RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 RBM6P78332 1123 aaKnown RBP17.1■□□□□ 0.33
SMG6-215ENST00000574501 ADCK5Q3MIX3 580 aa17.1■□□□□ 0.33
SMG6-215ENST00000574501 NECTIN2Q92692 538 aa17.1■□□□□ 0.33
SMG6-215ENST00000574501 DNAJC25Q9H1X3 360 aa17.1■□□□□ 0.33
SMG6-215ENST00000574501 CDK12Q9NYV4 1490 aaPredicted RBP17.1■□□□□ 0.33
SMG6-215ENST00000574501 KRT85P78386 507 aa17.1■□□□□ 0.33
SMG6-215ENST00000574501 ST3GAL1Q11201 340 aa17.1■□□□□ 0.33
SMG6-215ENST00000574501 KLHL34Q8N239 644 aa17.1■□□□□ 0.33
SMG6-215ENST00000574501 TRERF1Q96PN7 1200 aa17.1■□□□□ 0.33
SMG6-215ENST00000574501 CLTCQ00610 1675 aaKnown RBP17.1■□□□□ 0.33
SMG6-215ENST00000574501 SIGLEC1Q9BZZ2 1709 aa17.1■□□□□ 0.33
SMG6-215ENST00000574501 CDC37L1Q7L3B6 337 aa17.09■□□□□ 0.33
SMG6-215ENST00000574501 JAKMIP1Q96N16 626 aaKnown RBP17.09■□□□□ 0.33
SMG6-215ENST00000574501 PDRG1Q9NUG6 133 aa17.09■□□□□ 0.33
SMG6-215ENST00000574501 TRMT1Q9NXH9 659 aaKnown RBP17.09■□□□□ 0.33
SMG6-215ENST00000574501 TFIP11Q9UBB9 837 aaKnown RBP17.09■□□□□ 0.33
SMG6-215ENST00000574501 POGZQ7Z3K3 1410 aa17.09■□□□□ 0.33
SMG6-215ENST00000574501 ZNF165P49910 485 aa17.09■□□□□ 0.33
SMG6-215ENST00000574501 LARP1BQ659C4 914 aaKnown RBP17.09■□□□□ 0.33
SMG6-215ENST00000574501 GOLGA6L4A6NEF3 574 aa17.08■□□□□ 0.33
SMG6-215ENST00000574501 ME3Q16798 604 aa17.08■□□□□ 0.33
SMG6-215ENST00000574501 COG3Q96JB2 828 aa17.08■□□□□ 0.33
SMG6-215ENST00000574501 EPB41L2O43491 1005 aaKnown RBP17.08■□□□□ 0.32
SMG6-215ENST00000574501 GNAI3P08754 354 aa17.08■□□□□ 0.32
SMG6-215ENST00000574501 PTPN14Q15678 1187 aa17.08■□□□□ 0.32
SMG6-215ENST00000574501 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.08■□□□□ 0.32
SMG6-215ENST00000574501 LRRC8AQ8IWT6 810 aa17.08■□□□□ 0.32
SMG6-215ENST00000574501 IPO4Q8TEX9 1081 aaKnown RBP17.08■□□□□ 0.32
SMG6-215ENST00000574501 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.07■□□□□ 0.32
SMG6-215ENST00000574501 TDRD7Q8NHU6 1098 aaKnown RBP17.07■□□□□ 0.32
SMG6-215ENST00000574501 PI4K2BQ8TCG2 481 aa17.07■□□□□ 0.32
SMG6-215ENST00000574501 TSPYL4Q9UJ04 414 aa17.07■□□□□ 0.32
SMG6-215ENST00000574501 PRPF40BQ6NWY9 871 aaKnown RBP17.07■□□□□ 0.32
SMG6-215ENST00000574501 FAM53CQ9NYF3 392 aa17.07■□□□□ 0.32
SMG6-215ENST00000574501 PIK3C2BO00750 1634 aa17.07■□□□□ 0.32
SMG6-215ENST00000574501 NR1I2O75469 434 aa17.06■□□□□ 0.32
SMG6-215ENST00000574501 PTH1RQ03431 593 aa17.06■□□□□ 0.32
SMG6-215ENST00000574501 EIF4A2Q14240 407 aaKnown RBP17.06■□□□□ 0.32
SMG6-215ENST00000574501 ZNF446Q9NWS9 450 aa17.06■□□□□ 0.32
SMG6-215ENST00000574501 NCKAP5LQ9HCH0 1330 aa17.06■□□□□ 0.32
SMG6-215ENST00000574501 FOXO3O43524 673 aa17.06■□□□□ 0.32
SMG6-215ENST00000574501 CAPN2P17655 700 aa17.06■□□□□ 0.32
SMG6-215ENST00000574501 SURF6O75683 361 aaKnown RBP17.05■□□□□ 0.32
SMG6-215ENST00000574501 SKILP12757 684 aa17.05■□□□□ 0.32
SMG6-215ENST00000574501 SPATA32Q96LK8 384 aa17.05■□□□□ 0.32
SMG6-215ENST00000574501 HECW2Q9P2P5 1572 aa17.05■□□□□ 0.32
SMG6-215ENST00000574501 FLIIQ13045 1269 aa17.05■□□□□ 0.32
SMG6-215ENST00000574501 VPS53Q5VIR6 699 aa17.05■□□□□ 0.32
SMG6-215ENST00000574501 CALCOCO1Q9P1Z2 691 aa17.05■□□□□ 0.32
SMG6-215ENST00000574501 AOX1Q06278 1338 aa17.04■□□□□ 0.32
SMG6-215ENST00000574501 NYAP1Q6ZVC0 841 aa17.04■□□□□ 0.32
SMG6-215ENST00000574501 CNTROBQ8N137 903 aa17.04■□□□□ 0.32
SMG6-215ENST00000574501 GTF3C6Q969F1 213 aa17.04■□□□□ 0.32
SMG6-215ENST00000574501 ERO1AQ96HE7 468 aa17.04■□□□□ 0.32
SMG6-215ENST00000574501 STK31Q9BXU1 1019 aa17.04■□□□□ 0.32
SMG6-215ENST00000574501 CLSTN2Q9H4D0 955 aa17.04■□□□□ 0.32
SMG6-215ENST00000574501 TPCN1Q9ULQ1 816 aa17.04■□□□□ 0.32
SMG6-215ENST00000574501 CYP46A1Q9Y6A2 500 aa17.04■□□□□ 0.32
SMG6-215ENST00000574501 CCDC171Q6TFL3 1326 aa17.04■□□□□ 0.32
SMG6-215ENST00000574501 COL9A3Q14050 684 aaPredicted RBP17.04■□□□□ 0.32
SMG6-215ENST00000574501 FILIP1Q7Z7B0 1213 aa17.04■□□□□ 0.32
SMG6-215ENST00000574501 SH2B1Q9NRF2 756 aaPredicted RBP17.04■□□□□ 0.32
SMG6-215ENST00000574501 USP16Q9Y5T5 823 aa17.04■□□□□ 0.32
SMG6-215ENST00000574501 ERBB3P21860 1342 aa17.03■□□□□ 0.32
SMG6-215ENST00000574501 BICD2Q8TD16 824 aa17.03■□□□□ 0.32
SMG6-215ENST00000574501 ZSCAN31Q96LW9 406 aaPredicted RBP17.03■□□□□ 0.32
SMG6-215ENST00000574501 NOL10Q9BSC4 688 aaKnown RBP17.03■□□□□ 0.32
SMG6-215ENST00000574501 ELP1O95163 1332 aa17.03■□□□□ 0.32
SMG6-215ENST00000574501 SOS1Q07889 1333 aaPredicted RBP17.03■□□□□ 0.32
SMG6-215ENST00000574501 TTC21AQ8NDW8 1320 aa17.03■□□□□ 0.32
SMG6-215ENST00000574501 AATKQ6ZMQ8 1374 aa17.03■□□□□ 0.32
SMG6-215ENST00000574501 ATP7BP35670 1465 aa17.02■□□□□ 0.32
SMG6-215ENST00000574501 CRB1P82279 1406 aa17.02■□□□□ 0.32
SMG6-215ENST00000574501 SYTL4Q96C24 671 aaPredicted RBP17.02■□□□□ 0.32
SMG6-215ENST00000574501 DDX19AQ9NUU7 478 aaKnown RBP17.02■□□□□ 0.32
SMG6-215ENST00000574501 RHPN1Q8TCX5 695 aa17.02■□□□□ 0.32
SMG6-215ENST00000574501 LEO1Q8WVC0 666 aaPredicted RBP17.02■□□□□ 0.32
SMG6-215ENST00000574501 ZSWIM6Q9HCJ5 1215 aa17.02■□□□□ 0.32
SMG6-215ENST00000574501 PREX1Q8TCU6 1659 aa17.02■□□□□ 0.31
SMG6-215ENST00000574501 EDC4Q6P2E9 1401 aaKnown RBP17.02■□□□□ 0.31
SMG6-215ENST00000574501 GOLGA6L19H0YKK7 550 aa17.01■□□□□ 0.31
SMG6-215ENST00000574501 SLU7O95391 586 aaKnown RBP17.01■□□□□ 0.31
SMG6-215ENST00000574501 RBM43Q6ZSC3 357 aaKnown RBP17.01■□□□□ 0.31
SMG6-215ENST00000574501 TCEANC2Q96MN5 208 aa17.01■□□□□ 0.31
SMG6-215ENST00000574501 DNAJC2Q99543 621 aaKnown RBP17.01■□□□□ 0.31
SMG6-215ENST00000574501 USP44Q9H0E7 712 aa17.01■□□□□ 0.31
SMG6-215ENST00000574501 CCDC69A6NI79 296 aa17.01■□□□□ 0.31
SMG6-215ENST00000574501 UBTFL1P0CB47 393 aaPredicted RBP17.01■□□□□ 0.31
SMG6-215ENST00000574501 ERCC6LQ2NKX8 1250 aa17.01■□□□□ 0.31
SMG6-215ENST00000574501 PPP1R42Q7Z4L9 355 aa17.01■□□□□ 0.31
SMG6-215ENST00000574501 KIF1BPQ96EK5 621 aa17.01■□□□□ 0.31
SMG6-215ENST00000574501 PGBD1Q96JS3 809 aa17.01■□□□□ 0.31
SMG6-215ENST00000574501 A0A087WWV3 80 aa17■□□□□ 0.31
SMG6-215ENST00000574501 TULP2O00295 520 aa17■□□□□ 0.31
SMG6-215ENST00000574501 HNRNPH2P55795 449 aaKnown RBP17■□□□□ 0.31
SMG6-215ENST00000574501 C11orf57Q6ZUT1 292 aaPredicted RBP17■□□□□ 0.31
SMG6-215ENST00000574501 LRRN4CLQ8ND94 238 aa17■□□□□ 0.31
SMG6-215ENST00000574501 SCAND2PQ9GZW5 306 aaPredicted RBP17■□□□□ 0.31
SMG6-215ENST00000574501 MYO5BQ9ULV0 1848 aa17■□□□□ 0.31
SMG6-215ENST00000574501 NPHP3Q7Z494 1330 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 354.4 ms