RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 SMARCA5O60264 1052 aaPredicted RBP13.65□□□□□ -0.22
SKA2-204ENST00000578519 GCKRQ14397 625 aa13.65□□□□□ -0.22
SKA2-204ENST00000578519 TBC1D9Q6ZT07 1266 aa13.65□□□□□ -0.22
SKA2-204ENST00000578519 C16orf71Q8IYS4 520 aaPredicted RBP13.65□□□□□ -0.22
SKA2-204ENST00000578519 COL15A1P39059 1388 aa13.64□□□□□ -0.23
SKA2-204ENST00000578519 HSCBQ8IWL3 235 aa13.64□□□□□ -0.23
SKA2-204ENST00000578519 PTCD1O75127 700 aaKnown RBP13.63□□□□□ -0.23
SKA2-204ENST00000578519 MCCP23508 829 aa13.63□□□□□ -0.23
SKA2-204ENST00000578519 DDB1Q16531 1140 aa13.63□□□□□ -0.23
SKA2-204ENST00000578519 CWF19L2Q2TBE0 894 aaKnown RBP13.63□□□□□ -0.23
SKA2-204ENST00000578519 RTL5Q5HYW3 569 aaPredicted RBP13.63□□□□□ -0.23
SKA2-204ENST00000578519 KIF6Q6ZMV9 814 aa13.63□□□□□ -0.23
SKA2-204ENST00000578519 BCL11AQ9H165 835 aa13.63□□□□□ -0.23
SKA2-204ENST00000578519 DISP2A7MBM2 1401 aa13.63□□□□□ -0.23
SKA2-204ENST00000578519 TTC41PQ6P2S7 1318 aa13.63□□□□□ -0.23
SKA2-204ENST00000578519 UBAP1LF5GYI3 381 aa13.62□□□□□ -0.23
SKA2-204ENST00000578519 EPB41L2O43491 1005 aaKnown RBP13.62□□□□□ -0.23
SKA2-204ENST00000578519 ADAMTS2O95450 1211 aa13.62□□□□□ -0.23
SKA2-204ENST00000578519 IFIT2P09913 472 aaKnown RBP13.62□□□□□ -0.23
SKA2-204ENST00000578519 GSPT1P15170 499 aaKnown RBP13.62□□□□□ -0.23
SKA2-204ENST00000578519 SDSP20132 328 aa13.62□□□□□ -0.23
SKA2-204ENST00000578519 PIP4K2BP78356 416 aa13.62□□□□□ -0.23
SKA2-204ENST00000578519 HSP90AB3PQ58FF7 597 aa13.62□□□□□ -0.23
SKA2-204ENST00000578519 CCDC191Q8NCU4 936 aa13.62□□□□□ -0.23
SKA2-204ENST00000578519 TNS2Q63HR2 1409 aa13.62□□□□□ -0.23
SKA2-204ENST00000578519 PHLPP1O60346 1717 aa13.61□□□□□ -0.23
SKA2-204ENST00000578519 TRIM6-TRIM34B2RNG4 842 aa13.61□□□□□ -0.23
SKA2-204ENST00000578519 ABCB7O75027 752 aa13.61□□□□□ -0.23
SKA2-204ENST00000578519 GLRX3O76003 335 aaKnown RBP13.61□□□□□ -0.23
SKA2-204ENST00000578519 IGKV5-2P06315 115 aa13.61□□□□□ -0.23
SKA2-204ENST00000578519 BARGINQ6ZT62 677 aa13.61□□□□□ -0.23
SKA2-204ENST00000578519 LRP10Q7Z4F1 713 aa13.61□□□□□ -0.23
SKA2-204ENST00000578519 CNTROBQ8N137 903 aa13.61□□□□□ -0.23
SKA2-204ENST00000578519 PIGBQ92521 554 aa13.61□□□□□ -0.23
SKA2-204ENST00000578519 SUCLG2Q96I99 432 aa13.61□□□□□ -0.23
SKA2-204ENST00000578519 CWC25Q9NXE8 425 aaPredicted RBP13.61□□□□□ -0.23
SKA2-204ENST00000578519 CCDC9Q9Y3X0 531 aaKnown RBP13.61□□□□□ -0.23
SKA2-204ENST00000578519 SPATA31A1Q5TZJ5 1347 aa13.61□□□□□ -0.23
SKA2-204ENST00000578519 A0A087WZG4 1122 aa13.6□□□□□ -0.23
SKA2-204ENST00000578519 NUTM2BA6NNL0 878 aaPredicted RBP13.6□□□□□ -0.23
SKA2-204ENST00000578519 NUTM2EB1AL46 878 aaPredicted RBP13.6□□□□□ -0.23
SKA2-204ENST00000578519 NUTM2AQ8IVF1 878 aaPredicted RBP13.6□□□□□ -0.23
SKA2-204ENST00000578519 SNX21Q969T3 373 aa13.6□□□□□ -0.23
SKA2-204ENST00000578519 LAMB4A4D0S4 1761 aa13.59□□□□□ -0.23
SKA2-204ENST00000578519 A1BGP04217 495 aa13.59□□□□□ -0.23
SKA2-204ENST00000578519 RUFY2Q8WXA3 655 aa13.59□□□□□ -0.23
SKA2-204ENST00000578519 SMARCC1Q92922 1105 aaPredicted RBP13.59□□□□□ -0.23
SKA2-204ENST00000578519 RILPL2Q969X0 211 aa13.59□□□□□ -0.23
SKA2-204ENST00000578519 BICC1Q9H694 974 aaKnown RBP13.59□□□□□ -0.23
SKA2-204ENST00000578519 ATG3Q9NT62 314 aa13.59□□□□□ -0.23
SKA2-204ENST00000578519 LRP6O75581 1613 aa13.59□□□□□ -0.23
SKA2-204ENST00000578519 SALL3Q9BXA9 1300 aa13.59□□□□□ -0.23
SKA2-204ENST00000578519 JCADQ9P266 1359 aa13.58□□□□□ -0.23
SKA2-204ENST00000578519 HIP1O00291 1037 aa13.58□□□□□ -0.24
SKA2-204ENST00000578519 TRIM28Q13263 835 aaKnown RBP13.58□□□□□ -0.24
SKA2-204ENST00000578519 RABEP1Q15276 862 aa13.58□□□□□ -0.24
SKA2-204ENST00000578519 OTUD7AQ8TE49 926 aaPredicted RBP13.58□□□□□ -0.24
SKA2-204ENST00000578519 IL1RAPL2Q9NP60 686 aa13.58□□□□□ -0.24
SKA2-204ENST00000578519 KCPQ6ZWJ8 1503 aa13.58□□□□□ -0.24
SKA2-204ENST00000578519 SPATA31A5Q5VU36 1347 aa13.58□□□□□ -0.24
SKA2-204ENST00000578519 SPATA31A7Q8IWB4 1347 aa13.58□□□□□ -0.24
SKA2-204ENST00000578519 USP42Q9H9J4 1324 aaKnown RBP13.58□□□□□ -0.24
SKA2-204ENST00000578519 PLCH1Q4KWH8 1693 aa13.57□□□□□ -0.24
SKA2-204ENST00000578519 NBPF26B4DH59 902 aa13.57□□□□□ -0.24
SKA2-204ENST00000578519 H7C1W4 665 aa13.57□□□□□ -0.24
SKA2-204ENST00000578519 NBPF14Q5TI25 921 aa13.57□□□□□ -0.24
SKA2-204ENST00000578519 NBPF10Q6P3W6 841 aaKnown RBP13.57□□□□□ -0.24
SKA2-204ENST00000578519 UNC5CLQ8IV45 518 aa13.57□□□□□ -0.24
SKA2-204ENST00000578519 NBPF15Q8N660 670 aa13.57□□□□□ -0.24
SKA2-204ENST00000578519 SYTL4Q96C24 671 aaPredicted RBP13.57□□□□□ -0.24
SKA2-204ENST00000578519 COPRSQ9NQ92 184 aa13.57□□□□□ -0.24
SKA2-204ENST00000578519 ECHDC1Q9NTX5 307 aa13.57□□□□□ -0.24
SKA2-204ENST00000578519 COL16A1Q07092 1604 aaPredicted RBP13.57□□□□□ -0.24
SKA2-204ENST00000578519 C5P01031 1676 aa13.56□□□□□ -0.24
SKA2-204ENST00000578519 BCL9O00512 1426 aa13.56□□□□□ -0.24
SKA2-204ENST00000578519 HSP90B1P14625 803 aaKnown RBP13.56□□□□□ -0.24
SKA2-204ENST00000578519 TCIRG1Q13488 830 aa13.56□□□□□ -0.24
SKA2-204ENST00000578519 RABL6Q3YEC7 729 aaPredicted RBP13.56□□□□□ -0.24
SKA2-204ENST00000578519 UBE3BQ7Z3V4 1068 aa13.56□□□□□ -0.24
SKA2-204ENST00000578519 NGLY1Q96IV0 654 aa13.56□□□□□ -0.24
SKA2-204ENST00000578519 ASAP1Q9ULH1 1129 aa13.56□□□□□ -0.24
SKA2-204ENST00000578519 SPATA31A6Q5VVP1 1343 aa13.56□□□□□ -0.24
SKA2-204ENST00000578519 PAPPAQ13219 1627 aa13.55□□□□□ -0.24
SKA2-204ENST00000578519 NUTM1Q86Y26 1132 aa13.55□□□□□ -0.24
SKA2-204ENST00000578519 DNAJC10Q8IXB1 793 aa13.55□□□□□ -0.24
SKA2-204ENST00000578519 USP26Q9BXU7 913 aa13.55□□□□□ -0.24
SKA2-204ENST00000578519 TBC1D2Q9BYX2 928 aa13.55□□□□□ -0.24
SKA2-204ENST00000578519 FBXO3Q9UK99 471 aa13.55□□□□□ -0.24
SKA2-204ENST00000578519 UBR2Q8IWV8 1755 aa13.55□□□□□ -0.24
SKA2-204ENST00000578519 ERVV-1B6SEH8 477 aa13.54□□□□□ -0.24
SKA2-204ENST00000578519 ATP5J2-PTCD1G3V325 749 aa13.54□□□□□ -0.24
SKA2-204ENST00000578519 ST18O60284 1047 aa13.54□□□□□ -0.24
SKA2-204ENST00000578519 IL6STP40189 918 aaPredicted RBP13.54□□□□□ -0.24
SKA2-204ENST00000578519 PRIM1P49642 420 aaKnown RBP13.54□□□□□ -0.24
SKA2-204ENST00000578519 VPS72Q15906 364 aa13.54□□□□□ -0.24
SKA2-204ENST00000578519 TTLL7Q6ZT98 887 aa13.54□□□□□ -0.24
SKA2-204ENST00000578519 KIAA1211Q6ZU35 1233 aa13.54□□□□□ -0.24
SKA2-204ENST00000578519 AACSQ86V21 672 aa13.54□□□□□ -0.24
SKA2-204ENST00000578519 TICAM2Q86XR7 235 aa13.54□□□□□ -0.24
SKA2-204ENST00000578519 ESYT1Q9BSJ8 1104 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 163.3 ms