RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 NT5C2P49902 561 aa5.88□□□□□ -1.47
NF1-219ENST00000579081 UQCRHLA0A096LP55 91 aa5.88□□□□□ -1.47
NF1-219ENST00000579081 UQCRHP07919 91 aa5.88□□□□□ -1.47
NF1-219ENST00000579081 ERCC3P19447 782 aa5.88□□□□□ -1.47
NF1-219ENST00000579081 PRKAR2BP31323 418 aa5.88□□□□□ -1.47
NF1-219ENST00000579081 MTHFSP49914 203 aa5.88□□□□□ -1.47
NF1-219ENST00000579081 OTUD6BQ8N6M0 293 aa5.88□□□□□ -1.47
NF1-219ENST00000579081 CTCFLQ8NI51 663 aaPredicted RBP5.88□□□□□ -1.47
NF1-219ENST00000579081 ZNF652Q9Y2D9 606 aa5.88□□□□□ -1.47
NF1-219ENST00000579081 MINDY4BA8MYZ0 360 aa5.88□□□□□ -1.47
NF1-219ENST00000579081 YEATS4O95619 227 aa5.88□□□□□ -1.47
NF1-219ENST00000579081 IFIT1P09914 478 aaKnown RBP5.88□□□□□ -1.47
NF1-219ENST00000579081 GSDMDP57764 484 aa5.88□□□□□ -1.47
NF1-219ENST00000579081 METTL24Q5JXM2 366 aa5.88□□□□□ -1.47
NF1-219ENST00000579081 APBB1IPQ7Z5R6 666 aaPredicted RBP5.88□□□□□ -1.47
NF1-219ENST00000579081 VTI1AQ96AJ9 217 aa5.88□□□□□ -1.47
NF1-219ENST00000579081 USP47Q96K76 1375 aa5.88□□□□□ -1.47
NF1-219ENST00000579081 KIF3CO14782 793 aa5.88□□□□□ -1.47
NF1-219ENST00000579081 FAM69CQ0P6D2 419 aa5.88□□□□□ -1.47
NF1-219ENST00000579081 HLTFQ14527 1009 aaKnown RBP eCLIP5.88□□□□□ -1.477e-8■■■■□ 22.5
NF1-219ENST00000579081 SPTY2D1Q68D10 685 aaPredicted RBP5.88□□□□□ -1.47
NF1-219ENST00000579081 CEP83Q9Y592 693 aa5.88□□□□□ -1.47
NF1-219ENST00000579081 SH3BP5O60239 455 aa5.88□□□□□ -1.47
NF1-219ENST00000579081 CCDC40Q4G0X9 1142 aa5.88□□□□□ -1.47
NF1-219ENST00000579081 KLHL10Q6JEL2 608 aa5.88□□□□□ -1.47
NF1-219ENST00000579081 SLF2Q8IX21 1173 aa5.88□□□□□ -1.47
NF1-219ENST00000579081 JPH4Q96JJ6 628 aa5.88□□□□□ -1.47
NF1-219ENST00000579081 TDRD9Q8NDG6 1382 aaKnown RBP5.88□□□□□ -1.47
NF1-219ENST00000579081 PDE3AQ14432 1141 aa5.88□□□□□ -1.47
NF1-219ENST00000579081 STMN4Q9H169 189 aaPredicted RBP5.88□□□□□ -1.47
NF1-219ENST00000579081 ANAPC4Q9UJX5 808 aa5.88□□□□□ -1.47
NF1-219ENST00000579081 CTAGE5O15320 804 aa5.87□□□□□ -1.47
NF1-219ENST00000579081 URI1O94763 535 aaPredicted RBP5.87□□□□□ -1.47
NF1-219ENST00000579081 PRPF4BQ13523 1007 aaKnown RBP5.87□□□□□ -1.47
NF1-219ENST00000579081 GBP7Q8N8V2 638 aaPredicted RBP5.87□□□□□ -1.47
NF1-219ENST00000579081 TSC1Q92574 1164 aa5.87□□□□□ -1.47
NF1-219ENST00000579081 RABEP2Q9H5N1 569 aa5.87□□□□□ -1.47
NF1-219ENST00000579081 USP25Q9UHP3 1055 aa5.87□□□□□ -1.47
NF1-219ENST00000579081 ZPR1O75312 459 aa5.87□□□□□ -1.47
NF1-219ENST00000579081 MXRA7P84157 204 aa5.87□□□□□ -1.47
NF1-219ENST00000579081 TCERG1LQ5VWI1 586 aa5.87□□□□□ -1.47
NF1-219ENST00000579081 ATF7IPQ6VMQ6 1270 aa5.87□□□□□ -1.47
NF1-219ENST00000579081 K7ELQ4 463 aaPredicted RBP5.87□□□□□ -1.47
NF1-219ENST00000579081 TXNDC2Q86VQ3 553 aa5.87□□□□□ -1.47
NF1-219ENST00000579081 ALS2CR12Q96Q35 445 aa5.87□□□□□ -1.47
NF1-219ENST00000579081 RABGAP1Q9Y3P9 1069 aa5.87□□□□□ -1.47
NF1-219ENST00000579081 CCDC196A0A1B0GTZ2 297 aa5.87□□□□□ -1.47
NF1-219ENST00000579081 MTIF2P46199 727 aaKnown RBP5.87□□□□□ -1.47
NF1-219ENST00000579081 TPD52P55327 224 aaPredicted RBP5.87□□□□□ -1.47
NF1-219ENST00000579081 ARMC9Q7Z3E5 817 aa5.87□□□□□ -1.47
NF1-219ENST00000579081 ZNF710Q8N1W2 664 aa5.87□□□□□ -1.47
NF1-219ENST00000579081 CCDC85AQ96PX6 553 aaPredicted RBP5.87□□□□□ -1.47
NF1-219ENST00000579081 AKAP2Q9Y2D5 859 aa5.87□□□□□ -1.47
NF1-219ENST00000579081 PDS5BQ9NTI5 1447 aa5.87□□□□□ -1.47
NF1-219ENST00000579081 SNAPC4Q5SXM2 1469 aa5.87□□□□□ -1.47
NF1-219ENST00000579081 CCDC194A0A1B0GVG4 234 aa5.87□□□□□ -1.47
NF1-219ENST00000579081 STARD3NLO95772 234 aa5.87□□□□□ -1.47
NF1-219ENST00000579081 NOP2P46087 812 aaKnown RBP5.87□□□□□ -1.47
NF1-219ENST00000579081 MAP3K11Q16584 847 aa5.87□□□□□ -1.47
NF1-219ENST00000579081 CABP5Q9NP86 173 aa5.87□□□□□ -1.47
NF1-219ENST00000579081 MKRN1Q9UHC7 482 aaKnown RBP5.87□□□□□ -1.47
NF1-219ENST00000579081 ARHGEF12Q9NZN5 1544 aa5.87□□□□□ -1.47
NF1-219ENST00000579081 TOP1P11387 765 aaKnown RBP5.87□□□□□ -1.47
NF1-219ENST00000579081 SFPQP23246 707 aaKnown RBP eCLIP5.87□□□□□ -1.47
NF1-219ENST00000579081 NLRP5P59047 1200 aa5.87□□□□□ -1.47
NF1-219ENST00000579081 NBPF1Q3BBV0 1214 aa5.87□□□□□ -1.47
NF1-219ENST00000579081 SYCP3Q8IZU3 236 aa5.87□□□□□ -1.47
NF1-219ENST00000579081 PRDM11Q9NQV5 511 aa5.87□□□□□ -1.47
NF1-219ENST00000579081 ZNF219Q9P2Y4 722 aaPredicted RBP5.87□□□□□ -1.47
NF1-219ENST00000579081 A0A1B0GUA9 196 aa5.87□□□□□ -1.47
NF1-219ENST00000579081 CCDC174Q6PII3 467 aa5.87□□□□□ -1.47
NF1-219ENST00000579081 BBXQ8WY36 941 aaPredicted RBP5.87□□□□□ -1.47
NF1-219ENST00000579081 BICD1Q96G01 975 aa5.87□□□□□ -1.47
NF1-219ENST00000579081 SOS1Q07889 1333 aaPredicted RBP5.87□□□□□ -1.47
NF1-219ENST00000579081 STX6O43752 255 aa5.86□□□□□ -1.47
NF1-219ENST00000579081 MAATS1Q7Z4T9 603 aa5.86□□□□□ -1.47
NF1-219ENST00000579081 NUP88Q99567 741 aaPredicted RBP5.86□□□□□ -1.47
NF1-219ENST00000579081 ANO10Q9NW15 660 aa5.86□□□□□ -1.47
NF1-219ENST00000579081 CC2D2AQ9P2K1 1620 aa5.86□□□□□ -1.47
NF1-219ENST00000579081 BRD2P25440 801 aaKnown RBP5.86□□□□□ -1.47
NF1-219ENST00000579081 PTPN14Q15678 1187 aa5.86□□□□□ -1.47
NF1-219ENST00000579081 CWC27Q6UX04 472 aaKnown RBP5.86□□□□□ -1.47
NF1-219ENST00000579081 CALML4Q96GE6 196 aa5.86□□□□□ -1.47
NF1-219ENST00000579081 RMDN2Q96LZ7 410 aa5.86□□□□□ -1.47
NF1-219ENST00000579081 IQCGQ9H095 443 aaKnown RBP5.86□□□□□ -1.47
NF1-219ENST00000579081 ANKIB1Q9P2G1 1089 aa5.86□□□□□ -1.47
NF1-219ENST00000579081 ATP8B1O43520 1251 aa5.86□□□□□ -1.47
NF1-219ENST00000579081 KIF4AO95239 1232 aa5.86□□□□□ -1.47
NF1-219ENST00000579081 PSMC4P43686 418 aa5.86□□□□□ -1.47
NF1-219ENST00000579081 TRMT1LQ7Z2T5 733 aaKnown RBP5.86□□□□□ -1.47
NF1-219ENST00000579081 TCP11L2Q8N4U5 519 aa5.86□□□□□ -1.47
NF1-219ENST00000579081 ELP1O95163 1332 aa5.86□□□□□ -1.47
NF1-219ENST00000579081 A0A1W2PRG0 241 aa5.86□□□□□ -1.47
NF1-219ENST00000579081 AMPD3Q01432 767 aa5.86□□□□□ -1.47
NF1-219ENST00000579081 WDR66Q8TBY9 1149 aa5.86□□□□□ -1.47
NF1-219ENST00000579081 CPLX3Q8WVH0 158 aa5.86□□□□□ -1.47
NF1-219ENST00000579081 SYNCQ9H7C4 482 aa5.86□□□□□ -1.47
NF1-219ENST00000579081 NOB1Q9ULX3 412 aaKnown RBP5.86□□□□□ -1.47
NF1-219ENST00000579081 FRMD3A2A2Y4 597 aa5.86□□□□□ -1.47
NF1-219ENST00000579081 RANBP6O60518 1105 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms