RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 PPP4R3BQ5MIZ7 849 aa10.21□□□□□ -0.77
RPAIN-215ENST00000575112 GPATCH3Q96I76 525 aa10.21□□□□□ -0.77
RPAIN-215ENST00000575112 CWC22Q9HCG8 908 aaKnown RBP10.21□□□□□ -0.77
RPAIN-215ENST00000575112 ARHGAP31Q2M1Z3 1444 aa10.21□□□□□ -0.78
RPAIN-215ENST00000575112 ESYT1Q9BSJ8 1104 aa10.21□□□□□ -0.78
RPAIN-215ENST00000575112 LARGE1O95461 756 aa10.2□□□□□ -0.78
RPAIN-215ENST00000575112 ATP8B2P98198 1209 aa10.2□□□□□ -0.78
RPAIN-215ENST00000575112 CHST3Q7LGC8 479 aa10.2□□□□□ -0.78
RPAIN-215ENST00000575112 EDC4Q6P2E9 1401 aaKnown RBP10.2□□□□□ -0.78
RPAIN-215ENST00000575112 PTPRMP28827 1452 aa10.2□□□□□ -0.78
RPAIN-215ENST00000575112 ZKSCAN1P17029 563 aaPredicted RBP10.2□□□□□ -0.78
RPAIN-215ENST00000575112 XAGE3Q8WTP9 111 aa10.2□□□□□ -0.78
RPAIN-215ENST00000575112 KCNF1Q9H3M0 494 aa10.2□□□□□ -0.78
RPAIN-215ENST00000575112 NEXMIFQ5QGS0 1516 aa10.2□□□□□ -0.78
RPAIN-215ENST00000575112 TMEM2Q9UHN6 1383 aa10.2□□□□□ -0.78
RPAIN-215ENST00000575112 PTPRCP08575 1304 aa10.2□□□□□ -0.78
RPAIN-215ENST00000575112 SOS1Q07889 1333 aaPredicted RBP10.2□□□□□ -0.78
RPAIN-215ENST00000575112 U2AF2P26368 475 aaKnown RBP eCLIP10.2□□□□□ -0.786e-8■□□□□ 8.3
RPAIN-215ENST00000575112 FKBP4Q02790 459 aaKnown RBP eCLIP10.2□□□□□ -0.78
RPAIN-215ENST00000575112 CHMLP26374 656 aa10.19□□□□□ -0.78
RPAIN-215ENST00000575112 CABP4P57796 275 aa10.19□□□□□ -0.78
RPAIN-215ENST00000575112 SLFNL1Q499Z3 407 aa10.19□□□□□ -0.78
RPAIN-215ENST00000575112 DDX46Q7L014 1031 aaKnown RBP10.19□□□□□ -0.78
RPAIN-215ENST00000575112 CHGBP05060 677 aa10.19□□□□□ -0.78
RPAIN-215ENST00000575112 APPP05067 770 aa10.19□□□□□ -0.78
RPAIN-215ENST00000575112 WASHC4Q2M389 1173 aa10.19□□□□□ -0.78
RPAIN-215ENST00000575112 MYRIPQ8NFW9 859 aa10.19□□□□□ -0.78
RPAIN-215ENST00000575112 BCL2L12Q9HB09 334 aa10.19□□□□□ -0.78
RPAIN-215ENST00000575112 FRMPD1Q5SYB0 1578 aa10.19□□□□□ -0.78
RPAIN-215ENST00000575112 DDX58O95786 925 aaKnown RBP10.19□□□□□ -0.78
RPAIN-215ENST00000575112 GPTP24298 496 aa10.19□□□□□ -0.78
RPAIN-215ENST00000575112 TERF1P54274 439 aa10.19□□□□□ -0.78
RPAIN-215ENST00000575112 RASEFQ8IZ41 740 aa10.19□□□□□ -0.78
RPAIN-215ENST00000575112 PRDM11Q9NQV5 511 aa10.19□□□□□ -0.78
RPAIN-215ENST00000575112 CCDC129Q6ZRS4 1044 aa10.18□□□□□ -0.78
RPAIN-215ENST00000575112 FAM227BQ96M60 508 aa10.18□□□□□ -0.78
RPAIN-215ENST00000575112 CCDC94Q9BW85 323 aaPredicted RBP10.18□□□□□ -0.78
RPAIN-215ENST00000575112 FLT4P35916 1363 aa10.18□□□□□ -0.78
RPAIN-215ENST00000575112 H3BQV1 296 aa10.18□□□□□ -0.78
RPAIN-215ENST00000575112 TATP17735 454 aaPredicted RBP10.18□□□□□ -0.78
RPAIN-215ENST00000575112 IFFO2Q5TF58 517 aa10.18□□□□□ -0.78
RPAIN-215ENST00000575112 KIF1BPQ96EK5 621 aa10.18□□□□□ -0.78
RPAIN-215ENST00000575112 ABCA9Q8IUA7 1624 aa10.18□□□□□ -0.78
RPAIN-215ENST00000575112 A0A087WZG4 1122 aa10.18□□□□□ -0.78
RPAIN-215ENST00000575112 RPAP1Q9BWH6 1393 aaPredicted RBP10.18□□□□□ -0.78
RPAIN-215ENST00000575112 ZBTB22O15209 634 aa10.17□□□□□ -0.78
RPAIN-215ENST00000575112 PDRG1Q9NUG6 133 aa10.17□□□□□ -0.78
RPAIN-215ENST00000575112 PLEKHG3A1L390 1219 aa10.17□□□□□ -0.78
RPAIN-215ENST00000575112 TULP1O00294 542 aaPredicted RBP10.17□□□□□ -0.78
RPAIN-215ENST00000575112 LRMPQ12912 555 aa10.17□□□□□ -0.78
RPAIN-215ENST00000575112 AXIN2Q9Y2T1 843 aa10.17□□□□□ -0.78
RPAIN-215ENST00000575112 NEURL4Q96JN8 1562 aa10.17□□□□□ -0.78
RPAIN-215ENST00000575112 NPHP1O15259 732 aa10.17□□□□□ -0.78
RPAIN-215ENST00000575112 HAND2P61296 217 aa10.17□□□□□ -0.78
RPAIN-215ENST00000575112 CCT2P78371 535 aaKnown RBP10.17□□□□□ -0.78
RPAIN-215ENST00000575112 CUL4AQ13619 759 aa10.17□□□□□ -0.78
RPAIN-215ENST00000575112 CSPP1Q1MSJ5 1256 aa10.17□□□□□ -0.78
RPAIN-215ENST00000575112 CKAP2LQ8IYA6 745 aa10.17□□□□□ -0.78
RPAIN-215ENST00000575112 BICD2Q8TD16 824 aa10.17□□□□□ -0.78
RPAIN-215ENST00000575112 PIBF1Q8WXW3 757 aa10.17□□□□□ -0.78
RPAIN-215ENST00000575112 BICC1Q9H694 974 aaKnown RBP10.17□□□□□ -0.78
RPAIN-215ENST00000575112 DBF4Q9UBU7 674 aaPredicted RBP10.17□□□□□ -0.78
RPAIN-215ENST00000575112 USP16Q9Y5T5 823 aa10.17□□□□□ -0.78
RPAIN-215ENST00000575112 CPS1P31327 1500 aa10.16□□□□□ -0.78
RPAIN-215ENST00000575112 RIOK3O14730 519 aaKnown RBP10.16□□□□□ -0.78
RPAIN-215ENST00000575112 FAM184AQ8NB25 1140 aa10.16□□□□□ -0.78
RPAIN-215ENST00000575112 NRBP1Q9UHY1 535 aa10.16□□□□□ -0.78
RPAIN-215ENST00000575112 RAB11FIP3O75154 756 aa10.16□□□□□ -0.78
RPAIN-215ENST00000575112 ATP2B1P20020 1258 aa10.16□□□□□ -0.78
RPAIN-215ENST00000575112 DNM1Q05193 864 aaKnown RBP10.16□□□□□ -0.78
RPAIN-215ENST00000575112 LARP1BQ659C4 914 aaKnown RBP10.16□□□□□ -0.78
RPAIN-215ENST00000575112 SMAP1Q8IYB5 467 aaPredicted RBP10.16□□□□□ -0.78
RPAIN-215ENST00000575112 TLR7Q9NYK1 1049 aaKnown RBP10.16□□□□□ -0.78
RPAIN-215ENST00000575112 HECW2Q9P2P5 1572 aa10.16□□□□□ -0.78
RPAIN-215ENST00000575112 A2ML1A8K2U0 1454 aa10.16□□□□□ -0.78
RPAIN-215ENST00000575112 A0A087WWV3 80 aa10.16□□□□□ -0.78
RPAIN-215ENST00000575112 TIMM10P62072 90 aa10.16□□□□□ -0.78
RPAIN-215ENST00000575112 RUFY2Q8WXA3 655 aa10.16□□□□□ -0.78
RPAIN-215ENST00000575112 ZNF594Q96JF6 807 aaPredicted RBP10.16□□□□□ -0.78
RPAIN-215ENST00000575112 FMNL2Q96PY5 1086 aa10.16□□□□□ -0.78
RPAIN-215ENST00000575112 ZFYVE9O95405 1425 aa10.16□□□□□ -0.78
RPAIN-215ENST00000575112 MBD3O95983 291 aa10.15□□□□□ -0.78
RPAIN-215ENST00000575112 AK2P54819 239 aa10.15□□□□□ -0.78
RPAIN-215ENST00000575112 DMTNQ08495 405 aa10.15□□□□□ -0.78
RPAIN-215ENST00000575112 SYT1P21579 422 aa10.15□□□□□ -0.79
RPAIN-215ENST00000575112 EIF4A1P60842 406 aaKnown RBP10.15□□□□□ -0.79
RPAIN-215ENST00000575112 PTH1RQ03431 593 aa10.15□□□□□ -0.79
RPAIN-215ENST00000575112 CCDC82Q8N4S0 544 aa10.15□□□□□ -0.79
RPAIN-215ENST00000575112 SUCLG2Q96I99 432 aa10.15□□□□□ -0.79
RPAIN-215ENST00000575112 SEC62Q99442 399 aaKnown RBP10.15□□□□□ -0.79
RPAIN-215ENST00000575112 MTMR7Q9Y216 660 aa10.15□□□□□ -0.79
RPAIN-215ENST00000575112 TBX22Q9Y458 520 aa10.15□□□□□ -0.79
RPAIN-215ENST00000575112 CYP46A1Q9Y6A2 500 aa10.15□□□□□ -0.79
RPAIN-215ENST00000575112 SALL3Q9BXA9 1300 aa10.15□□□□□ -0.79
RPAIN-215ENST00000575112 ANKRD26Q9UPS8 1709 aa10.14□□□□□ -0.79
RPAIN-215ENST00000575112 GOLIM4O00461 696 aa10.14□□□□□ -0.79
RPAIN-215ENST00000575112 A1BGP04217 495 aa10.14□□□□□ -0.79
RPAIN-215ENST00000575112 ADCK5Q3MIX3 580 aa10.14□□□□□ -0.79
RPAIN-215ENST00000575112 RUFY3Q7L099 469 aa10.14□□□□□ -0.79
RPAIN-215ENST00000575112 ZNF496Q96IT1 587 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms