RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 ARFGEF2Q9Y6D5 1785 aa28.09■■■□□ 2.09
CDC42EP4-203ENST00000578516 HNRNPUQ00839 825 aaKnown RBP eCLIP28.09■■■□□ 2.09
CDC42EP4-203ENST00000578516 HLFQ16534 295 aa28.09■■■□□ 2.09
CDC42EP4-203ENST00000578516 NPM2Q86SE8 214 aaKnown RBP28.09■■■□□ 2.09
CDC42EP4-203ENST00000578516 ZBTB3Q9H5J0 574 aa28.09■■■□□ 2.09
CDC42EP4-203ENST00000578516 TWISTNBQ3B726 338 aaPredicted RBP28.08■■■□□ 2.09
CDC42EP4-203ENST00000578516 ANKRD31Q8N7Z5 1873 aa28.07■■■□□ 2.08
CDC42EP4-203ENST00000578516 GOLGA2Q08379 1002 aa28.07■■■□□ 2.08
CDC42EP4-203ENST00000578516 AIMP1Q12904 312 aaKnown RBP28.07■■■□□ 2.08
CDC42EP4-203ENST00000578516 XAGE3Q8WTP9 111 aa28.07■■■□□ 2.08
CDC42EP4-203ENST00000578516 DDX21Q9NR30 783 aaKnown RBP eCLIP28.07■■■□□ 2.08
CDC42EP4-203ENST00000578516 POLRMTO00411 1230 aaKnown RBP28.06■■■□□ 2.08
CDC42EP4-203ENST00000578516 TM4SF1P30408 202 aa28.06■■■□□ 2.08
CDC42EP4-203ENST00000578516 NLGN2Q8NFZ4 835 aa28.06■■■□□ 2.08
CDC42EP4-203ENST00000578516 MYH16Q9H6N6 1097 aa28.05■■■□□ 2.08
CDC42EP4-203ENST00000578516 C10orf71Q711Q0 1435 aa28.04■■■□□ 2.08
CDC42EP4-203ENST00000578516 CARMIL3Q8ND23 1372 aa28.04■■■□□ 2.08
CDC42EP4-203ENST00000578516 MAP3K15Q6ZN16 1313 aa28.04■■■□□ 2.08
CDC42EP4-203ENST00000578516 SLFN5Q08AF3 891 aa28.04■■■□□ 2.08
CDC42EP4-203ENST00000578516 COPS6Q7L5N1 327 aa28.04■■■□□ 2.08
CDC42EP4-203ENST00000578516 PARP3Q9Y6F1 533 aa28.04■■■□□ 2.08
CDC42EP4-203ENST00000578516 KIF6Q6ZMV9 814 aa28.03■■■□□ 2.08
CDC42EP4-203ENST00000578516 SYT17Q9BSW7 474 aa28.03■■■□□ 2.08
CDC42EP4-203ENST00000578516 PHAXQ9H814 394 aaKnown RBP28.03■■■□□ 2.08
CDC42EP4-203ENST00000578516 CCDC24Q8N4L8 307 aa28.02■■■□□ 2.08
CDC42EP4-203ENST00000578516 DBF4Q9UBU7 674 aaPredicted RBP28.02■■■□□ 2.08
CDC42EP4-203ENST00000578516 VAMP4O75379 141 aa28.01■■■□□ 2.07
CDC42EP4-203ENST00000578516 E9PSI1 815 aa28■■■□□ 2.07
CDC42EP4-203ENST00000578516 ZNF428Q96B54 188 aa28■■■□□ 2.07
CDC42EP4-203ENST00000578516 WWC3Q9ULE0 1092 aa28■■■□□ 2.07
CDC42EP4-203ENST00000578516 CACNA1FO60840 1977 aa28■■■□□ 2.07
CDC42EP4-203ENST00000578516 COL11A2P13942 1736 aaPredicted RBP28■■■□□ 2.07
CDC42EP4-203ENST00000578516 FAM177BA6PVY3 158 aa27.99■■■□□ 2.07
CDC42EP4-203ENST00000578516 GPTP24298 496 aa27.99■■■□□ 2.07
CDC42EP4-203ENST00000578516 SERPINB2P05120 415 aa27.98■■■□□ 2.07
CDC42EP4-203ENST00000578516 CCDC30Q5VVM6 783 aa27.98■■■□□ 2.07
CDC42EP4-203ENST00000578516 G2E3Q7L622 706 aa27.98■■■□□ 2.07
CDC42EP4-203ENST00000578516 TNRC6CQ9HCJ0 1690 aaKnown RBP27.97■■■□□ 2.07
CDC42EP4-203ENST00000578516 NIP7Q9Y221 180 aaKnown RBP eCLIP27.97■■■□□ 2.07
CDC42EP4-203ENST00000578516 BRCA1P38398 1863 aaKnown RBP27.97■■■□□ 2.07
CDC42EP4-203ENST00000578516 PXDNLA1KZ92 1463 aa27.96■■■□□ 2.07
CDC42EP4-203ENST00000578516 UBN2Q6ZU65 1347 aa27.96■■■□□ 2.07
CDC42EP4-203ENST00000578516 ATP10DQ9P241 1426 aa27.96■■■□□ 2.07
CDC42EP4-203ENST00000578516 ZNF652Q9Y2D9 606 aa27.96■■■□□ 2.07
CDC42EP4-203ENST00000578516 ERVV-1B6SEH8 477 aa27.95■■■□□ 2.06
CDC42EP4-203ENST00000578516 TRMT2AQ8IZ69 625 aaKnown RBP27.95■■■□□ 2.06
CDC42EP4-203ENST00000578516 HYPKQ9NX55 129 aa27.95■■■□□ 2.06
CDC42EP4-203ENST00000578516 CACNA1SQ13698 1873 aa27.95■■■□□ 2.06
CDC42EP4-203ENST00000578516 SETDB2Q96T68 719 aa27.94■■■□□ 2.06
CDC42EP4-203ENST00000578516 DLEC1Q9Y238 1755 aa27.94■■■□□ 2.06
CDC42EP4-203ENST00000578516 CLEC4GQ6UXB4 293 aa27.93■■■□□ 2.06
CDC42EP4-203ENST00000578516 GIGYF2Q6Y7W6 1299 aaKnown RBP27.93■■■□□ 2.06
CDC42EP4-203ENST00000578516 PRR5LQ6MZQ0 368 aa27.92■■■□□ 2.06
CDC42EP4-203ENST00000578516 STK31Q9BXU1 1019 aa27.92■■■□□ 2.06
CDC42EP4-203ENST00000578516 CD2APQ9Y5K6 639 aa27.91■■■□□ 2.06
CDC42EP4-203ENST00000578516 ABCC12Q96J65 1359 aa27.9■■■□□ 2.06
CDC42EP4-203ENST00000578516 SLC4A2P04920 1241 aa27.9■■■□□ 2.06
CDC42EP4-203ENST00000578516 PLBD2Q8NHP8 589 aa27.9■■■□□ 2.06
CDC42EP4-203ENST00000578516 ADCY9O60503 1353 aa27.89■■■□□ 2.06
CDC42EP4-203ENST00000578516 ZNF34Q8IZ26 560 aa27.89■■■□□ 2.06
CDC42EP4-203ENST00000578516 ZBED9Q6R2W3 1325 aa27.89■■■□□ 2.05
CDC42EP4-203ENST00000578516 LAMB2P55268 1798 aa27.88■■■□□ 2.05
CDC42EP4-203ENST00000578516 A0A0G2JLW4 131 aa27.88■■■□□ 2.05
CDC42EP4-203ENST00000578516 CHRNA5P30532 468 aa27.88■■■□□ 2.05
CDC42EP4-203ENST00000578516 SUSD4Q5VX71 490 aa27.88■■■□□ 2.05
CDC42EP4-203ENST00000578516 ANKRD13DQ6ZTN6 518 aa27.88■■■□□ 2.05
CDC42EP4-203ENST00000578516 NBPF5PQ86XG9 351 aaPredicted RBP27.88■■■□□ 2.05
CDC42EP4-203ENST00000578516 CNBD1Q8NA66 436 aa27.88■■■□□ 2.05
CDC42EP4-203ENST00000578516 BCL2L13Q9BXK5 485 aa27.88■■■□□ 2.05
CDC42EP4-203ENST00000578516 ATP5J2-PTCD1G3V325 749 aa27.87■■■□□ 2.05
CDC42EP4-203ENST00000578516 DPEP1P16444 411 aa27.87■■■□□ 2.05
CDC42EP4-203ENST00000578516 NUTM1Q86Y26 1132 aa27.87■■■□□ 2.05
CDC42EP4-203ENST00000578516 RGL2O15211 777 aa27.86■■■□□ 2.05
CDC42EP4-203ENST00000578516 PELP1Q8IZL8 1130 aaKnown RBP27.86■■■□□ 2.05
CDC42EP4-203ENST00000578516 DDX60Q8IY21 1712 aaKnown RBP27.85■■■□□ 2.05
CDC42EP4-203ENST00000578516 RIC3Q7Z5B4 369 aa27.85■■■□□ 2.05
CDC42EP4-203ENST00000578516 NPHP1O15259 732 aa27.84■■■□□ 2.05
CDC42EP4-203ENST00000578516 FLIIQ13045 1269 aa27.84■■■□□ 2.05
CDC42EP4-203ENST00000578516 TCIRG1Q13488 830 aa27.84■■■□□ 2.05
CDC42EP4-203ENST00000578516 NTSR2O95665 410 aa27.83■■■□□ 2.05
CDC42EP4-203ENST00000578516 NLRP10Q86W26 655 aa27.83■■■□□ 2.05
CDC42EP4-203ENST00000578516 SYNE4Q8N205 404 aa27.83■■■□□ 2.05
CDC42EP4-203ENST00000578516 MYD88Q99836 296 aa27.83■■■□□ 2.05
CDC42EP4-203ENST00000578516 MAP3K2Q9Y2U5 619 aa27.83■■■□□ 2.05
CDC42EP4-203ENST00000578516 PI4KAP2A4QPH2 592 aa27.82■■■□□ 2.04
CDC42EP4-203ENST00000578516 YBX3P16989 372 aaKnown RBP eCLIP27.82■■■□□ 2.04
CDC42EP4-203ENST00000578516 ERFEQ4G0M1 354 aa27.82■■■□□ 2.04
CDC42EP4-203ENST00000578516 PI4KAP1Q8N8J0 262 aa27.82■■■□□ 2.04
CDC42EP4-203ENST00000578516 SSH1Q8WYL5 1049 aa27.82■■■□□ 2.04
CDC42EP4-203ENST00000578516 KCNA3P22001 575 aa27.81■■■□□ 2.04
CDC42EP4-203ENST00000578516 ISCA1Q9BUE6 129 aa27.81■■■□□ 2.04
CDC42EP4-203ENST00000578516 FKBP5Q13451 457 aaPredicted RBP27.8■■■□□ 2.04
CDC42EP4-203ENST00000578516 MRPL50Q8N5N7 158 aaKnown RBP27.8■■■□□ 2.04
CDC42EP4-203ENST00000578516 ARFGEF1Q9Y6D6 1849 aa27.79■■■□□ 2.04
CDC42EP4-203ENST00000578516 IBTKQ9P2D0 1353 aaPredicted RBP27.79■■■□□ 2.04
CDC42EP4-203ENST00000578516 F6X3S4 739 aa27.79■■■□□ 2.04
CDC42EP4-203ENST00000578516 ST5P78524 1137 aa27.79■■■□□ 2.04
CDC42EP4-203ENST00000578516 HSP90AB3PQ58FF7 597 aa27.79■■■□□ 2.04
CDC42EP4-203ENST00000578516 CHMP4AQ9BY43 222 aa27.79■■■□□ 2.04
CDC42EP4-203ENST00000578516 DDX58O95786 925 aaKnown RBP27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms