RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 RRP7AQ9Y3A4 280 aaKnown RBP20.9■□□□□ 0.94
CRLF3-203ENST00000578692 RASSF7Q02833 373 aa20.89■□□□□ 0.93
CRLF3-203ENST00000578692 TSPYL4Q9UJ04 414 aa20.89■□□□□ 0.93
CRLF3-203ENST00000578692 NIP7Q9Y221 180 aaKnown RBP eCLIP20.89■□□□□ 0.93
CRLF3-203ENST00000578692 LMOD3Q0VAK6 560 aa20.88■□□□□ 0.93
CRLF3-203ENST00000578692 HLFQ16534 295 aa20.88■□□□□ 0.93
CRLF3-203ENST00000578692 TPTE2Q6XPS3 522 aa20.88■□□□□ 0.93
CRLF3-203ENST00000578692 NMRK2Q9NPI5 230 aa20.88■□□□□ 0.93
CRLF3-203ENST00000578692 LAMB4A4D0S4 1761 aa20.88■□□□□ 0.93
CRLF3-203ENST00000578692 LMNB1P20700 586 aa20.87■□□□□ 0.93
CRLF3-203ENST00000578692 WDR43Q15061 677 aaKnown RBP eCLIP20.87■□□□□ 0.93
CRLF3-203ENST00000578692 CCDC146Q8IYE0 955 aa20.87■□□□□ 0.93
CRLF3-203ENST00000578692 C21orf2O43822 256 aa20.86■□□□□ 0.93
CRLF3-203ENST00000578692 TOMM70O94826 608 aa20.86■□□□□ 0.93
CRLF3-203ENST00000578692 SRGNP10124 158 aa20.86■□□□□ 0.93
CRLF3-203ENST00000578692 MYL6BP14649 208 aa20.86■□□□□ 0.93
CRLF3-203ENST00000578692 NEUROD2Q15784 382 aa20.86■□□□□ 0.93
CRLF3-203ENST00000578692 STYK1Q6J9G0 422 aa20.86■□□□□ 0.93
CRLF3-203ENST00000578692 CNKSR1Q969H4 720 aa20.86■□□□□ 0.93
CRLF3-203ENST00000578692 BABAM1Q9NWV8 329 aa20.86■□□□□ 0.93
CRLF3-203ENST00000578692 ZNF219Q9P2Y4 722 aaPredicted RBP20.86■□□□□ 0.93
CRLF3-203ENST00000578692 KDM2BQ8NHM5 1336 aa20.86■□□□□ 0.93
CRLF3-203ENST00000578692 ERVV-1B6SEH8 477 aa20.85■□□□□ 0.93
CRLF3-203ENST00000578692 RUNDC1Q96C34 613 aa20.85■□□□□ 0.93
CRLF3-203ENST00000578692 MASTLQ96GX5 879 aa20.85■□□□□ 0.93
CRLF3-203ENST00000578692 PRKRIP1Q9H875 184 aaPredicted RBP20.85■□□□□ 0.93
CRLF3-203ENST00000578692 FAM177BA6PVY3 158 aa20.85■□□□□ 0.93
CRLF3-203ENST00000578692 NFKBIEO00221 500 aa20.85■□□□□ 0.93
CRLF3-203ENST00000578692 HSPA6P17066 643 aa20.85■□□□□ 0.93
CRLF3-203ENST00000578692 PRELPP51888 382 aa20.85■□□□□ 0.93
CRLF3-203ENST00000578692 ADAMTS8Q9UP79 889 aa20.85■□□□□ 0.93
CRLF3-203ENST00000578692 KIF6Q6ZMV9 814 aa20.84■□□□□ 0.93
CRLF3-203ENST00000578692 TTLL7Q6ZT98 887 aa20.84■□□□□ 0.93
CRLF3-203ENST00000578692 COL11A2P13942 1736 aaPredicted RBP20.84■□□□□ 0.93
CRLF3-203ENST00000578692 MAP3K15Q6ZN16 1313 aa20.83■□□□□ 0.93
CRLF3-203ENST00000578692 GTF2E1P29083 439 aaPredicted RBP20.83■□□□□ 0.92
CRLF3-203ENST00000578692 RRAGCQ9HB90 399 aa20.83■□□□□ 0.92
CRLF3-203ENST00000578692 ZC3H4Q9UPT8 1303 aaKnown RBP20.83■□□□□ 0.92
CRLF3-203ENST00000578692 CCDC88AQ3V6T2 1871 aa20.82■□□□□ 0.92
CRLF3-203ENST00000578692 KLRG2A4D1S0 409 aaPredicted RBP20.82■□□□□ 0.92
CRLF3-203ENST00000578692 EIF2S2P20042 333 aaKnown RBP20.82■□□□□ 0.92
CRLF3-203ENST00000578692 ERBB4Q15303 1308 aa20.82■□□□□ 0.92
CRLF3-203ENST00000578692 NPR1P16066 1061 aa20.81■□□□□ 0.92
CRLF3-203ENST00000578692 PRPF40BQ6NWY9 871 aaKnown RBP20.81■□□□□ 0.92
CRLF3-203ENST00000578692 C16orf71Q8IYS4 520 aaPredicted RBP20.81■□□□□ 0.92
CRLF3-203ENST00000578692 TRIM35Q9UPQ4 493 aa20.81■□□□□ 0.92
CRLF3-203ENST00000578692 NUP98P52948 1817 aa20.8■□□□□ 0.92
CRLF3-203ENST00000578692 SLX4Q8IY92 1834 aa20.8■□□□□ 0.92
CRLF3-203ENST00000578692 NYXQ9GZU5 481 aa20.8■□□□□ 0.92
CRLF3-203ENST00000578692 ZBTB3Q9H5J0 574 aa20.8■□□□□ 0.92
CRLF3-203ENST00000578692 GLTPD2A6NH11 291 aa20.79■□□□□ 0.92
CRLF3-203ENST00000578692 CHL1O00533 1208 aa20.79■□□□□ 0.92
CRLF3-203ENST00000578692 PDIA6Q15084 440 aa20.79■□□□□ 0.92
CRLF3-203ENST00000578692 SOGA3Q5TF21 947 aa20.79■□□□□ 0.92
CRLF3-203ENST00000578692 FER1L6Q2WGJ9 1857 aa20.78■□□□□ 0.92
CRLF3-203ENST00000578692 GIGYF2Q6Y7W6 1299 aaKnown RBP20.78■□□□□ 0.92
CRLF3-203ENST00000578692 RBM46Q8TBY0 533 aaKnown RBP20.78■□□□□ 0.92
CRLF3-203ENST00000578692 LAS1LQ9Y4W2 734 aaKnown RBP20.78■□□□□ 0.92
CRLF3-203ENST00000578692 CACNA1SQ13698 1873 aa20.78■□□□□ 0.92
CRLF3-203ENST00000578692 LTBP3Q9NS15 1303 aa20.77■□□□□ 0.92
CRLF3-203ENST00000578692 TAOK3Q9H2K8 898 aa20.77■□□□□ 0.92
CRLF3-203ENST00000578692 GPTP24298 496 aa20.76■□□□□ 0.91
CRLF3-203ENST00000578692 ALDH1B1P30837 517 aa20.76■□□□□ 0.91
CRLF3-203ENST00000578692 ERFEQ4G0M1 354 aa20.76■□□□□ 0.91
CRLF3-203ENST00000578692 DPY19L2Q6NUT2 758 aa20.76■□□□□ 0.91
CRLF3-203ENST00000578692 LRP10Q7Z4F1 713 aa20.76■□□□□ 0.91
CRLF3-203ENST00000578692 NUTM1Q86Y26 1132 aa20.76■□□□□ 0.91
CRLF3-203ENST00000578692 ZNF34Q8IZ26 560 aa20.76■□□□□ 0.91
CRLF3-203ENST00000578692 C7orf43Q8WVR3 580 aa20.76■□□□□ 0.91
CRLF3-203ENST00000578692 ARFGEF2Q9Y6D5 1785 aa20.75■□□□□ 0.91
CRLF3-203ENST00000578692 ANXA1P04083 346 aa20.75■□□□□ 0.91
CRLF3-203ENST00000578692 SUSD4Q5VX71 490 aa20.75■□□□□ 0.91
CRLF3-203ENST00000578692 NECTIN2Q92692 538 aa20.75■□□□□ 0.91
CRLF3-203ENST00000578692 UBN2Q6ZU65 1347 aa20.75■□□□□ 0.91
CRLF3-203ENST00000578692 PROSER3Q2NL68 480 aa20.74■□□□□ 0.91
CRLF3-203ENST00000578692 TNRC6CQ9HCJ0 1690 aaKnown RBP20.74■□□□□ 0.91
CRLF3-203ENST00000578692 VEGFAP15692 232 aaPredicted RBP20.73■□□□□ 0.91
CRLF3-203ENST00000578692 ZEB1P37275 1124 aaPredicted RBP20.73■□□□□ 0.91
CRLF3-203ENST00000578692 KRT24Q2M2I5 525 aa20.73■□□□□ 0.91
CRLF3-203ENST00000578692 CCDC93Q567U6 631 aa20.73■□□□□ 0.91
CRLF3-203ENST00000578692 DICER1Q9UPY3 1922 aaKnown RBP20.73■□□□□ 0.91
CRLF3-203ENST00000578692 TIAM2Q8IVF5 1701 aa20.73■□□□□ 0.91
CRLF3-203ENST00000578692 APLP1P51693 650 aa20.72■□□□□ 0.91
CRLF3-203ENST00000578692 FSTL1Q12841 308 aa20.72■□□□□ 0.91
CRLF3-203ENST00000578692 CRY2Q49AN0 593 aa20.72■□□□□ 0.91
CRLF3-203ENST00000578692 COPS6Q7L5N1 327 aa20.72■□□□□ 0.91
CRLF3-203ENST00000578692 PPP1R42Q7Z4L9 355 aa20.72■□□□□ 0.91
CRLF3-203ENST00000578692 AIMP1Q12904 312 aaKnown RBP20.72■□□□□ 0.91
CRLF3-203ENST00000578692 PARP10Q53GL7 1025 aa20.72■□□□□ 0.91
CRLF3-203ENST00000578692 CFAP44Q96MT7 982 aa20.72■□□□□ 0.91
CRLF3-203ENST00000578692 ABCC12Q96J65 1359 aa20.71■□□□□ 0.91
CRLF3-203ENST00000578692 IBTKQ9P2D0 1353 aaPredicted RBP20.71■□□□□ 0.91
CRLF3-203ENST00000578692 APAF1O14727 1248 aa20.71■□□□□ 0.91
CRLF3-203ENST00000578692 RTKN2Q8IZC4 609 aa20.71■□□□□ 0.91
CRLF3-203ENST00000578692 DDX21Q9NR30 783 aaKnown RBP eCLIP20.71■□□□□ 0.91
CRLF3-203ENST00000578692 NTSR2O95665 410 aa20.7■□□□□ 0.9
CRLF3-203ENST00000578692 FKBP4Q02790 459 aaKnown RBP eCLIP20.7■□□□□ 0.9
CRLF3-203ENST00000578692 OLFM4Q6UX06 510 aa20.7■□□□□ 0.9
CRLF3-203ENST00000578692 XAGE3Q8WTP9 111 aa20.7■□□□□ 0.9
CRLF3-203ENST00000578692 RPGRQ92834 1020 aaKnown RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms