RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 TRIM35Q9UPQ4 493 aa34.18■■■■□ 3.06
NPLOC4-215ENST00000574095 MYL6BP14649 208 aa34.17■■■■□ 3.06
NPLOC4-215ENST00000574095 HLFQ16534 295 aa34.17■■■■□ 3.06
NPLOC4-215ENST00000574095 BABAM1Q9NWV8 329 aa34.17■■■■□ 3.06
NPLOC4-215ENST00000574095 NIP7Q9Y221 180 aaKnown RBP eCLIP34.16■■■■□ 3.06
NPLOC4-215ENST00000574095 ST5P78524 1137 aa34.15■■■■□ 3.06
NPLOC4-215ENST00000574095 C9orf131Q5VYM1 1079 aa34.15■■■■□ 3.06
NPLOC4-215ENST00000574095 ZNF622Q969S3 477 aaKnown RBP eCLIP34.15■■■■□ 3.065e-10■■□□□ 12.1
NPLOC4-215ENST00000574095 NBPF5PQ86XG9 351 aaPredicted RBP34.14■■■■□ 3.06
NPLOC4-215ENST00000574095 PDZRN3Q9UPQ7 1066 aa34.14■■■■□ 3.06
NPLOC4-215ENST00000574095 RGL2O15211 777 aa34.13■■■■□ 3.05
NPLOC4-215ENST00000574095 TTLL7Q6ZT98 887 aa34.13■■■■□ 3.05
NPLOC4-215ENST00000574095 COL11A2P13942 1736 aaPredicted RBP34.13■■■■□ 3.05
NPLOC4-215ENST00000574095 EIF2S2P20042 333 aaKnown RBP34.12■■■■□ 3.05
NPLOC4-215ENST00000574095 LAS1LQ9Y4W2 734 aaKnown RBP34.12■■■■□ 3.05
NPLOC4-215ENST00000574095 FAM177BA6PVY3 158 aa34.11■■■■□ 3.05
NPLOC4-215ENST00000574095 SBF1O95248 1867 aa34.11■■■■□ 3.05
NPLOC4-215ENST00000574095 NUP98P52948 1817 aa34.1■■■■□ 3.05
NPLOC4-215ENST00000574095 CHL1O00533 1208 aa34.09■■■■□ 3.05
NPLOC4-215ENST00000574095 KIF6Q6ZMV9 814 aa34.09■■■■□ 3.05
NPLOC4-215ENST00000574095 ERBB4Q15303 1308 aa34.08■■■■□ 3.05
NPLOC4-215ENST00000574095 MAP3K15Q6ZN16 1313 aa34.08■■■■□ 3.05
NPLOC4-215ENST00000574095 ZNF316A6NFI3 1004 aaPredicted RBP34.08■■■■□ 3.05
NPLOC4-215ENST00000574095 ERVV-1B6SEH8 477 aa34.08■■■■□ 3.05
NPLOC4-215ENST00000574095 RASSF7Q02833 373 aa34.08■■■■□ 3.05
NPLOC4-215ENST00000574095 TPTE2Q6XPS3 522 aa34.08■■■■□ 3.05
NPLOC4-215ENST00000574095 RNF181Q9P0P0 153 aa34.08■■■■□ 3.05
NPLOC4-215ENST00000574095 CCDC184Q52MB2 194 aa34.06■■■■□ 3.04
NPLOC4-215ENST00000574095 ZBTB3Q9H5J0 574 aa34.06■■■■□ 3.04
NPLOC4-215ENST00000574095 ZNF219Q9P2Y4 722 aaPredicted RBP34.06■■■■□ 3.04
NPLOC4-215ENST00000574095 APAF1O14727 1248 aa34.05■■■■□ 3.04
NPLOC4-215ENST00000574095 PDIA6Q15084 440 aa34.05■■■■□ 3.04
NPLOC4-215ENST00000574095 KRT24Q2M2I5 525 aa34.05■■■■□ 3.04
NPLOC4-215ENST00000574095 NECTIN2Q92692 538 aa34.05■■■■□ 3.04
NPLOC4-215ENST00000574095 ANXA1P04083 346 aa34.04■■■■□ 3.04
NPLOC4-215ENST00000574095 SRGNP10124 158 aa34.04■■■■□ 3.04
NPLOC4-215ENST00000574095 CACNA1SQ13698 1873 aa34.03■■■■□ 3.04
NPLOC4-215ENST00000574095 C21orf2O43822 256 aa34.03■■■■□ 3.04
NPLOC4-215ENST00000574095 PROSER3Q2NL68 480 aa34.03■■■■□ 3.04
NPLOC4-215ENST00000574095 STYK1Q6J9G0 422 aa34.02■■■■□ 3.04
NPLOC4-215ENST00000574095 LRP10Q7Z4F1 713 aa34.02■■■■□ 3.04
NPLOC4-215ENST00000574095 CNKSR1Q969H4 720 aa34.02■■■■□ 3.04
NPLOC4-215ENST00000574095 MASTLQ96GX5 879 aa34.02■■■■□ 3.04
NPLOC4-215ENST00000574095 SENP3-EIF4A1A0A087X0R7 540 aa34.01■■■■□ 3.03
NPLOC4-215ENST00000574095 GTF2E1P29083 439 aaPredicted RBP34.01■■■■□ 3.03
NPLOC4-215ENST00000574095 PRELPP51888 382 aa34.01■■■■□ 3.03
NPLOC4-215ENST00000574095 SLX4Q8IY92 1834 aa34.01■■■■□ 3.03
NPLOC4-215ENST00000574095 CCDC88AQ3V6T2 1871 aa34.01■■■■□ 3.03
NPLOC4-215ENST00000574095 KIF3CO14782 793 aa34■■■■□ 3.03
NPLOC4-215ENST00000574095 GPTP24298 496 aa34■■■■□ 3.03
NPLOC4-215ENST00000574095 NFKBIEO00221 500 aa33.98■■■■□ 3.03
NPLOC4-215ENST00000574095 LMNB1P20700 586 aa33.98■■■■□ 3.03
NPLOC4-215ENST00000574095 CFAP44Q96MT7 982 aa33.98■■■■□ 3.03
NPLOC4-215ENST00000574095 KLRG2A4D1S0 409 aaPredicted RBP33.97■■■■□ 3.03
NPLOC4-215ENST00000574095 PRPF40BQ6NWY9 871 aaKnown RBP33.97■■■■□ 3.03
NPLOC4-215ENST00000574095 GIGYF2Q6Y7W6 1299 aaKnown RBP33.97■■■■□ 3.03
NPLOC4-215ENST00000574095 NUTM1Q86Y26 1132 aa33.97■■■■□ 3.03
NPLOC4-215ENST00000574095 NYXQ9GZU5 481 aa33.97■■■■□ 3.03
NPLOC4-215ENST00000574095 ZNF34Q8IZ26 560 aa33.96■■■■□ 3.03
NPLOC4-215ENST00000574095 NMRK2Q9NPI5 230 aa33.96■■■■□ 3.03
NPLOC4-215ENST00000574095 UBN2Q6ZU65 1347 aa33.96■■■■□ 3.03
NPLOC4-215ENST00000574095 NPR1P16066 1061 aa33.95■■■■□ 3.03
NPLOC4-215ENST00000574095 ARFGEF2Q9Y6D5 1785 aa33.95■■■■□ 3.02
NPLOC4-215ENST00000574095 ERFEQ4G0M1 354 aa33.94■■■■□ 3.02
NPLOC4-215ENST00000574095 SUSD4Q5VX71 490 aa33.94■■■■□ 3.02
NPLOC4-215ENST00000574095 COPS6Q7L5N1 327 aa33.94■■■■□ 3.02
NPLOC4-215ENST00000574095 MBIPQ9NS73 344 aa33.94■■■■□ 3.02
NPLOC4-215ENST00000574095 FER1L6Q2WGJ9 1857 aa33.94■■■■□ 3.02
NPLOC4-215ENST00000574095 AIMP1Q12904 312 aaKnown RBP33.93■■■■□ 3.02
NPLOC4-215ENST00000574095 XAGE3Q8WTP9 111 aa33.92■■■■□ 3.02
NPLOC4-215ENST00000574095 DDX21Q9NR30 783 aaKnown RBP eCLIP33.92■■■■□ 3.02
NPLOC4-215ENST00000574095 ABCC12Q96J65 1359 aa33.92■■■■□ 3.02
NPLOC4-215ENST00000574095 TNRC6CQ9HCJ0 1690 aaKnown RBP33.91■■■■□ 3.02
NPLOC4-215ENST00000574095 ANP32CO43423 234 aa33.91■■■■□ 3.02
NPLOC4-215ENST00000574095 ZNF853P0CG23 659 aa33.91■■■■□ 3.02
NPLOC4-215ENST00000574095 HDGFL1Q5TGJ6 251 aa33.91■■■■□ 3.02
NPLOC4-215ENST00000574095 CHPF2Q9P2E5 772 aa33.9■■■■□ 3.02
NPLOC4-215ENST00000574095 KDM2BQ8NHM5 1336 aa33.89■■■■□ 3.02
NPLOC4-215ENST00000574095 DUSP27Q5VZP5 1158 aa33.89■■■■□ 3.02
NPLOC4-215ENST00000574095 HOXB7P09629 217 aa33.88■■■■□ 3.01
NPLOC4-215ENST00000574095 IFT57Q9NWB7 429 aa33.88■■■■□ 3.01
NPLOC4-215ENST00000574095 IBTKQ9P2D0 1353 aaPredicted RBP33.87■■■■□ 3.01
NPLOC4-215ENST00000574095 ZC3H4Q9UPT8 1303 aaKnown RBP33.87■■■■□ 3.01
NPLOC4-215ENST00000574095 NTSR2O95665 410 aa33.87■■■■□ 3.01
NPLOC4-215ENST00000574095 GNAI1P63096 354 aa33.87■■■■□ 3.01
NPLOC4-215ENST00000574095 CALD1Q05682 793 aaKnown RBP33.87■■■■□ 3.01
NPLOC4-215ENST00000574095 C7orf43Q8WVR3 580 aa33.87■■■■□ 3.01
NPLOC4-215ENST00000574095 TAOK3Q9H2K8 898 aa33.87■■■■□ 3.01
NPLOC4-215ENST00000574095 SOGA3Q5TF21 947 aa33.86■■■■□ 3.01
NPLOC4-215ENST00000574095 PPP1R42Q7Z4L9 355 aa33.86■■■■□ 3.01
NPLOC4-215ENST00000574095 RRAGCQ9HB90 399 aa33.86■■■■□ 3.01
NPLOC4-215ENST00000574095 MRS2Q9HD23 443 aa33.86■■■■□ 3.01
NPLOC4-215ENST00000574095 TIAM2Q8IVF5 1701 aa33.86■■■■□ 3.01
NPLOC4-215ENST00000574095 ALDH1B1P30837 517 aa33.85■■■■□ 3.01
NPLOC4-215ENST00000574095 PARP10Q53GL7 1025 aa33.85■■■■□ 3.01
NPLOC4-215ENST00000574095 CRY2Q49AN0 593 aa33.84■■■■□ 3.01
NPLOC4-215ENST00000574095 DICER1Q9UPY3 1922 aaKnown RBP33.84■■■■□ 3.01
NPLOC4-215ENST00000574095 LTBP3Q9NS15 1303 aa33.83■■■■□ 3.01
NPLOC4-215ENST00000574095 ANKRD36CQ5JPF3 1778 aa33.83■■■■□ 3.01
NPLOC4-215ENST00000574095 TOMM70O94826 608 aa33.83■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms