RNA–Protein interactions for RNA: ENST00000578845.2

CDKN2A-212, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-212ENST00000578845 NBPF5PQ86XG9 351 aaPredicted RBP30.07■■■□□ 2.4
CDKN2A-212ENST00000578845 NMRK2Q9NPI5 230 aa30.07■■■□□ 2.4
CDKN2A-212ENST00000578845 NFKBIEO00221 500 aa30.06■■■□□ 2.4
CDKN2A-212ENST00000578845 SRGNP10124 158 aa30.06■■■□□ 2.4
CDKN2A-212ENST00000578845 HSPA6P17066 643 aa30.06■■■□□ 2.4
CDKN2A-212ENST00000578845 TMPOP42166 694 aaKnown RBP30.06■■■□□ 2.4
CDKN2A-212ENST00000578845 PRELPP51888 382 aa30.06■■■□□ 2.4
CDKN2A-212ENST00000578845 STYK1Q6J9G0 422 aa30.06■■■□□ 2.4
CDKN2A-212ENST00000578845 ZNF622Q969S3 477 aaKnown RBP eCLIP30.06■■■□□ 2.4
CDKN2A-212ENST00000578845 BABAM1Q9NWV8 329 aa30.06■■■□□ 2.4
CDKN2A-212ENST00000578845 NPHP1O15259 732 aa30.05■■■□□ 2.4
CDKN2A-212ENST00000578845 TOMM70O94826 608 aa30.05■■■□□ 2.4
CDKN2A-212ENST00000578845 LMOD3Q0VAK6 560 aa30.05■■■□□ 2.4
CDKN2A-212ENST00000578845 NIP7Q9Y221 180 aaKnown RBP eCLIP30.05■■■□□ 2.4
CDKN2A-212ENST00000578845 ERBB4Q15303 1308 aa30.04■■■□□ 2.4
CDKN2A-212ENST00000578845 KDM2BQ8NHM5 1336 aa30.04■■■□□ 2.4
CDKN2A-212ENST00000578845 KLRG2A4D1S0 409 aaPredicted RBP30.04■■■□□ 2.4
CDKN2A-212ENST00000578845 ERVV-1B6SEH8 477 aa30.03■■■□□ 2.4
CDKN2A-212ENST00000578845 HLFQ16534 295 aa30.03■■■□□ 2.4
CDKN2A-212ENST00000578845 CNKSR1Q969H4 720 aa30.03■■■□□ 2.4
CDKN2A-212ENST00000578845 TSPYL4Q9UJ04 414 aa30.03■■■□□ 2.4
CDKN2A-212ENST00000578845 ARFGEF2Q9Y6D5 1785 aa30.03■■■□□ 2.4
CDKN2A-212ENST00000578845 TPTE2Q6XPS3 522 aa30.02■■■□□ 2.4
CDKN2A-212ENST00000578845 MASTLQ96GX5 879 aa30.02■■■□□ 2.4
CDKN2A-212ENST00000578845 TNRC6CQ9HCJ0 1690 aaKnown RBP30.01■■■□□ 2.39
CDKN2A-212ENST00000578845 MAP3K15Q6ZN16 1313 aa30■■■□□ 2.39
CDKN2A-212ENST00000578845 FER1L6Q2WGJ9 1857 aa30■■■□□ 2.39
CDKN2A-212ENST00000578845 C21orf2O43822 256 aa30■■■□□ 2.39
CDKN2A-212ENST00000578845 LTBP3Q9NS15 1303 aa29.99■■■□□ 2.39
CDKN2A-212ENST00000578845 PRKRIP1Q9H875 184 aaPredicted RBP29.99■■■□□ 2.39
CDKN2A-212ENST00000578845 PRPF40BQ6NWY9 871 aaKnown RBP29.98■■■□□ 2.39
CDKN2A-212ENST00000578845 RRP7AQ9Y3A4 280 aaKnown RBP29.98■■■□□ 2.39
CDKN2A-212ENST00000578845 TIAM2Q8IVF5 1701 aa29.98■■■□□ 2.39
CDKN2A-212ENST00000578845 SLX4Q8IY92 1834 aa29.98■■■□□ 2.39
CDKN2A-212ENST00000578845 TTLL7Q6ZT98 887 aa29.97■■■□□ 2.39
CDKN2A-212ENST00000578845 RBM46Q8TBY0 533 aaKnown RBP29.97■■■□□ 2.39
CDKN2A-212ENST00000578845 RUNDC1Q96C34 613 aa29.97■■■□□ 2.39
CDKN2A-212ENST00000578845 NPR1P16066 1061 aa29.96■■■□□ 2.39
CDKN2A-212ENST00000578845 WDR43Q15061 677 aaKnown RBP eCLIP29.96■■■□□ 2.39
CDKN2A-212ENST00000578845 SOGA3Q5TF21 947 aa29.96■■■□□ 2.39
CDKN2A-212ENST00000578845 KIF6Q6ZMV9 814 aa29.96■■■□□ 2.39
CDKN2A-212ENST00000578845 CCDC146Q8IYE0 955 aa29.96■■■□□ 2.39
CDKN2A-212ENST00000578845 NUP98P52948 1817 aa29.96■■■□□ 2.39
CDKN2A-212ENST00000578845 IBTKQ9P2D0 1353 aaPredicted RBP29.95■■■□□ 2.39
CDKN2A-212ENST00000578845 MYL6BP14649 208 aa29.95■■■□□ 2.39
CDKN2A-212ENST00000578845 LRP10Q7Z4F1 713 aa29.95■■■□□ 2.39
CDKN2A-212ENST00000578845 NGEFQ8N5V2 710 aa29.95■■■□□ 2.39
CDKN2A-212ENST00000578845 GLTPD2A6NH11 291 aa29.94■■■□□ 2.38
CDKN2A-212ENST00000578845 C7orf43Q8WVR3 580 aa29.94■■■□□ 2.38
CDKN2A-212ENST00000578845 CCDC88AQ3V6T2 1871 aa29.93■■■□□ 2.38
CDKN2A-212ENST00000578845 PDIA6Q15084 440 aa29.93■■■□□ 2.38
CDKN2A-212ENST00000578845 NYXQ9GZU5 481 aa29.93■■■□□ 2.38
CDKN2A-212ENST00000578845 ZNF219Q9P2Y4 722 aaPredicted RBP29.93■■■□□ 2.38
CDKN2A-212ENST00000578845 ADAMTS8Q9UP79 889 aa29.93■■■□□ 2.38
CDKN2A-212ENST00000578845 TRIM35Q9UPQ4 493 aa29.93■■■□□ 2.38
CDKN2A-212ENST00000578845 RIC1Q4ADV7 1423 aa29.93■■■□□ 2.38
CDKN2A-212ENST00000578845 TAOK3Q9H2K8 898 aa29.92■■■□□ 2.38
CDKN2A-212ENST00000578845 RRAGCQ9HB90 399 aa29.92■■■□□ 2.38
CDKN2A-212ENST00000578845 CACNA1SQ13698 1873 aa29.91■■■□□ 2.38
CDKN2A-212ENST00000578845 DICER1Q9UPY3 1922 aaKnown RBP29.91■■■□□ 2.38
CDKN2A-212ENST00000578845 CHL1O00533 1208 aa29.91■■■□□ 2.38
CDKN2A-212ENST00000578845 C16orf71Q8IYS4 520 aaPredicted RBP29.91■■■□□ 2.38
CDKN2A-212ENST00000578845 ABCC12Q96J65 1359 aa29.9■■■□□ 2.38
CDKN2A-212ENST00000578845 FAM177BA6PVY3 158 aa29.9■■■□□ 2.38
CDKN2A-212ENST00000578845 GIGYF2Q6Y7W6 1299 aaKnown RBP29.9■■■□□ 2.38
CDKN2A-212ENST00000578845 ZBTB3Q9H5J0 574 aa29.9■■■□□ 2.38
CDKN2A-212ENST00000578845 UBN2Q6ZU65 1347 aa29.9■■■□□ 2.38
CDKN2A-212ENST00000578845 FSTL1Q12841 308 aa29.89■■■□□ 2.38
CDKN2A-212ENST00000578845 NEUROD2Q15784 382 aa29.89■■■□□ 2.38
CDKN2A-212ENST00000578845 CRY2Q49AN0 593 aa29.89■■■□□ 2.38
CDKN2A-212ENST00000578845 ZNF34Q8IZ26 560 aa29.89■■■□□ 2.38
CDKN2A-212ENST00000578845 GTF2E1P29083 439 aaPredicted RBP29.88■■■□□ 2.37
CDKN2A-212ENST00000578845 APLP1P51693 650 aa29.88■■■□□ 2.37
CDKN2A-212ENST00000578845 EIF2S2P20042 333 aaKnown RBP29.87■■■□□ 2.37
CDKN2A-212ENST00000578845 ERFEQ4G0M1 354 aa29.87■■■□□ 2.37
CDKN2A-212ENST00000578845 CCDC93Q567U6 631 aa29.87■■■□□ 2.37
CDKN2A-212ENST00000578845 PROSER3Q2NL68 480 aa29.86■■■□□ 2.37
CDKN2A-212ENST00000578845 WDR90Q96KV7 1748 aa29.85■■■□□ 2.37
CDKN2A-212ENST00000578845 VEGFAP15692 232 aaPredicted RBP29.85■■■□□ 2.37
CDKN2A-212ENST00000578845 ALDH1B1P30837 517 aa29.85■■■□□ 2.37
CDKN2A-212ENST00000578845 NUTM1Q86Y26 1132 aa29.85■■■□□ 2.37
CDKN2A-212ENST00000578845 NTSR2O95665 410 aa29.84■■■□□ 2.37
CDKN2A-212ENST00000578845 GPTP24298 496 aa29.84■■■□□ 2.37
CDKN2A-212ENST00000578845 SUSD4Q5VX71 490 aa29.84■■■□□ 2.37
CDKN2A-212ENST00000578845 PARP10Q53GL7 1025 aa29.83■■■□□ 2.37
CDKN2A-212ENST00000578845 DPY19L2Q6NUT2 758 aa29.83■■■□□ 2.37
CDKN2A-212ENST00000578845 SNED1Q8TER0 1413 aa29.82■■■□□ 2.36
CDKN2A-212ENST00000578845 HOXB7P09629 217 aa29.82■■■□□ 2.36
CDKN2A-212ENST00000578845 ANXA1P04083 346 aa29.81■■■□□ 2.36
CDKN2A-212ENST00000578845 HOXA10P31260 410 aaPredicted RBP29.81■■■□□ 2.36
CDKN2A-212ENST00000578845 FKBP4Q02790 459 aaKnown RBP eCLIP29.81■■■□□ 2.36
CDKN2A-212ENST00000578845 POTECB2RU33 542 aa29.8■■■□□ 2.36
CDKN2A-212ENST00000578845 KRT24Q2M2I5 525 aa29.8■■■□□ 2.36
CDKN2A-212ENST00000578845 RTKN2Q8IZC4 609 aa29.8■■■□□ 2.36
CDKN2A-212ENST00000578845 CFAP44Q96MT7 982 aa29.8■■■□□ 2.36
CDKN2A-212ENST00000578845 DDX21Q9NR30 783 aaKnown RBP eCLIP29.8■■■□□ 2.36
CDKN2A-212ENST00000578845 PPP1R42Q7Z4L9 355 aa29.79■■■□□ 2.36
CDKN2A-212ENST00000578845 SMC1BQ8NDV3 1235 aa29.79■■■□□ 2.36
CDKN2A-212ENST00000578845 COPS6Q7L5N1 327 aa29.78■■■□□ 2.36
CDKN2A-212ENST00000578845 RNF123Q5XPI4 1314 aa29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms