RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 SUSD3Q96L08 255 aa4.09□□□□□ -1.75
PTP4A1-204ENST00000578299 SAP130Q9H0E3 1048 aa4.09□□□□□ -1.75
PTP4A1-204ENST00000578299 NUCKS1Q9H1E3 243 aaKnown RBP4.09□□□□□ -1.75
PTP4A1-204ENST00000578299 SEPT3Q9UH03 358 aa4.09□□□□□ -1.75
PTP4A1-204ENST00000578299 EGFL7Q9UHF1 273 aa4.09□□□□□ -1.75
PTP4A1-204ENST00000578299 GJA3Q9Y6H8 435 aa4.09□□□□□ -1.75
PTP4A1-204ENST00000578299 H3BM21 787 aa4.08□□□□□ -1.76
PTP4A1-204ENST00000578299 TGFBR3LH3BV60 316 aa4.08□□□□□ -1.76
PTP4A1-204ENST00000578299 BRD2P25440 801 aaKnown RBP4.08□□□□□ -1.76
PTP4A1-204ENST00000578299 SF3B2Q13435 895 aaKnown RBP4.08□□□□□ -1.76
PTP4A1-204ENST00000578299 DGKZQ13574 1117 aa4.08□□□□□ -1.76
PTP4A1-204ENST00000578299 DBN1Q16643 649 aa4.08□□□□□ -1.76
PTP4A1-204ENST00000578299 SAMD5Q5TGI4 173 aa4.08□□□□□ -1.76
PTP4A1-204ENST00000578299 IER5Q5VY09 327 aa4.08□□□□□ -1.76
PTP4A1-204ENST00000578299 FOXR1Q6PIV2 292 aa4.08□□□□□ -1.76
PTP4A1-204ENST00000578299 LRRC69Q6ZNQ3 347 aa4.08□□□□□ -1.76
PTP4A1-204ENST00000578299 SLC16A10Q8TF71 515 aa4.08□□□□□ -1.76
PTP4A1-204ENST00000578299 NANOS1Q8WY41 292 aaKnown RBP4.08□□□□□ -1.76
PTP4A1-204ENST00000578299 CUEDC1Q9NWM3 386 aaPredicted RBP4.08□□□□□ -1.76
PTP4A1-204ENST00000578299 KLK14Q9P0G3 267 aa4.08□□□□□ -1.76
PTP4A1-204ENST00000578299 STIM2Q9P246 746 aa4.08□□□□□ -1.76
PTP4A1-204ENST00000578299 LRFN2Q9ULH4 789 aa4.08□□□□□ -1.76
PTP4A1-204ENST00000578299 CDC14CA4D256 554 aa4.07□□□□□ -1.76
PTP4A1-204ENST00000578299 TERTO14746 1132 aaKnown RBP4.07□□□□□ -1.76
PTP4A1-204ENST00000578299 TNFRSF10BO14763 440 aa4.07□□□□□ -1.76
PTP4A1-204ENST00000578299 ABL1P00519 1130 aa4.07□□□□□ -1.76
PTP4A1-204ENST00000578299 SERPINB4P48594 390 aa4.07□□□□□ -1.76
PTP4A1-204ENST00000578299 SV2AQ7L0J3 742 aa4.07□□□□□ -1.76
PTP4A1-204ENST00000578299 VWA5B2Q8N398 1253 aa4.07□□□□□ -1.76
PTP4A1-204ENST00000578299 ABTB2Q8N961 1025 aa4.07□□□□□ -1.76
PTP4A1-204ENST00000578299 GTPBP3Q969Y2 492 aaKnown RBP4.07□□□□□ -1.76
PTP4A1-204ENST00000578299 ZNF837Q96EG3 531 aaPredicted RBP4.07□□□□□ -1.76
PTP4A1-204ENST00000578299 IFT43Q96FT9 208 aa4.07□□□□□ -1.76
PTP4A1-204ENST00000578299 HSH2DQ96JZ2 352 aa4.07□□□□□ -1.76
PTP4A1-204ENST00000578299 PCDHGC4Q9Y5F7 938 aa4.07□□□□□ -1.76
PTP4A1-204ENST00000578299 DNMT3AQ9Y6K1 912 aaPredicted RBP4.07□□□□□ -1.76
PTP4A1-204ENST00000578299 ATXN7O15265 892 aaPredicted RBP4.06□□□□□ -1.76
PTP4A1-204ENST00000578299 ICMTO60725 284 aa4.06□□□□□ -1.76
PTP4A1-204ENST00000578299 FAM13AO94988 1023 aa4.06□□□□□ -1.76
PTP4A1-204ENST00000578299 THBS1P07996 1170 aa4.06□□□□□ -1.76
PTP4A1-204ENST00000578299 FAM157BP0CG42 384 aa4.06□□□□□ -1.76
PTP4A1-204ENST00000578299 VSIG8P0DPA2 414 aa4.06□□□□□ -1.76
PTP4A1-204ENST00000578299 NPR3P17342 541 aa4.06□□□□□ -1.76
PTP4A1-204ENST00000578299 VEGFBP49765 207 aa4.06□□□□□ -1.76
PTP4A1-204ENST00000578299 FKBP4Q02790 459 aaKnown RBP eCLIP4.06□□□□□ -1.762e-8■■■□□ 16.5
PTP4A1-204ENST00000578299 ZNF211Q13398 564 aaPredicted RBP4.06□□□□□ -1.76
PTP4A1-204ENST00000578299 UBAP2LQ14157 1087 aaKnown RBP4.06□□□□□ -1.76
PTP4A1-204ENST00000578299 BTLAQ7Z6A9 289 aa4.06□□□□□ -1.76
PTP4A1-204ENST00000578299 ZNF280CQ8ND82 737 aa4.06□□□□□ -1.76
PTP4A1-204ENST00000578299 TRERF1Q96PN7 1200 aa4.06□□□□□ -1.76
PTP4A1-204ENST00000578299 CFHR5Q9BXR6 569 aa4.06□□□□□ -1.76
PTP4A1-204ENST00000578299 ZCCHC2Q9C0B9 1178 aaKnown RBP4.06□□□□□ -1.76
PTP4A1-204ENST00000578299 DMGDHQ9UI17 866 aaKnown RBP4.06□□□□□ -1.76
PTP4A1-204ENST00000578299 PHF24Q9UPV7 400 aa4.06□□□□□ -1.76
PTP4A1-204ENST00000578299 BCS1LQ9Y276 419 aa4.06□□□□□ -1.76
PTP4A1-204ENST00000578299 IVNS1ABPQ9Y6Y0 642 aa4.06□□□□□ -1.76
PTP4A1-204ENST00000578299 ZBTB7CA1YPR0 619 aa4.05□□□□□ -1.76
PTP4A1-204ENST00000578299 SOWAHDA6NJG2 315 aa4.05□□□□□ -1.76
PTP4A1-204ENST00000578299 MICAL2O94851 1124 aa4.05□□□□□ -1.76
PTP4A1-204ENST00000578299 MPSTP25325 297 aa4.05□□□□□ -1.76
PTP4A1-204ENST00000578299 TYRO3Q06418 890 aa4.05□□□□□ -1.76
PTP4A1-204ENST00000578299 MTMR3Q13615 1198 aa4.05□□□□□ -1.76
PTP4A1-204ENST00000578299 LAMC2Q13753 1193 aa4.05□□□□□ -1.76
PTP4A1-204ENST00000578299 NOM1Q5C9Z4 860 aaKnown RBP4.05□□□□□ -1.76
PTP4A1-204ENST00000578299 ALKBH2Q6NS38 261 aa4.05□□□□□ -1.76
PTP4A1-204ENST00000578299 TREML1Q86YW5 311 aa4.05□□□□□ -1.76
PTP4A1-204ENST00000578299 GLYCTKQ8IVS8 523 aa4.05□□□□□ -1.76
PTP4A1-204ENST00000578299 ETFBKMTQ8IXQ9 262 aa4.05□□□□□ -1.76
PTP4A1-204ENST00000578299 IRF7Q92985 503 aa4.05□□□□□ -1.76
PTP4A1-204ENST00000578299 KLRG1Q96E93 195 aa4.05□□□□□ -1.76
PTP4A1-204ENST00000578299 CEP63Q96MT8 703 aa4.05□□□□□ -1.76
PTP4A1-204ENST00000578299 ANO2Q9NQ90 1003 aa4.05□□□□□ -1.76
PTP4A1-204ENST00000578299 NDFIP2Q9NV92 336 aa4.05□□□□□ -1.76
PTP4A1-204ENST00000578299 FAM13BQ9NYF5 915 aa4.05□□□□□ -1.76
PTP4A1-204ENST00000578299 ATXN7L1Q9ULK2 861 aaPredicted RBP4.05□□□□□ -1.76
PTP4A1-204ENST00000578299 H3BRB1 525 aa4.04□□□□□ -1.76
PTP4A1-204ENST00000578299 KHNYNO15037 678 aaKnown RBP4.04□□□□□ -1.76
PTP4A1-204ENST00000578299 EFSO43281 561 aa4.04□□□□□ -1.76
PTP4A1-204ENST00000578299 BNIP3LO60238 219 aa4.04□□□□□ -1.76
PTP4A1-204ENST00000578299 MAPTP10636 758 aaKnown RBP4.04□□□□□ -1.76
PTP4A1-204ENST00000578299 EPB42P16452 691 aa4.04□□□□□ -1.76
PTP4A1-204ENST00000578299 INPP5BP32019 993 aa4.04□□□□□ -1.76
PTP4A1-204ENST00000578299 IDH3AP50213 366 aa4.04□□□□□ -1.76
PTP4A1-204ENST00000578299 ARSDP51689 593 aa4.04□□□□□ -1.76
PTP4A1-204ENST00000578299 KCNQ4P56696 695 aa4.04□□□□□ -1.76
PTP4A1-204ENST00000578299 TNP2Q05952 138 aa4.04□□□□□ -1.76
PTP4A1-204ENST00000578299 NFX1Q12986 1120 aaKnown RBP4.04□□□□□ -1.76
PTP4A1-204ENST00000578299 TUT1Q9H6E5 874 aaKnown RBP4.04□□□□□ -1.76
PTP4A1-204ENST00000578299 BRD7Q9NPI1 651 aa4.04□□□□□ -1.76
PTP4A1-204ENST00000578299 ERBB4Q15303 1308 aa4.03□□□□□ -1.76
PTP4A1-204ENST00000578299 DCDC2BA2VCK2 349 aa4.03□□□□□ -1.76
PTP4A1-204ENST00000578299 GPR25O00155 361 aa4.03□□□□□ -1.76
PTP4A1-204ENST00000578299 OPLAHO14841 1288 aa4.03□□□□□ -1.76
PTP4A1-204ENST00000578299 ZBTB39O15060 712 aa4.03□□□□□ -1.76
PTP4A1-204ENST00000578299 ZAP70P43403 619 aa4.03□□□□□ -1.76
PTP4A1-204ENST00000578299 EIF1AXP47813 144 aaKnown RBP4.03□□□□□ -1.76
PTP4A1-204ENST00000578299 FAM26DQ5JW98 314 aa4.03□□□□□ -1.76
PTP4A1-204ENST00000578299 FAM182BQ5T319 152 aa4.03□□□□□ -1.76
PTP4A1-204ENST00000578299 ZNF775Q96BV0 537 aaPredicted RBP4.03□□□□□ -1.76
PTP4A1-204ENST00000578299 ABHD17AQ96GS6 310 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms