RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 BCAR3O75815 825 aa12.98□□□□□ -0.33
CRLF3-202ENST00000577725 KRT24Q2M2I5 525 aa12.98□□□□□ -0.33
CRLF3-202ENST00000577725 BCL2L13Q9BXK5 485 aa12.98□□□□□ -0.33
CRLF3-202ENST00000577725 TSPYL4Q9UJ04 414 aa12.98□□□□□ -0.33
CRLF3-202ENST00000577725 SCN11AQ9UI33 1791 aa12.97□□□□□ -0.33
CRLF3-202ENST00000577725 CEMIPQ8WUJ3 1361 aa12.97□□□□□ -0.33
CRLF3-202ENST00000577725 RNF123Q5XPI4 1314 aa12.97□□□□□ -0.33
CRLF3-202ENST00000577725 ELL2O00472 640 aaPredicted RBP12.97□□□□□ -0.33
CRLF3-202ENST00000577725 TSPYL6Q8N831 410 aa12.97□□□□□ -0.33
CRLF3-202ENST00000577725 C8orf58Q8NAV2 365 aa12.97□□□□□ -0.33
CRLF3-202ENST00000577725 BEGAINQ9BUH8 593 aa12.97□□□□□ -0.33
CRLF3-202ENST00000577725 MCOLN1Q9GZU1 580 aa12.97□□□□□ -0.33
CRLF3-202ENST00000577725 C4AP0C0L4 1744 aa12.96□□□□□ -0.33
CRLF3-202ENST00000577725 ADAMTS7Q9UKP4 1686 aa12.96□□□□□ -0.33
CRLF3-202ENST00000577725 WDR33Q9C0J8 1336 aaKnown RBP12.96□□□□□ -0.33
CRLF3-202ENST00000577725 LOC102724428A0A0B4J2F2 783 aa12.96□□□□□ -0.33
CRLF3-202ENST00000577725 RASSF10A6NK89 507 aa12.96□□□□□ -0.33
CRLF3-202ENST00000577725 POTEIP0CG38 1075 aa12.96□□□□□ -0.33
CRLF3-202ENST00000577725 POTEJP0CG39 1038 aa12.96□□□□□ -0.33
CRLF3-202ENST00000577725 SIK1P57059 783 aa12.96□□□□□ -0.33
CRLF3-202ENST00000577725 DEFB115Q30KQ5 88 aa12.96□□□□□ -0.33
CRLF3-202ENST00000577725 TRAPPC3LQ5T215 181 aa12.96□□□□□ -0.33
CRLF3-202ENST00000577725 IFNL2Q8IZJ0 200 aa12.96□□□□□ -0.33
CRLF3-202ENST00000577725 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.96□□□□□ -0.33
CRLF3-202ENST00000577725 SBF1O95248 1867 aa12.95□□□□□ -0.34
CRLF3-202ENST00000577725 SIPA1L3O60292 1781 aaPredicted RBP12.95□□□□□ -0.34
CRLF3-202ENST00000577725 TCERG1O14776 1098 aaKnown RBP12.95□□□□□ -0.34
CRLF3-202ENST00000577725 KCNQ3O43525 872 aa12.95□□□□□ -0.34
CRLF3-202ENST00000577725 RARSP54136 660 aaKnown RBP12.95□□□□□ -0.34
CRLF3-202ENST00000577725 TEFQ10587 303 aa12.95□□□□□ -0.34
CRLF3-202ENST00000577725 TAF7Q15545 349 aaPredicted RBP12.95□□□□□ -0.34
CRLF3-202ENST00000577725 KDM3BQ7LBC6 1761 aa12.94□□□□□ -0.34
CRLF3-202ENST00000577725 PCDH11XQ9BZA7 1347 aa12.94□□□□□ -0.34
CRLF3-202ENST00000577725 PCDH11YQ9BZA8 1340 aa12.94□□□□□ -0.34
CRLF3-202ENST00000577725 GYS1P13807 737 aa12.94□□□□□ -0.34
CRLF3-202ENST00000577725 CHRNA5P30532 468 aa12.94□□□□□ -0.34
CRLF3-202ENST00000577725 VAMP4O75379 141 aa12.93□□□□□ -0.34
CRLF3-202ENST00000577725 ATXN8OSP0DMR3 200 aa12.93□□□□□ -0.34
CRLF3-202ENST00000577725 TWISTNBQ3B726 338 aaPredicted RBP12.93□□□□□ -0.34
CRLF3-202ENST00000577725 LDHDQ86WU2 507 aa12.93□□□□□ -0.34
CRLF3-202ENST00000577725 SSH1Q8WYL5 1049 aa12.93□□□□□ -0.34
CRLF3-202ENST00000577725 RTCBQ9Y3I0 505 aaKnown RBP12.93□□□□□ -0.34
CRLF3-202ENST00000577725 BTBD11A6QL63 1104 aa12.92□□□□□ -0.34
CRLF3-202ENST00000577725 ITPK1Q13572 414 aa12.92□□□□□ -0.34
CRLF3-202ENST00000577725 C20orf194Q5TEA3 1177 aa12.92□□□□□ -0.34
CRLF3-202ENST00000577725 SMC4Q9NTJ3 1288 aa12.92□□□□□ -0.34
CRLF3-202ENST00000577725 TNNQ9UQP3 1299 aa12.92□□□□□ -0.34
CRLF3-202ENST00000577725 PDE4DIPQ5VU43 2346 aa12.91□□□□□ -0.34
CRLF3-202ENST00000577725 ITGBL1O95965 494 aaPredicted RBP12.91□□□□□ -0.34
CRLF3-202ENST00000577725 HSP90AB1P08238 724 aaKnown RBP12.91□□□□□ -0.34
CRLF3-202ENST00000577725 CT47B1P0C2W7 299 aaPredicted RBP12.91□□□□□ -0.34
CRLF3-202ENST00000577725 ATP6V1AP38606 617 aa12.91□□□□□ -0.34
CRLF3-202ENST00000577725 SLC39A6Q13433 755 aa12.91□□□□□ -0.34
CRLF3-202ENST00000577725 PIGBQ92521 554 aa12.91□□□□□ -0.34
CRLF3-202ENST00000577725 FRAT1Q92837 279 aaPredicted RBP12.91□□□□□ -0.34
CRLF3-202ENST00000577725 GCC1Q96CN9 775 aa12.91□□□□□ -0.34
CRLF3-202ENST00000577725 SLC52A2Q9HAB3 445 aa12.91□□□□□ -0.34
CRLF3-202ENST00000577725 MRC1P22897 1456 aa12.91□□□□□ -0.34
CRLF3-202ENST00000577725 TIAM2Q8IVF5 1701 aa12.91□□□□□ -0.34
CRLF3-202ENST00000577725 CANXP27824 592 aaKnown RBP12.9□□□□□ -0.34
CRLF3-202ENST00000577725 RFC4P35249 363 aa12.9□□□□□ -0.34
CRLF3-202ENST00000577725 ARHGEF1Q92888 912 aaKnown RBP12.9□□□□□ -0.34
CRLF3-202ENST00000577725 CABP4P57796 275 aa12.89□□□□□ -0.35
CRLF3-202ENST00000577725 DGKZQ13574 1117 aa12.89□□□□□ -0.35
CRLF3-202ENST00000577725 NFATC2IPQ8NCF5 419 aa12.89□□□□□ -0.35
CRLF3-202ENST00000577725 NECTIN2Q92692 538 aa12.89□□□□□ -0.35
CRLF3-202ENST00000577725 CRBNQ96SW2 442 aa12.89□□□□□ -0.35
CRLF3-202ENST00000577725 IQCA1LA6NCM1 817 aa12.88□□□□□ -0.35
CRLF3-202ENST00000577725 NFKBIEO00221 500 aa12.88□□□□□ -0.35
CRLF3-202ENST00000577725 EIF4A1P60842 406 aaKnown RBP12.88□□□□□ -0.35
CRLF3-202ENST00000577725 NKX1-1Q15270 411 aaPredicted RBP12.88□□□□□ -0.35
CRLF3-202ENST00000577725 MRPL50Q8N5N7 158 aaKnown RBP12.88□□□□□ -0.35
CRLF3-202ENST00000577725 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.88□□□□□ -0.35
CRLF3-202ENST00000577725 EXOC6Q8TAG9 804 aa12.88□□□□□ -0.35
CRLF3-202ENST00000577725 BABAM1Q9NWV8 329 aa12.88□□□□□ -0.35
CRLF3-202ENST00000577725 ABT1Q9ULW3 272 aaKnown RBP12.88□□□□□ -0.35
CRLF3-202ENST00000577725 ECE1P42892 770 aa12.87□□□□□ -0.35
CRLF3-202ENST00000577725 SOX10P56693 466 aa12.87□□□□□ -0.35
CRLF3-202ENST00000577725 ALDH1L2Q3SY69 923 aa12.87□□□□□ -0.35
CRLF3-202ENST00000577725 ERFEQ4G0M1 354 aa12.87□□□□□ -0.35
CRLF3-202ENST00000577725 PANK1Q8TE04 598 aa12.87□□□□□ -0.35
CRLF3-202ENST00000577725 RNF216Q9NWF9 866 aaPredicted RBP12.87□□□□□ -0.35
CRLF3-202ENST00000577725 ZNF219Q9P2Y4 722 aaPredicted RBP12.87□□□□□ -0.35
CRLF3-202ENST00000577725 TSKSQ9UJT2 592 aa12.87□□□□□ -0.35
CRLF3-202ENST00000577725 ITGB4P16144 1822 aa12.87□□□□□ -0.35
CRLF3-202ENST00000577725 PRAMEF22A3QJZ6 481 aa12.86□□□□□ -0.35
CRLF3-202ENST00000577725 CA12O43570 354 aa12.86□□□□□ -0.35
CRLF3-202ENST00000577725 DDNO94850 711 aaPredicted RBP12.86□□□□□ -0.35
CRLF3-202ENST00000577725 NOB1Q9ULX3 412 aaKnown RBP12.86□□□□□ -0.35
CRLF3-202ENST00000577725 THSD7BQ9C0I4 1608 aa12.86□□□□□ -0.35
CRLF3-202ENST00000577725 ERVV-2B6SEH9 535 aa12.85□□□□□ -0.35
CRLF3-202ENST00000577725 EIF2S2P20042 333 aaKnown RBP12.85□□□□□ -0.35
CRLF3-202ENST00000577725 DDR1Q08345 913 aa12.85□□□□□ -0.35
CRLF3-202ENST00000577725 CLUAP1Q96AJ1 413 aa12.85□□□□□ -0.35
CRLF3-202ENST00000577725 CAPNS2Q96L46 248 aa12.85□□□□□ -0.35
CRLF3-202ENST00000577725 GPR101Q96P66 508 aaPredicted RBP12.85□□□□□ -0.35
CRLF3-202ENST00000577725 TAF1DQ9H5J8 278 aaPredicted RBP12.85□□□□□ -0.35
CRLF3-202ENST00000577725 ASAP1Q9ULH1 1129 aa12.85□□□□□ -0.35
CRLF3-202ENST00000577725 RLBP1P12271 317 aa12.84□□□□□ -0.35
CRLF3-202ENST00000577725 RC3H1Q5TC82 1133 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms