RNA–Protein interactions for RNA: ENST00000577939.1

SUPT6H-204, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 3

Gene SUPT6H, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-204ENST00000577939 CHRNA5P30532 468 aa13.3□□□□□ -0.28
SUPT6H-204ENST00000577939 CALD1Q05682 793 aaKnown RBP13.3□□□□□ -0.28
SUPT6H-204ENST00000577939 CCDC146Q8IYE0 955 aa13.3□□□□□ -0.28
SUPT6H-204ENST00000577939 TTLL6Q8N841 843 aa13.3□□□□□ -0.28
SUPT6H-204ENST00000577939 BRIP1Q9BX63 1249 aa13.3□□□□□ -0.28
SUPT6H-204ENST00000577939 MIS18AQ9NYP9 233 aa13.3□□□□□ -0.28
SUPT6H-204ENST00000577939 PRR5LQ6MZQ0 368 aa13.29□□□□□ -0.28
SUPT6H-204ENST00000577939 ZC3H4Q9UPT8 1303 aaKnown RBP13.29□□□□□ -0.28
SUPT6H-204ENST00000577939 IBTKQ9P2D0 1353 aaPredicted RBP13.29□□□□□ -0.28
SUPT6H-204ENST00000577939 KCNA3P22001 575 aa13.28□□□□□ -0.28
SUPT6H-204ENST00000577939 PIP4K2AP48426 406 aaPredicted RBP13.28□□□□□ -0.28
SUPT6H-204ENST00000577939 NEUROD2Q15784 382 aa13.28□□□□□ -0.28
SUPT6H-204ENST00000577939 SOGA3Q5TF21 947 aa13.28□□□□□ -0.28
SUPT6H-204ENST00000577939 NYXQ9GZU5 481 aa13.28□□□□□ -0.28
SUPT6H-204ENST00000577939 NIP7Q9Y221 180 aaKnown RBP eCLIP13.28□□□□□ -0.28
SUPT6H-204ENST00000577939 ERVV-1B6SEH8 477 aa13.27□□□□□ -0.29
SUPT6H-204ENST00000577939 GTF2E1P29083 439 aaPredicted RBP13.27□□□□□ -0.29
SUPT6H-204ENST00000577939 C1QTNF8P60827 252 aa13.27□□□□□ -0.29
SUPT6H-204ENST00000577939 TPTE2Q6XPS3 522 aa13.27□□□□□ -0.29
SUPT6H-204ENST00000577939 RRP7AQ9Y3A4 280 aaKnown RBP13.27□□□□□ -0.29
SUPT6H-204ENST00000577939 MAP3K15Q6ZN16 1313 aa13.27□□□□□ -0.29
SUPT6H-204ENST00000577939 SLX4Q8IY92 1834 aa13.27□□□□□ -0.29
SUPT6H-204ENST00000577939 NBPF26B4DH59 902 aa13.26□□□□□ -0.29
SUPT6H-204ENST00000577939 RIC1Q4ADV7 1423 aa13.26□□□□□ -0.29
SUPT6H-204ENST00000577939 NBPF10Q6P3W6 841 aaKnown RBP13.26□□□□□ -0.29
SUPT6H-204ENST00000577939 NBPF15Q8N660 670 aa13.26□□□□□ -0.29
SUPT6H-204ENST00000577939 KDM2BQ8NHM5 1336 aa13.26□□□□□ -0.29
SUPT6H-204ENST00000577939 ZNF526Q8TF50 670 aaPredicted RBP13.26□□□□□ -0.29
SUPT6H-204ENST00000577939 CNKSR1Q969H4 720 aa13.26□□□□□ -0.29
SUPT6H-204ENST00000577939 ZNF622Q969S3 477 aaKnown RBP eCLIP13.26□□□□□ -0.295e-8■■■□□ 14.7
SUPT6H-204ENST00000577939 RNF181Q9P0P0 153 aa13.26□□□□□ -0.29
SUPT6H-204ENST00000577939 ADAMTS8Q9UP79 889 aa13.26□□□□□ -0.29
SUPT6H-204ENST00000577939 CACNA1FO60840 1977 aa13.25□□□□□ -0.29
SUPT6H-204ENST00000577939 ZNF316A6NFI3 1004 aaPredicted RBP13.25□□□□□ -0.29
SUPT6H-204ENST00000577939 ANP32CO43423 234 aa13.25□□□□□ -0.29
SUPT6H-204ENST00000577939 HOXB7P09629 217 aa13.25□□□□□ -0.29
SUPT6H-204ENST00000577939 MYL6BP14649 208 aa13.25□□□□□ -0.29
SUPT6H-204ENST00000577939 C9orf131Q5VYM1 1079 aa13.25□□□□□ -0.29
SUPT6H-204ENST00000577939 STYK1Q6J9G0 422 aa13.25□□□□□ -0.29
SUPT6H-204ENST00000577939 MASTLQ96GX5 879 aa13.25□□□□□ -0.29
SUPT6H-204ENST00000577939 LMNB1P20700 586 aa13.24□□□□□ -0.29
SUPT6H-204ENST00000577939 NGEFQ8N5V2 710 aa13.24□□□□□ -0.29
SUPT6H-204ENST00000577939 CHMP4AQ9BY43 222 aa13.24□□□□□ -0.29
SUPT6H-204ENST00000577939 LAS1LQ9Y4W2 734 aaKnown RBP13.24□□□□□ -0.29
SUPT6H-204ENST00000577939 LAMB2P55268 1798 aa13.23□□□□□ -0.29
SUPT6H-204ENST00000577939 RNF123Q5XPI4 1314 aa13.23□□□□□ -0.29
SUPT6H-204ENST00000577939 EIF2S2P20042 333 aaKnown RBP13.23□□□□□ -0.29
SUPT6H-204ENST00000577939 PARP10Q53GL7 1025 aa13.23□□□□□ -0.29
SUPT6H-204ENST00000577939 HSP90AB3PQ58FF7 597 aa13.23□□□□□ -0.29
SUPT6H-204ENST00000577939 SENP3-EIF4A1A0A087X0R7 540 aa13.22□□□□□ -0.29
SUPT6H-204ENST00000577939 CHL1O00533 1208 aa13.22□□□□□ -0.29
SUPT6H-204ENST00000577939 NPR1P16066 1061 aa13.22□□□□□ -0.29
SUPT6H-204ENST00000577939 GNAI1P63096 354 aa13.22□□□□□ -0.29
SUPT6H-204ENST00000577939 C16orf71Q8IYS4 520 aaPredicted RBP13.22□□□□□ -0.29
SUPT6H-204ENST00000577939 CFAP44Q96MT7 982 aa13.22□□□□□ -0.29
SUPT6H-204ENST00000577939 ZBTB3Q9H5J0 574 aa13.22□□□□□ -0.29
SUPT6H-204ENST00000577939 CEP350Q5VT06 3117 aa13.21□□□□□ -0.29
SUPT6H-204ENST00000577939 SRGNP10124 158 aa13.21□□□□□ -0.29
SUPT6H-204ENST00000577939 RASSF7Q02833 373 aa13.21□□□□□ -0.29
SUPT6H-204ENST00000577939 HDGFL1Q5TGJ6 251 aa13.21□□□□□ -0.29
SUPT6H-204ENST00000577939 PRPF40BQ6NWY9 871 aaKnown RBP13.21□□□□□ -0.29
SUPT6H-204ENST00000577939 GIGYF2Q6Y7W6 1299 aaKnown RBP13.21□□□□□ -0.29
SUPT6H-204ENST00000577939 PPP1R42Q7Z4L9 355 aa13.21□□□□□ -0.29
SUPT6H-204ENST00000577939 TAOK3Q9H2K8 898 aa13.21□□□□□ -0.29
SUPT6H-204ENST00000577939 IFT57Q9NWB7 429 aa13.21□□□□□ -0.29
SUPT6H-204ENST00000577939 TRIM35Q9UPQ4 493 aa13.21□□□□□ -0.29
SUPT6H-204ENST00000577939 LTBP3Q9NS15 1303 aa13.2□□□□□ -0.3
SUPT6H-204ENST00000577939 FAM177BA6PVY3 158 aa13.2□□□□□ -0.3
SUPT6H-204ENST00000577939 APAF1O14727 1248 aa13.2□□□□□ -0.3
SUPT6H-204ENST00000577939 HLFQ16534 295 aa13.2□□□□□ -0.3
SUPT6H-204ENST00000577939 CCDC93Q567U6 631 aa13.2□□□□□ -0.3
SUPT6H-204ENST00000577939 TTLL7Q6ZT98 887 aa13.2□□□□□ -0.3
SUPT6H-204ENST00000577939 CCDC24Q8N4L8 307 aa13.2□□□□□ -0.3
SUPT6H-204ENST00000577939 RPGRQ92834 1020 aaKnown RBP13.2□□□□□ -0.3
SUPT6H-204ENST00000577939 DDX21Q9NR30 783 aaKnown RBP eCLIP13.2□□□□□ -0.3
SUPT6H-204ENST00000577939 C21orf2O43822 256 aa13.19□□□□□ -0.3
SUPT6H-204ENST00000577939 ALDH1B1P30837 517 aa13.19□□□□□ -0.3
SUPT6H-204ENST00000577939 MRS2Q9HD23 443 aa13.19□□□□□ -0.3
SUPT6H-204ENST00000577939 DBF4Q9UBU7 674 aaPredicted RBP13.19□□□□□ -0.3
SUPT6H-204ENST00000577939 WDR90Q96KV7 1748 aa13.19□□□□□ -0.3
SUPT6H-204ENST00000577939 ABCC12Q96J65 1359 aa13.19□□□□□ -0.3
SUPT6H-204ENST00000577939 GPTP24298 496 aa13.18□□□□□ -0.3
SUPT6H-204ENST00000577939 TMX4Q9H1E5 349 aaPredicted RBP13.18□□□□□ -0.3
SUPT6H-204ENST00000577939 SCN4AP35499 1836 aa13.18□□□□□ -0.3
SUPT6H-204ENST00000577939 MYH3P11055 1940 aa13.17□□□□□ -0.3
SUPT6H-204ENST00000577939 UBN2Q6ZU65 1347 aa13.17□□□□□ -0.3
SUPT6H-204ENST00000577939 DDX60Q8IY21 1712 aaKnown RBP13.17□□□□□ -0.3
SUPT6H-204ENST00000577939 KLRG2A4D1S0 409 aaPredicted RBP13.17□□□□□ -0.3
SUPT6H-204ENST00000577939 NFKBIEO00221 500 aa13.17□□□□□ -0.3
SUPT6H-204ENST00000577939 NECTIN2Q92692 538 aa13.17□□□□□ -0.3
SUPT6H-204ENST00000577939 MBIPQ9NS73 344 aa13.17□□□□□ -0.3
SUPT6H-204ENST00000577939 HYPKQ9NX55 129 aa13.17□□□□□ -0.3
SUPT6H-204ENST00000577939 ZNF219Q9P2Y4 722 aaPredicted RBP13.17□□□□□ -0.3
SUPT6H-204ENST00000577939 TOMM70O94826 608 aa13.16□□□□□ -0.3
SUPT6H-204ENST00000577939 GOLGA2Q08379 1002 aa13.16□□□□□ -0.3
SUPT6H-204ENST00000577939 GRIPAP1Q4V328 841 aa13.16□□□□□ -0.3
SUPT6H-204ENST00000577939 DUSP27Q5VZP5 1158 aa13.16□□□□□ -0.3
SUPT6H-204ENST00000577939 DPY19L2Q6NUT2 758 aa13.16□□□□□ -0.3
SUPT6H-204ENST00000577939 ZNF34Q8IZ26 560 aa13.16□□□□□ -0.3
SUPT6H-204ENST00000577939 RTKN2Q8IZC4 609 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms