RNA–Protein interactions for RNA: ENST00000576523.1

NCBP3-206, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 249 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-206ENST00000576523 NRXN2Q9P2S2 1712 aa11.36□□□□□ -0.59
NCBP3-206ENST00000576523 NBPF26B4DH59 902 aa11.36□□□□□ -0.59
NCBP3-206ENST00000576523 PIP4K2AP48426 406 aaPredicted RBP11.36□□□□□ -0.59
NCBP3-206ENST00000576523 HNRNPUQ00839 825 aaKnown RBP eCLIP11.36□□□□□ -0.59
NCBP3-206ENST00000576523 FLIIQ13045 1269 aa11.36□□□□□ -0.59
NCBP3-206ENST00000576523 R3HDM1Q15032 1099 aaKnown RBP11.36□□□□□ -0.59
NCBP3-206ENST00000576523 NBPF14Q5TI25 921 aa11.36□□□□□ -0.59
NCBP3-206ENST00000576523 NBPF10Q6P3W6 841 aaKnown RBP11.36□□□□□ -0.59
NCBP3-206ENST00000576523 TRMT2AQ8IZ69 625 aaKnown RBP11.36□□□□□ -0.59
NCBP3-206ENST00000576523 NBPF15Q8N660 670 aa11.36□□□□□ -0.59
NCBP3-206ENST00000576523 TSPYL6Q8N831 410 aa11.36□□□□□ -0.59
NCBP3-206ENST00000576523 C8orf58Q8NAV2 365 aa11.36□□□□□ -0.59
NCBP3-206ENST00000576523 ZBTB1Q9Y2K1 713 aa11.36□□□□□ -0.59
NCBP3-206ENST00000576523 ANKRD31Q8N7Z5 1873 aa11.36□□□□□ -0.59
NCBP3-206ENST00000576523 LRP5O75197 1615 aa11.35□□□□□ -0.59
NCBP3-206ENST00000576523 KIAA1551Q9HCM1 1747 aa11.35□□□□□ -0.59
NCBP3-206ENST00000576523 SEMA3EO15041 775 aa11.35□□□□□ -0.59
NCBP3-206ENST00000576523 A1BGP04217 495 aa11.35□□□□□ -0.59
NCBP3-206ENST00000576523 SNRPA1P09661 255 aaKnown RBP11.35□□□□□ -0.59
NCBP3-206ENST00000576523 CALD1Q05682 793 aaKnown RBP11.35□□□□□ -0.59
NCBP3-206ENST00000576523 SLFN5Q08AF3 891 aa11.35□□□□□ -0.59
NCBP3-206ENST00000576523 RC3H1Q5TC82 1133 aaKnown RBP11.35□□□□□ -0.59
NCBP3-206ENST00000576523 SOS1Q07889 1333 aaPredicted RBP11.35□□□□□ -0.59
NCBP3-206ENST00000576523 LAMB2P55268 1798 aa11.34□□□□□ -0.59
NCBP3-206ENST00000576523 PDIA6Q15084 440 aa11.34□□□□□ -0.59
NCBP3-206ENST00000576523 E2F4Q16254 413 aa11.34□□□□□ -0.59
NCBP3-206ENST00000576523 LRP10Q7Z4F1 713 aa11.34□□□□□ -0.59
NCBP3-206ENST00000576523 COL23A1Q86Y22 540 aaPredicted RBP11.34□□□□□ -0.59
NCBP3-206ENST00000576523 CCDC87Q9NVE4 849 aa11.34□□□□□ -0.59
NCBP3-206ENST00000576523 STK32BQ9NY57 414 aa11.34□□□□□ -0.59
NCBP3-206ENST00000576523 CACNA1SQ13698 1873 aa11.34□□□□□ -0.59
NCBP3-206ENST00000576523 ZBED9Q6R2W3 1325 aa11.34□□□□□ -0.59
NCBP3-206ENST00000576523 APBB1O00213 710 aa11.33□□□□□ -0.6
NCBP3-206ENST00000576523 GNPATO15228 680 aa11.33□□□□□ -0.6
NCBP3-206ENST00000576523 RPS6KA4O75676 772 aa11.33□□□□□ -0.6
NCBP3-206ENST00000576523 EXOSC9Q06265 439 aaKnown RBP11.33□□□□□ -0.6
NCBP3-206ENST00000576523 GOLGA2Q08379 1002 aa11.33□□□□□ -0.6
NCBP3-206ENST00000576523 PROSER3Q2NL68 480 aa11.33□□□□□ -0.6
NCBP3-206ENST00000576523 DUSP27Q5VZP5 1158 aa11.33□□□□□ -0.6
NCBP3-206ENST00000576523 KDM4CQ9H3R0 1056 aa11.33□□□□□ -0.6
NCBP3-206ENST00000576523 BRCA1P38398 1863 aaKnown RBP11.33□□□□□ -0.6
NCBP3-206ENST00000576523 COL15A1P39059 1388 aa11.32□□□□□ -0.6
NCBP3-206ENST00000576523 ELL2O00472 640 aaPredicted RBP11.32□□□□□ -0.6
NCBP3-206ENST00000576523 ANXA1P04083 346 aa11.32□□□□□ -0.6
NCBP3-206ENST00000576523 EIF5P55010 431 aaKnown RBP11.32□□□□□ -0.6
NCBP3-206ENST00000576523 MKRN3Q13064 507 aaKnown RBP11.32□□□□□ -0.6
NCBP3-206ENST00000576523 TRAIPQ9BWF2 469 aa11.32□□□□□ -0.6
NCBP3-206ENST00000576523 GPBP1L1Q9HC44 474 aaPredicted RBP11.32□□□□□ -0.6
NCBP3-206ENST00000576523 MYH3P11055 1940 aa11.32□□□□□ -0.6
NCBP3-206ENST00000576523 SRCAPQ6ZRS2 3230 aa11.32□□□□□ -0.6
NCBP3-206ENST00000576523 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.31□□□□□ -0.6
NCBP3-206ENST00000576523 PHF14O94880 888 aa11.31□□□□□ -0.6
NCBP3-206ENST00000576523 EIF2S2P20042 333 aaKnown RBP11.31□□□□□ -0.6
NCBP3-206ENST00000576523 CANXP27824 592 aaKnown RBP11.31□□□□□ -0.6
NCBP3-206ENST00000576523 DCAF8Q5TAQ9 597 aa11.31□□□□□ -0.6
NCBP3-206ENST00000576523 FAM212AQ96EL1 285 aa11.31□□□□□ -0.6
NCBP3-206ENST00000576523 TEX13AQ9BXU3 409 aaPredicted RBP11.31□□□□□ -0.6
NCBP3-206ENST00000576523 TFCP2L1Q9NZI6 479 aa11.31□□□□□ -0.6
NCBP3-206ENST00000576523 DLEC1Q9Y238 1755 aa11.31□□□□□ -0.6
NCBP3-206ENST00000576523 TAF1P21675 1872 aa11.3□□□□□ -0.6
NCBP3-206ENST00000576523 DDX60Q8IY21 1712 aaKnown RBP11.3□□□□□ -0.6
NCBP3-206ENST00000576523 E9PSI1 815 aa11.3□□□□□ -0.6
NCBP3-206ENST00000576523 VAMP4O75379 141 aa11.3□□□□□ -0.6
NCBP3-206ENST00000576523 STARD3NLO95772 234 aa11.3□□□□□ -0.6
NCBP3-206ENST00000576523 HOXB7P09629 217 aa11.3□□□□□ -0.6
NCBP3-206ENST00000576523 SSFA2P28290 1259 aa11.3□□□□□ -0.6
NCBP3-206ENST00000576523 KCTD17Q8N5Z5 321 aa11.3□□□□□ -0.6
NCBP3-206ENST00000576523 IL27Q8NEV9 243 aa11.3□□□□□ -0.6
NCBP3-206ENST00000576523 BCL2L12Q9HB09 334 aa11.3□□□□□ -0.6
NCBP3-206ENST00000576523 SRP68Q9UHB9 627 aaKnown RBP11.3□□□□□ -0.6
NCBP3-206ENST00000576523 ARIH1Q9Y4X5 557 aaPredicted RBP11.3□□□□□ -0.6
NCBP3-206ENST00000576523 COL11A2P13942 1736 aaPredicted RBP11.29□□□□□ -0.6
NCBP3-206ENST00000576523 IL6STP40189 918 aaPredicted RBP11.29□□□□□ -0.6
NCBP3-206ENST00000576523 TWISTNBQ3B726 338 aaPredicted RBP11.29□□□□□ -0.6
NCBP3-206ENST00000576523 PELP1Q8IZL8 1130 aaKnown RBP11.29□□□□□ -0.6
NCBP3-206ENST00000576523 MYH16Q9H6N6 1097 aa11.29□□□□□ -0.6
NCBP3-206ENST00000576523 CHPF2Q9P2E5 772 aa11.29□□□□□ -0.6
NCBP3-206ENST00000576523 RTCBQ9Y3I0 505 aaKnown RBP11.29□□□□□ -0.6
NCBP3-206ENST00000576523 TNRC6CQ9HCJ0 1690 aaKnown RBP11.28□□□□□ -0.6
NCBP3-206ENST00000576523 A6NJR5 290 aa11.28□□□□□ -0.6
NCBP3-206ENST00000576523 TCERG1O14776 1098 aaKnown RBP11.28□□□□□ -0.6
NCBP3-206ENST00000576523 HDGFL1Q5TGJ6 251 aa11.28□□□□□ -0.6
NCBP3-206ENST00000576523 TTLL7Q6ZT98 887 aa11.28□□□□□ -0.6
NCBP3-206ENST00000576523 ERBB4Q15303 1308 aa11.28□□□□□ -0.6
NCBP3-206ENST00000576523 USP42Q9H9J4 1324 aaKnown RBP11.28□□□□□ -0.6
NCBP3-206ENST00000576523 GYS1P13807 737 aa11.27□□□□□ -0.61
NCBP3-206ENST00000576523 MYL6BP14649 208 aa11.27□□□□□ -0.61
NCBP3-206ENST00000576523 DDX21Q9NR30 783 aaKnown RBP eCLIP11.27□□□□□ -0.61
NCBP3-206ENST00000576523 TBC1D2BQ9UPU7 963 aa11.27□□□□□ -0.61
NCBP3-206ENST00000576523 CAMTA2O94983 1202 aa11.26□□□□□ -0.61
NCBP3-206ENST00000576523 ZBTB7AO95365 584 aa11.26□□□□□ -0.61
NCBP3-206ENST00000576523 TRAPPC3LQ5T215 181 aa11.26□□□□□ -0.61
NCBP3-206ENST00000576523 MSL1Q68DK7 614 aa11.26□□□□□ -0.61
NCBP3-206ENST00000576523 G2E3Q7L622 706 aa11.26□□□□□ -0.61
NCBP3-206ENST00000576523 PHAXQ9H814 394 aaKnown RBP11.26□□□□□ -0.61
NCBP3-206ENST00000576523 NARFQ9UHQ1 456 aa11.26□□□□□ -0.61
NCBP3-206ENST00000576523 PTGER2P43116 358 aa11.25□□□□□ -0.61
NCBP3-206ENST00000576523 USPL1Q5W0Q7 1092 aa11.25□□□□□ -0.61
NCBP3-206ENST00000576523 FLAD1Q8NFF5 587 aa11.25□□□□□ -0.61
NCBP3-206ENST00000576523 YTHDC1Q96MU7 727 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms