-9P63128 1117 aa6.99□□□□□ -1.29
CDH8-206ENST00000580044 CLN3Q13286 438 aa6.99□□□□□ -1.29
CDH8-206ENST00000580044 ZNF326Q5BKZ1 582 aaKnown RBP6.99□□□□□ -1.29
CDH8-206ENST00000580044 LYPD4Q6UWN0 246 aa6.99□□□□□ -1.29
CDH8-206ENST00000580044 PGBD3Q8N328 593 aa6.99□□□□□ -1.29
CDH8-206ENST00000580044 BANK1Q8NDB2 785 aa6.99□□□□□ -1.29
CDH8-206ENST00000580044 CHMP7Q8WUX9 453 aaPredicted RBP6.99□□□□□ -1.29
CDH8-206ENST00000580044 ZNF837Q96EG3 531 aaPredicted RBP6.99□□□□□ -1.29
CDH8-206ENST00000580044 TRIM34Q9BYJ4 488 aa6.99□□□□□ -1.29
CDH8-206ENST00000580044 NDUFB9Q9Y6M9 179 aa6.99□□□□□ -1.29
CDH8-206ENST00000580044 ERBINQ96RT1 1412 aa6.99□□□□□ -1.29
CDH8-206ENST00000580044 VIRMAQ69YN4 1812 aaKnown RBP6.99□□□□□ -1.29
CDH8-206ENST00000580044 NEURL4Q96JN8 1562 aa6.99□□□□□ -1.29
CDH8-206ENST00000580044 F11P03951 625 aa6.98□□□□□ -1.29
CDH8-206ENST00000580044 BCRP11274 1271 aa6.98□□□□□ -1.29
CDH8-206ENST00000580044 DEKP35659 375 aaKnown RBP6.98□□□□□ -1.29
CDH8-206ENST00000580044 GTPBP3Q969Y2 492 aaKnown RBP6.98□□□□□ -1.29
CDH8-206ENST00000580044 POLR3GLQ9BT43 218 aa6.98□□□□□ -1.29
CDH8-206ENST00000580044 NUCKS1Q9H1E3 243 aaKnown RBP6.98□□□□□ -1.29
CDH8-206ENST00000580044 USP35Q9P2H5 1018 aa6.98□□□□□ -1.29
CDH8-206ENST00000580044 RCAN3Q9UKA8 241 aa6.98□□□□□ -1.29
CDH8-206ENST00000580044 ZNF777Q9ULD5 760 aaPredicted RBP6.98□□□□□ -1.29
CDH8-206ENST00000580044 ARHGAP5Q13017 1502 aa6.97□□□□□ -1.29
CDH8-206ENST00000580044 SYCP2Q9BX26 1530 aa6.97□□□□□ -1.29
CDH8-206ENST00000580044 ST20-MTHFSA0A0A6YYL1 179 aa6.97□□□□□ -1.29
CDH8-206ENST00000580044 GNRH1P01148 92 aa6.97□□□□□ -1.29
CDH8-206ENST00000580044 MAP2K3P46734 347 aa6.97□□□□□ -1.29
CDH8-206ENST00000580044 ESCO1Q5FWF5 840 aa6.97□□□□□ -1.29
CDH8-206ENST00000580044 GNASQ5JWF2 1037 aa6.97□□□□□ -1.29
CDH8-206ENST00000580044 NBPF10Q6P3W6 841 aaKnown RBP6.97□□□□□ -1.29
CDH8-206ENST00000580044 TTC37Q6PGP7 1564 aa6.97□□□□□ -1.29
CDH8-206ENST00000580044 NBPF15Q8N660 670 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms