RNA–Protein interactions for RNA: ENST00000577315.5

MKS1-205, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-205ENST00000577315 TOMM70O94826 608 aa19.68■□□□□ 0.74
MKS1-205ENST00000577315 EIF4A1P60842 406 aaKnown RBP19.68■□□□□ 0.74
MKS1-205ENST00000577315 LMOD3Q0VAK6 560 aa19.68■□□□□ 0.74
MKS1-205ENST00000577315 NBPF10Q6P3W6 841 aaKnown RBP19.68■□□□□ 0.74
MKS1-205ENST00000577315 NBPF15Q8N660 670 aa19.68■□□□□ 0.74
MKS1-205ENST00000577315 ZNF622Q969S3 477 aaKnown RBP eCLIP19.68■□□□□ 0.74
MKS1-205ENST00000577315 HSPA6P17066 643 aa19.67■□□□□ 0.74
MKS1-205ENST00000577315 LMNB1P20700 586 aa19.67■□□□□ 0.74
MKS1-205ENST00000577315 NBPF5PQ86XG9 351 aaPredicted RBP19.67■□□□□ 0.74
MKS1-205ENST00000577315 CNKSR1Q969H4 720 aa19.67■□□□□ 0.74
MKS1-205ENST00000577315 BABAM1Q9NWV8 329 aa19.67■□□□□ 0.74
MKS1-205ENST00000577315 RIPK4P57078 832 aa19.66■□□□□ 0.74
MKS1-205ENST00000577315 STYK1Q6J9G0 422 aa19.66■□□□□ 0.74
MKS1-205ENST00000577315 TPTE2Q6XPS3 522 aa19.66■□□□□ 0.74
MKS1-205ENST00000577315 RASSF7Q02833 373 aa19.65■□□□□ 0.74
MKS1-205ENST00000577315 MASTLQ96GX5 879 aa19.65■□□□□ 0.74
MKS1-205ENST00000577315 NIP7Q9Y221 180 aaKnown RBP eCLIP19.65■□□□□ 0.74
MKS1-205ENST00000577315 ERBB4Q15303 1308 aa19.65■□□□□ 0.74
MKS1-205ENST00000577315 SLX4Q8IY92 1834 aa19.65■□□□□ 0.74
MKS1-205ENST00000577315 ERVV-1B6SEH8 477 aa19.64■□□□□ 0.73
MKS1-205ENST00000577315 SOGA3Q5TF21 947 aa19.64■□□□□ 0.73
MKS1-205ENST00000577315 C16orf71Q8IYS4 520 aaPredicted RBP19.64■□□□□ 0.73
MKS1-205ENST00000577315 CCDC24Q8N4L8 307 aa19.64■□□□□ 0.73
MKS1-205ENST00000577315 THUMPD2Q9BTF0 503 aaKnown RBP19.64■□□□□ 0.73
MKS1-205ENST00000577315 NMRK2Q9NPI5 230 aa19.64■□□□□ 0.73
MKS1-205ENST00000577315 TIAM2Q8IVF5 1701 aa19.64■□□□□ 0.73
MKS1-205ENST00000577315 SRGNP10124 158 aa19.63■□□□□ 0.73
MKS1-205ENST00000577315 TSPYL4Q9UJ04 414 aa19.63■□□□□ 0.73
MKS1-205ENST00000577315 TMPOP42166 694 aaKnown RBP19.62■□□□□ 0.73
MKS1-205ENST00000577315 RBM46Q8TBY0 533 aaKnown RBP19.62■□□□□ 0.73
MKS1-205ENST00000577315 NFKBIEO00221 500 aa19.61■□□□□ 0.73
MKS1-205ENST00000577315 C21orf2O43822 256 aa19.61■□□□□ 0.73
MKS1-205ENST00000577315 WDR43Q15061 677 aaKnown RBP eCLIP19.61■□□□□ 0.73
MKS1-205ENST00000577315 KIF6Q6ZMV9 814 aa19.61■□□□□ 0.73
MKS1-205ENST00000577315 RRP7AQ9Y3A4 280 aaKnown RBP19.61■□□□□ 0.73
MKS1-205ENST00000577315 MAP3K15Q6ZN16 1313 aa19.6■□□□□ 0.73
MKS1-205ENST00000577315 LTBP3Q9NS15 1303 aa19.6■□□□□ 0.73
MKS1-205ENST00000577315 KLRG2A4D1S0 409 aaPredicted RBP19.6■□□□□ 0.73
MKS1-205ENST00000577315 NPR1P16066 1061 aa19.6■□□□□ 0.73
MKS1-205ENST00000577315 GTF2E1P29083 439 aaPredicted RBP19.6■□□□□ 0.73
MKS1-205ENST00000577315 HLFQ16534 295 aa19.6■□□□□ 0.73
MKS1-205ENST00000577315 NYXQ9GZU5 481 aa19.6■□□□□ 0.73
MKS1-205ENST00000577315 GLTPD2A6NH11 291 aa19.59■□□□□ 0.73
MKS1-205ENST00000577315 PRPF40BQ6NWY9 871 aaKnown RBP19.59■□□□□ 0.73
MKS1-205ENST00000577315 NGEFQ8N5V2 710 aa19.59■□□□□ 0.73
MKS1-205ENST00000577315 RUNDC1Q96C34 613 aa19.59■□□□□ 0.73
MKS1-205ENST00000577315 APLP1P51693 650 aa19.58■□□□□ 0.72
MKS1-205ENST00000577315 DPY19L2Q6NUT2 758 aa19.58■□□□□ 0.72
MKS1-205ENST00000577315 TAOK3Q9H2K8 898 aa19.58■□□□□ 0.72
MKS1-205ENST00000577315 RRAGCQ9HB90 399 aa19.58■□□□□ 0.72
MKS1-205ENST00000577315 MYL6BP14649 208 aa19.57■□□□□ 0.72
MKS1-205ENST00000577315 FSTL1Q12841 308 aa19.57■□□□□ 0.72
MKS1-205ENST00000577315 ZNF219Q9P2Y4 722 aaPredicted RBP19.57■□□□□ 0.72
MKS1-205ENST00000577315 IBTKQ9P2D0 1353 aaPredicted RBP19.57■□□□□ 0.72
MKS1-205ENST00000577315 ALDH1B1P30837 517 aa19.56■□□□□ 0.72
MKS1-205ENST00000577315 PRELPP51888 382 aa19.56■□□□□ 0.72
MKS1-205ENST00000577315 FAM177BA6PVY3 158 aa19.55■□□□□ 0.72
MKS1-205ENST00000577315 VEGFAP15692 232 aaPredicted RBP19.55■□□□□ 0.72
MKS1-205ENST00000577315 ERFEQ4G0M1 354 aa19.55■□□□□ 0.72
MKS1-205ENST00000577315 CCDC93Q567U6 631 aa19.55■□□□□ 0.72
MKS1-205ENST00000577315 TTLL7Q6ZT98 887 aa19.55■□□□□ 0.72
MKS1-205ENST00000577315 CCDC146Q8IYE0 955 aa19.55■□□□□ 0.72
MKS1-205ENST00000577315 PRKRIP1Q9H875 184 aaPredicted RBP19.55■□□□□ 0.72
MKS1-205ENST00000577315 WDR90Q96KV7 1748 aa19.54■□□□□ 0.72
MKS1-205ENST00000577315 RIC1Q4ADV7 1423 aa19.54■□□□□ 0.72
MKS1-205ENST00000577315 NEUROD2Q15784 382 aa19.54■□□□□ 0.72
MKS1-205ENST00000577315 GIGYF2Q6Y7W6 1299 aaKnown RBP19.54■□□□□ 0.72
MKS1-205ENST00000577315 ANKRD36CQ5JPF3 1778 aa19.53■□□□□ 0.72
MKS1-205ENST00000577315 EIF2S2P20042 333 aaKnown RBP19.53■□□□□ 0.72
MKS1-205ENST00000577315 C7orf43Q8WVR3 580 aa19.53■□□□□ 0.72
MKS1-205ENST00000577315 ZBTB3Q9H5J0 574 aa19.53■□□□□ 0.72
MKS1-205ENST00000577315 CEP350Q5VT06 3117 aa19.52■□□□□ 0.72
MKS1-205ENST00000577315 CHL1O00533 1208 aa19.52■□□□□ 0.72
MKS1-205ENST00000577315 PARP10Q53GL7 1025 aa19.52■□□□□ 0.72
MKS1-205ENST00000577315 PPP1R42Q7Z4L9 355 aa19.52■□□□□ 0.72
MKS1-205ENST00000577315 ZNF34Q8IZ26 560 aa19.52■□□□□ 0.72
MKS1-205ENST00000577315 RTKN2Q8IZC4 609 aa19.52■□□□□ 0.72
MKS1-205ENST00000577315 SMC1BQ8NDV3 1235 aa19.52■□□□□ 0.72
MKS1-205ENST00000577315 ADAMTS8Q9UP79 889 aa19.52■□□□□ 0.72
MKS1-205ENST00000577315 CRY2Q49AN0 593 aa19.51■□□□□ 0.71
MKS1-205ENST00000577315 GPTP24298 496 aa19.5■□□□□ 0.71
MKS1-205ENST00000577315 PDIA6Q15084 440 aa19.5■□□□□ 0.71
MKS1-205ENST00000577315 HSP90AB3PQ58FF7 597 aa19.5■□□□□ 0.71
MKS1-205ENST00000577315 LRP10Q7Z4F1 713 aa19.5■□□□□ 0.71
MKS1-205ENST00000577315 TRIM35Q9UPQ4 493 aa19.5■□□□□ 0.71
MKS1-205ENST00000577315 HOXB7P09629 217 aa19.49■□□□□ 0.71
MKS1-205ENST00000577315 FKBP4Q02790 459 aaKnown RBP eCLIP19.49■□□□□ 0.71
MKS1-205ENST00000577315 GRIPAP1Q4V328 841 aa19.49■□□□□ 0.71
MKS1-205ENST00000577315 CC2D2BQ6DHV5 1058 aa19.49■□□□□ 0.71
MKS1-205ENST00000577315 NUTM1Q86Y26 1132 aa19.49■□□□□ 0.71
MKS1-205ENST00000577315 UBN2Q6ZU65 1347 aa19.49■□□□□ 0.71
MKS1-205ENST00000577315 SCN4AP35499 1836 aa19.48■□□□□ 0.71
MKS1-205ENST00000577315 ABCC12Q96J65 1359 aa19.48■□□□□ 0.71
MKS1-205ENST00000577315 SUSD4Q5VX71 490 aa19.48■□□□□ 0.71
MKS1-205ENST00000577315 RPGRQ92834 1020 aaKnown RBP19.48■□□□□ 0.71
MKS1-205ENST00000577315 DDX21Q9NR30 783 aaKnown RBP eCLIP19.48■□□□□ 0.71
MKS1-205ENST00000577315 LAS1LQ9Y4W2 734 aaKnown RBP19.48■□□□□ 0.71
MKS1-205ENST00000577315 RNF123Q5XPI4 1314 aa19.48■□□□□ 0.71
MKS1-205ENST00000577315 HOXA10P31260 410 aaPredicted RBP19.47■□□□□ 0.71
MKS1-205ENST00000577315 ZEB1P37275 1124 aaPredicted RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms