RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 NPHP1O15259 732 aa14.9□□□□□ -0.02
RPAIN-214ENST00000574003 ANXA1P04083 346 aa14.9□□□□□ -0.02
RPAIN-214ENST00000574003 PRELPP51888 382 aa14.9□□□□□ -0.02
RPAIN-214ENST00000574003 KRT24Q2M2I5 525 aa14.9□□□□□ -0.02
RPAIN-214ENST00000574003 CCDC184Q52MB2 194 aa14.9□□□□□ -0.02
RPAIN-214ENST00000574003 TTLL6Q8N841 843 aa14.9□□□□□ -0.02
RPAIN-214ENST00000574003 CNBD1Q8NA66 436 aa14.9□□□□□ -0.02
RPAIN-214ENST00000574003 RUNDC1Q96C34 613 aa14.9□□□□□ -0.02
RPAIN-214ENST00000574003 TRIM35Q9UPQ4 493 aa14.9□□□□□ -0.02
RPAIN-214ENST00000574003 EIF2S2P20042 333 aaKnown RBP14.89□□□□□ -0.03
RPAIN-214ENST00000574003 NECTIN2Q92692 538 aa14.89□□□□□ -0.03
RPAIN-214ENST00000574003 BRIP1Q9BX63 1249 aa14.89□□□□□ -0.03
RPAIN-214ENST00000574003 RNF181Q9P0P0 153 aa14.89□□□□□ -0.03
RPAIN-214ENST00000574003 NIP7Q9Y221 180 aaKnown RBP eCLIP14.89□□□□□ -0.03
RPAIN-214ENST00000574003 LAS1LQ9Y4W2 734 aaKnown RBP14.89□□□□□ -0.03
RPAIN-214ENST00000574003 SBF1O95248 1867 aa14.89□□□□□ -0.03
RPAIN-214ENST00000574003 PROSER3Q2NL68 480 aa14.88□□□□□ -0.03
RPAIN-214ENST00000574003 NBPF5PQ86XG9 351 aaPredicted RBP14.88□□□□□ -0.03
RPAIN-214ENST00000574003 CACNA1SQ13698 1873 aa14.87□□□□□ -0.03
RPAIN-214ENST00000574003 KIF3CO14782 793 aa14.87□□□□□ -0.03
RPAIN-214ENST00000574003 PDE6BP35913 854 aa14.87□□□□□ -0.03
RPAIN-214ENST00000574003 CLEC4GQ6UXB4 293 aa14.87□□□□□ -0.03
RPAIN-214ENST00000574003 ZBTB3Q9H5J0 574 aa14.87□□□□□ -0.03
RPAIN-214ENST00000574003 NMRK2Q9NPI5 230 aa14.87□□□□□ -0.03
RPAIN-214ENST00000574003 C21orf2O43822 256 aa14.86□□□□□ -0.03
RPAIN-214ENST00000574003 GPTP24298 496 aa14.86□□□□□ -0.03
RPAIN-214ENST00000574003 ST5P78524 1137 aa14.86□□□□□ -0.03
RPAIN-214ENST00000574003 LMOD3Q0VAK6 560 aa14.86□□□□□ -0.03
RPAIN-214ENST00000574003 PDIA6Q15084 440 aa14.86□□□□□ -0.03
RPAIN-214ENST00000574003 ZNF652Q9Y2D9 606 aa14.86□□□□□ -0.03
RPAIN-214ENST00000574003 SLX4Q8IY92 1834 aa14.86□□□□□ -0.03
RPAIN-214ENST00000574003 NUP98P52948 1817 aa14.85□□□□□ -0.03
RPAIN-214ENST00000574003 CCDC88AQ3V6T2 1871 aa14.85□□□□□ -0.03
RPAIN-214ENST00000574003 NFKBIEO00221 500 aa14.85□□□□□ -0.03
RPAIN-214ENST00000574003 LRP10Q7Z4F1 713 aa14.85□□□□□ -0.03
RPAIN-214ENST00000574003 NUTM1Q86Y26 1132 aa14.85□□□□□ -0.03
RPAIN-214ENST00000574003 MAP3K15Q6ZN16 1313 aa14.85□□□□□ -0.03
RPAIN-214ENST00000574003 CHL1O00533 1208 aa14.84□□□□□ -0.03
RPAIN-214ENST00000574003 APAF1O14727 1248 aa14.84□□□□□ -0.03
RPAIN-214ENST00000574003 SRGNP10124 158 aa14.84□□□□□ -0.03
RPAIN-214ENST00000574003 ZEB1P37275 1124 aaPredicted RBP14.84□□□□□ -0.03
RPAIN-214ENST00000574003 KIF6Q6ZMV9 814 aa14.84□□□□□ -0.03
RPAIN-214ENST00000574003 ABCC12Q96J65 1359 aa14.84□□□□□ -0.03
RPAIN-214ENST00000574003 OLFM4Q6UX06 510 aa14.83□□□□□ -0.04
RPAIN-214ENST00000574003 TPTE2Q6XPS3 522 aa14.83□□□□□ -0.04
RPAIN-214ENST00000574003 ZNF428Q96B54 188 aa14.83□□□□□ -0.04
RPAIN-214ENST00000574003 UBN2Q6ZU65 1347 aa14.83□□□□□ -0.04
RPAIN-214ENST00000574003 TNRC6CQ9HCJ0 1690 aaKnown RBP14.82□□□□□ -0.04
RPAIN-214ENST00000574003 ERVV-1B6SEH8 477 aa14.82□□□□□ -0.04
RPAIN-214ENST00000574003 AIMP1Q12904 312 aaKnown RBP14.82□□□□□ -0.04
RPAIN-214ENST00000574003 ERFEQ4G0M1 354 aa14.82□□□□□ -0.04
RPAIN-214ENST00000574003 SUSD4Q5VX71 490 aa14.82□□□□□ -0.04
RPAIN-214ENST00000574003 STYK1Q6J9G0 422 aa14.82□□□□□ -0.04
RPAIN-214ENST00000574003 PRPF40BQ6NWY9 871 aaKnown RBP14.82□□□□□ -0.04
RPAIN-214ENST00000574003 SLC51AQ86UW1 340 aa14.82□□□□□ -0.04
RPAIN-214ENST00000574003 MASTLQ96GX5 879 aa14.82□□□□□ -0.04
RPAIN-214ENST00000574003 BABAM1Q9NWV8 329 aa14.81□□□□□ -0.04
RPAIN-214ENST00000574003 ZNF316A6NFI3 1004 aaPredicted RBP14.8□□□□□ -0.04
RPAIN-214ENST00000574003 LMNB1P20700 586 aa14.8□□□□□ -0.04
RPAIN-214ENST00000574003 GTF2E1P29083 439 aaPredicted RBP14.8□□□□□ -0.04
RPAIN-214ENST00000574003 COPS6Q7L5N1 327 aa14.8□□□□□ -0.04
RPAIN-214ENST00000574003 XAGE3Q8WTP9 111 aa14.8□□□□□ -0.04
RPAIN-214ENST00000574003 CNKSR1Q969H4 720 aa14.8□□□□□ -0.04
RPAIN-214ENST00000574003 RRAGCQ9HB90 399 aa14.8□□□□□ -0.04
RPAIN-214ENST00000574003 PDZRN3Q9UPQ7 1066 aa14.8□□□□□ -0.04
RPAIN-214ENST00000574003 FER1L6Q2WGJ9 1857 aa14.8□□□□□ -0.04
RPAIN-214ENST00000574003 RGL2O15211 777 aa14.79□□□□□ -0.04
RPAIN-214ENST00000574003 ERBB4Q15303 1308 aa14.79□□□□□ -0.04
RPAIN-214ENST00000574003 GIGYF2Q6Y7W6 1299 aaKnown RBP14.79□□□□□ -0.04
RPAIN-214ENST00000574003 C3orf67Q6ZVT6 689 aa14.79□□□□□ -0.04
RPAIN-214ENST00000574003 ZNF34Q8IZ26 560 aa14.79□□□□□ -0.04
RPAIN-214ENST00000574003 MBIPQ9NS73 344 aa14.79□□□□□ -0.04
RPAIN-214ENST00000574003 CHPF2Q9P2E5 772 aa14.79□□□□□ -0.04
RPAIN-214ENST00000574003 KLRG2A4D1S0 409 aaPredicted RBP14.78□□□□□ -0.04
RPAIN-214ENST00000574003 NTSR2O95665 410 aa14.78□□□□□ -0.04
RPAIN-214ENST00000574003 NPR1P16066 1061 aa14.78□□□□□ -0.04
RPAIN-214ENST00000574003 C7orf43Q8WVR3 580 aa14.78□□□□□ -0.04
RPAIN-214ENST00000574003 TIAM2Q8IVF5 1701 aa14.78□□□□□ -0.04
RPAIN-214ENST00000574003 ELL2O00472 640 aaPredicted RBP14.77□□□□□ -0.05
RPAIN-214ENST00000574003 DUSP27Q5VZP5 1158 aa14.77□□□□□ -0.05
RPAIN-214ENST00000574003 SYNE4Q8N205 404 aa14.77□□□□□ -0.05
RPAIN-214ENST00000574003 CFAP44Q96MT7 982 aa14.77□□□□□ -0.05
RPAIN-214ENST00000574003 ARFGEF2Q9Y6D5 1785 aa14.77□□□□□ -0.05
RPAIN-214ENST00000574003 ZNF853P0CG23 659 aa14.76□□□□□ -0.05
RPAIN-214ENST00000574003 HDGFL1Q5TGJ6 251 aa14.76□□□□□ -0.05
RPAIN-214ENST00000574003 NYXQ9GZU5 481 aa14.76□□□□□ -0.05
RPAIN-214ENST00000574003 TAOK3Q9H2K8 898 aa14.76□□□□□ -0.05
RPAIN-214ENST00000574003 DDX21Q9NR30 783 aaKnown RBP eCLIP14.76□□□□□ -0.05
RPAIN-214ENST00000574003 KDM2BQ8NHM5 1336 aa14.75□□□□□ -0.05
RPAIN-214ENST00000574003 TCERG1O14776 1098 aaKnown RBP14.75□□□□□ -0.05
RPAIN-214ENST00000574003 HSPA6P17066 643 aa14.75□□□□□ -0.05
RPAIN-214ENST00000574003 CEP350Q5VT06 3117 aa14.74□□□□□ -0.05
RPAIN-214ENST00000574003 TOMM70O94826 608 aa14.74□□□□□ -0.05
RPAIN-214ENST00000574003 CRY2Q49AN0 593 aa14.74□□□□□ -0.05
RPAIN-214ENST00000574003 MRS2Q9HD23 443 aa14.74□□□□□ -0.05
RPAIN-214ENST00000574003 ZNF277Q9NRM2 450 aaPredicted RBP14.74□□□□□ -0.05
RPAIN-214ENST00000574003 DICER1Q9UPY3 1922 aaKnown RBP14.74□□□□□ -0.05
RPAIN-214ENST00000574003 GLTPD2A6NH11 291 aa14.73□□□□□ -0.05
RPAIN-214ENST00000574003 CCDC93Q567U6 631 aa14.73□□□□□ -0.05
RPAIN-214ENST00000574003 NLRP10Q86W26 655 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms