RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 CLEC4GQ6UXB4 293 aa36.14■■■■□ 3.38
SCARF1-207ENST00000573867 NCBP3Q53F19 620 aaKnown RBP36.12■■■■□ 3.37
SCARF1-207ENST00000573867 SETDB2Q96T68 719 aa36.12■■■■□ 3.37
SCARF1-207ENST00000573867 MAP3K15Q6ZN16 1313 aa36.11■■■■□ 3.37
SCARF1-207ENST00000573867 CHRNA5P30532 468 aa36.11■■■■□ 3.37
SCARF1-207ENST00000573867 DUSP27Q5VZP5 1158 aa36.11■■■■□ 3.37
SCARF1-207ENST00000573867 CCDC24Q8N4L8 307 aa36.11■■■■□ 3.37
SCARF1-207ENST00000573867 BRCA1P38398 1863 aaKnown RBP36.11■■■■□ 3.37
SCARF1-207ENST00000573867 RGL2O15211 777 aa36.1■■■■□ 3.37
SCARF1-207ENST00000573867 PRR5LQ6MZQ0 368 aa36.1■■■■□ 3.37
SCARF1-207ENST00000573867 ZNF652Q9Y2D9 606 aa36.1■■■■□ 3.37
SCARF1-207ENST00000573867 SALL2Q9Y467 1007 aaPredicted RBP36.1■■■■□ 3.37
SCARF1-207ENST00000573867 HOXB7P09629 217 aa36.09■■■■□ 3.37
SCARF1-207ENST00000573867 ANKRD31Q8N7Z5 1873 aa36.07■■■■□ 3.37
SCARF1-207ENST00000573867 ERVV-1B6SEH8 477 aa36.07■■■■□ 3.36
SCARF1-207ENST00000573867 GRIN3BO60391 1043 aa36.07■■■■□ 3.36
SCARF1-207ENST00000573867 YY1P25490 414 aa36.07■■■■□ 3.36
SCARF1-207ENST00000573867 HDGFL1Q5TGJ6 251 aa36.07■■■■□ 3.36
SCARF1-207ENST00000573867 TSR2Q969E8 191 aaKnown RBP36.07■■■■□ 3.36
SCARF1-207ENST00000573867 ZBTB3Q9H5J0 574 aa36.07■■■■□ 3.36
SCARF1-207ENST00000573867 CHPF2Q9P2E5 772 aa36.07■■■■□ 3.36
SCARF1-207ENST00000573867 KIF6Q6ZMV9 814 aa36.06■■■■□ 3.36
SCARF1-207ENST00000573867 C8orf58Q8NAV2 365 aa36.06■■■■□ 3.36
SCARF1-207ENST00000573867 DDX21Q9NR30 783 aaKnown RBP eCLIP36.06■■■■□ 3.36
SCARF1-207ENST00000573867 NIP7Q9Y221 180 aaKnown RBP eCLIP36.06■■■■□ 3.36
SCARF1-207ENST00000573867 ELL2O00472 640 aaPredicted RBP36.04■■■■□ 3.36
SCARF1-207ENST00000573867 NUP98P52948 1817 aa36.04■■■■□ 3.36
SCARF1-207ENST00000573867 CNBD1Q8NA66 436 aa36.03■■■■□ 3.36
SCARF1-207ENST00000573867 BCS1LQ9Y276 419 aa36.03■■■■□ 3.36
SCARF1-207ENST00000573867 IL16Q14005 1332 aa36.03■■■■□ 3.36
SCARF1-207ENST00000573867 ATP10DQ9P241 1426 aa36.02■■■■□ 3.36
SCARF1-207ENST00000573867 XAGE3Q8WTP9 111 aa36.02■■■■□ 3.36
SCARF1-207ENST00000573867 CHD4Q14839 1912 aa36.01■■■■□ 3.36
SCARF1-207ENST00000573867 COPS6Q7L5N1 327 aa36.01■■■■□ 3.36
SCARF1-207ENST00000573867 TSPYL6Q8N831 410 aa36.01■■■■□ 3.36
SCARF1-207ENST00000573867 NBPF5PQ86XG9 351 aaPredicted RBP36■■■■□ 3.35
SCARF1-207ENST00000573867 PIM2Q9P1W9 311 aa36■■■■□ 3.35
SCARF1-207ENST00000573867 DLEC1Q9Y238 1755 aa35.99■■■■□ 3.35
SCARF1-207ENST00000573867 AIMP1Q12904 312 aaKnown RBP35.99■■■■□ 3.35
SCARF1-207ENST00000573867 BRIP1Q9BX63 1249 aa35.99■■■■□ 3.35
SCARF1-207ENST00000573867 UBN2Q6ZU65 1347 aa35.99■■■■□ 3.35
SCARF1-207ENST00000573867 COL11A2P13942 1736 aaPredicted RBP35.98■■■■□ 3.35
SCARF1-207ENST00000573867 FAM177BA6PVY3 158 aa35.98■■■■□ 3.35
SCARF1-207ENST00000573867 GIGYF2Q6Y7W6 1299 aaKnown RBP35.98■■■■□ 3.35
SCARF1-207ENST00000573867 C2CD5Q86YS7 1000 aa35.98■■■■□ 3.35
SCARF1-207ENST00000573867 GPTP24298 496 aa35.97■■■■□ 3.35
SCARF1-207ENST00000573867 DBF4Q9UBU7 674 aaPredicted RBP35.97■■■■□ 3.35
SCARF1-207ENST00000573867 CCER2I3L3R5 266 aa35.96■■■■□ 3.35
SCARF1-207ENST00000573867 WDR63Q8IWG1 891 aa35.96■■■■□ 3.35
SCARF1-207ENST00000573867 ZNF34Q8IZ26 560 aa35.96■■■■□ 3.35
SCARF1-207ENST00000573867 SPINK5Q9NQ38 1064 aaPredicted RBP35.96■■■■□ 3.35
SCARF1-207ENST00000573867 ST5P78524 1137 aa35.95■■■■□ 3.35
SCARF1-207ENST00000573867 DALRD3Q5D0E6 543 aaKnown RBP35.94■■■■□ 3.34
SCARF1-207ENST00000573867 FANCIQ9NVI1 1328 aa35.93■■■■□ 3.34
SCARF1-207ENST00000573867 ARFGEF1Q9Y6D6 1849 aa35.93■■■■□ 3.34
SCARF1-207ENST00000573867 NPHP1O15259 732 aa35.93■■■■□ 3.34
SCARF1-207ENST00000573867 H0YIN7 160 aa35.92■■■■□ 3.34
SCARF1-207ENST00000573867 PDE6BP35913 854 aa35.92■■■■□ 3.34
SCARF1-207ENST00000573867 SUSD4Q5VX71 490 aa35.91■■■■□ 3.34
SCARF1-207ENST00000573867 TPTE2Q6XPS3 522 aa35.91■■■■□ 3.34
SCARF1-207ENST00000573867 ABCC12Q96J65 1359 aa35.9■■■■□ 3.34
SCARF1-207ENST00000573867 ZNF521Q96K83 1311 aa35.89■■■■□ 3.34
SCARF1-207ENST00000573867 DIEXFQ68CQ4 756 aaKnown RBP35.89■■■■□ 3.34
SCARF1-207ENST00000573867 NUTM1Q86Y26 1132 aa35.89■■■■□ 3.34
SCARF1-207ENST00000573867 HYPKQ9NX55 129 aa35.89■■■■□ 3.34
SCARF1-207ENST00000573867 TNRC6CQ9HCJ0 1690 aaKnown RBP35.88■■■■□ 3.33
SCARF1-207ENST00000573867 IBTKQ9P2D0 1353 aaPredicted RBP35.88■■■■□ 3.33
SCARF1-207ENST00000573867 ANKRD36CQ5JPF3 1778 aa35.87■■■■□ 3.33
SCARF1-207ENST00000573867 PHAXQ9H814 394 aaKnown RBP35.87■■■■□ 3.33
SCARF1-207ENST00000573867 NTSR2O95665 410 aa35.86■■■■□ 3.33
SCARF1-207ENST00000573867 ERFEQ4G0M1 354 aa35.86■■■■□ 3.33
SCARF1-207ENST00000573867 TTLL6Q8N841 843 aa35.86■■■■□ 3.33
SCARF1-207ENST00000573867 KLRG2A4D1S0 409 aaPredicted RBP35.85■■■■□ 3.33
SCARF1-207ENST00000573867 SRGNP10124 158 aa35.85■■■■□ 3.33
SCARF1-207ENST00000573867 TWISTNBQ3B726 338 aaPredicted RBP35.85■■■■□ 3.33
SCARF1-207ENST00000573867 ARHGAP27Q6ZUM4 889 aa35.85■■■■□ 3.33
SCARF1-207ENST00000573867 PLBD2Q8NHP8 589 aa35.85■■■■□ 3.33
SCARF1-207ENST00000573867 ZNF622Q969S3 477 aaKnown RBP eCLIP35.85■■■■□ 3.33
SCARF1-207ENST00000573867 NYXQ9GZU5 481 aa35.85■■■■□ 3.33
SCARF1-207ENST00000573867 PDZRN3Q9UPQ7 1066 aa35.85■■■■□ 3.33
SCARF1-207ENST00000573867 CCDC30Q5VVM6 783 aa35.84■■■■□ 3.33
SCARF1-207ENST00000573867 ANKRD13DQ6ZTN6 518 aa35.84■■■■□ 3.33
SCARF1-207ENST00000573867 TCERG1O14776 1098 aaKnown RBP35.83■■■■□ 3.33
SCARF1-207ENST00000573867 TCIRG1Q13488 830 aa35.83■■■■□ 3.33
SCARF1-207ENST00000573867 MIER1Q8N108 512 aa35.83■■■■□ 3.33
SCARF1-207ENST00000573867 PARP10Q53GL7 1025 aa35.82■■■■□ 3.32
SCARF1-207ENST00000573867 GTF2E1P29083 439 aaPredicted RBP35.81■■■■□ 3.32
SCARF1-207ENST00000573867 EXOSC9Q06265 439 aaKnown RBP35.81■■■■□ 3.32
SCARF1-207ENST00000573867 HSP90AB3PQ58FF7 597 aa35.81■■■■□ 3.32
SCARF1-207ENST00000573867 NLRP10Q86W26 655 aa35.81■■■■□ 3.32
SCARF1-207ENST00000573867 ZNF784Q8NCA9 323 aaPredicted RBP35.81■■■■□ 3.32
SCARF1-207ENST00000573867 ARFGEF2Q9Y6D5 1785 aa35.8■■■■□ 3.32
SCARF1-207ENST00000573867 STYK1Q6J9G0 422 aa35.8■■■■□ 3.32
SCARF1-207ENST00000573867 ADCY9O60503 1353 aa35.79■■■■□ 3.32
SCARF1-207ENST00000573867 MASTLQ96GX5 879 aa35.79■■■■□ 3.32
SCARF1-207ENST00000573867 RIC1Q4ADV7 1423 aa35.79■■■■□ 3.32
SCARF1-207ENST00000573867 ZNF428Q96B54 188 aa35.78■■■■□ 3.32
SCARF1-207ENST00000573867 GOLGA2Q08379 1002 aa35.77■■■■□ 3.32
SCARF1-207ENST00000573867 PPP1R42Q7Z4L9 355 aa35.77■■■■□ 3.32
SCARF1-207ENST00000573867 ISCA1Q9BUE6 129 aa35.77■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms