RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 TTC41PQ6P2S7 1318 aa22.91■■□□□ 1.26
SCARF1-206ENST00000573852 GLRX3O76003 335 aaKnown RBP22.91■■□□□ 1.26
SCARF1-206ENST00000573852 UVSSAQ2YD98 709 aa22.91■■□□□ 1.26
SCARF1-206ENST00000573852 ADCY9O60503 1353 aa22.91■■□□□ 1.26
SCARF1-206ENST00000573852 USP54Q70EL1 1684 aa22.91■■□□□ 1.26
SCARF1-206ENST00000573852 MED1Q15648 1581 aaPredicted RBP22.91■■□□□ 1.26
SCARF1-206ENST00000573852 HOXB7P09629 217 aa22.91■■□□□ 1.26
SCARF1-206ENST00000573852 UBE2HP62256 183 aa22.91■■□□□ 1.26
SCARF1-206ENST00000573852 USP25Q9UHP3 1055 aa22.91■■□□□ 1.26
SCARF1-206ENST00000573852 ADCK5Q3MIX3 580 aa22.9■■□□□ 1.26
SCARF1-206ENST00000573852 DIAPH3Q9NSV4 1193 aa22.9■■□□□ 1.26
SCARF1-206ENST00000573852 SETD1BQ9UPS6 1966 aaKnown RBP22.9■■□□□ 1.26
SCARF1-206ENST00000573852 FAM13BQ9NYF5 915 aa22.9■■□□□ 1.26
SCARF1-206ENST00000573852 FIBPO43427 364 aa22.89■■□□□ 1.26
SCARF1-206ENST00000573852 KCNA6P17658 529 aa22.89■■□□□ 1.26
SCARF1-206ENST00000573852 CCDC83Q8IWF9 413 aa22.89■■□□□ 1.26
SCARF1-206ENST00000573852 KDM3BQ7LBC6 1761 aa22.89■■□□□ 1.26
SCARF1-206ENST00000573852 HCLS1P14317 486 aaPredicted RBP22.89■■□□□ 1.25
SCARF1-206ENST00000573852 KIAA2012Q0VF49 1180 aa22.89■■□□□ 1.25
SCARF1-206ENST00000573852 LTN1O94822 1766 aa22.88■■□□□ 1.25
SCARF1-206ENST00000573852 IP6K1Q92551 441 aa22.88■■□□□ 1.25
SCARF1-206ENST00000573852 ZNF830Q96NB3 372 aaPredicted RBP22.88■■□□□ 1.25
SCARF1-206ENST00000573852 GJB2P29033 226 aa22.88■■□□□ 1.25
SCARF1-206ENST00000573852 MTX1Q13505 466 aa22.88■■□□□ 1.25
SCARF1-206ENST00000573852 PRPF40BQ6NWY9 871 aaKnown RBP22.88■■□□□ 1.25
SCARF1-206ENST00000573852 CLASRPQ8N2M8 674 aaKnown RBP22.88■■□□□ 1.25
SCARF1-206ENST00000573852 JAKMIP1Q96N16 626 aaKnown RBP22.88■■□□□ 1.25
SCARF1-206ENST00000573852 SASS6Q6UVJ0 657 aa22.87■■□□□ 1.25
SCARF1-206ENST00000573852 PDRG1Q9NUG6 133 aa22.87■■□□□ 1.25
SCARF1-206ENST00000573852 LETM1O95202 739 aaPredicted RBP22.87■■□□□ 1.25
SCARF1-206ENST00000573852 RUFY2Q8WXA3 655 aa22.87■■□□□ 1.25
SCARF1-206ENST00000573852 PA2G4Q9UQ80 394 aaKnown RBP22.87■■□□□ 1.25
SCARF1-206ENST00000573852 BTBD11A6QL63 1104 aa22.86■■□□□ 1.25
SCARF1-206ENST00000573852 ADCY5O95622 1261 aa22.86■■□□□ 1.25
SCARF1-206ENST00000573852 ECHDC1Q9NTX5 307 aa22.86■■□□□ 1.25
SCARF1-206ENST00000573852 MTMR6Q9Y217 621 aa22.86■■□□□ 1.25
SCARF1-206ENST00000573852 VPS53Q5VIR6 699 aa22.86■■□□□ 1.25
SCARF1-206ENST00000573852 ZSWIM6Q9HCJ5 1215 aa22.86■■□□□ 1.25
SCARF1-206ENST00000573852 ATP6V1DQ9Y5K8 247 aa22.86■■□□□ 1.25
SCARF1-206ENST00000573852 DNM1Q05193 864 aaKnown RBP22.85■■□□□ 1.25
SCARF1-206ENST00000573852 DDX54Q8TDD1 881 aaKnown RBP22.85■■□□□ 1.25
SCARF1-206ENST00000573852 TEFQ10587 303 aa22.85■■□□□ 1.25
SCARF1-206ENST00000573852 ST3GAL1Q11201 340 aa22.85■■□□□ 1.25
SCARF1-206ENST00000573852 MPRIPQ6WCQ1 1025 aa22.85■■□□□ 1.25
SCARF1-206ENST00000573852 KCNB2Q92953 911 aa22.85■■□□□ 1.25
SCARF1-206ENST00000573852 MAP3K2Q9Y2U5 619 aa22.85■■□□□ 1.25
SCARF1-206ENST00000573852 CYP46A1Q9Y6A2 500 aa22.84■■□□□ 1.25
SCARF1-206ENST00000573852 PROSER3Q2NL68 480 aa22.84■■□□□ 1.25
SCARF1-206ENST00000573852 GIMAP6Q6P9H5 292 aa22.84■■□□□ 1.25
SCARF1-206ENST00000573852 FUCA2Q9BTY2 467 aa22.84■■□□□ 1.25
SCARF1-206ENST00000573852 TM6SF1Q9BZW5 370 aa22.84■■□□□ 1.25
SCARF1-206ENST00000573852 C9orf78Q9NZ63 289 aaPredicted RBP22.84■■□□□ 1.25
SCARF1-206ENST00000573852 ZBTB7CA1YPR0 619 aa22.83■■□□□ 1.25
SCARF1-206ENST00000573852 DYNC1I1O14576 645 aa22.83■■□□□ 1.25
SCARF1-206ENST00000573852 IFIT2P09913 472 aaKnown RBP22.83■■□□□ 1.25
SCARF1-206ENST00000573852 NECTIN1Q15223 517 aa22.83■■□□□ 1.25
SCARF1-206ENST00000573852 CHMP4AQ9BY43 222 aa22.83■■□□□ 1.25
SCARF1-206ENST00000573852 DBF4Q9UBU7 674 aaPredicted RBP22.83■■□□□ 1.25
SCARF1-206ENST00000573852 ME3Q16798 604 aa22.83■■□□□ 1.24
SCARF1-206ENST00000573852 ZNF530Q6P9A1 599 aaPredicted RBP22.83■■□□□ 1.24
SCARF1-206ENST00000573852 ZSCAN31Q96LW9 406 aaPredicted RBP22.83■■□□□ 1.24
SCARF1-206ENST00000573852 CWF19L2Q2TBE0 894 aaKnown RBP22.82■■□□□ 1.24
SCARF1-206ENST00000573852 THEMISQ8N1K5 641 aaPredicted RBP22.82■■□□□ 1.24
SCARF1-206ENST00000573852 LRRC59Q96AG4 307 aaKnown RBP22.82■■□□□ 1.24
SCARF1-206ENST00000573852 TTC12Q9H892 705 aaPredicted RBP22.82■■□□□ 1.24
SCARF1-206ENST00000573852 RGPD2P0DJD1 1756 aa22.82■■□□□ 1.24
SCARF1-206ENST00000573852 AKAP4Q5JQC9 854 aa22.82■■□□□ 1.24
SCARF1-206ENST00000573852 NECAB1Q8N987 351 aa22.82■■□□□ 1.24
SCARF1-206ENST00000573852 SH2B1Q9NRF2 756 aaPredicted RBP22.82■■□□□ 1.24
SCARF1-206ENST00000573852 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.82■■□□□ 1.24
SCARF1-206ENST00000573852 CCDC171Q6TFL3 1326 aa22.81■■□□□ 1.24
SCARF1-206ENST00000573852 KDM4AO75164 1064 aa22.81■■□□□ 1.24
SCARF1-206ENST00000573852 PHF8Q9UPP1 1060 aa22.81■■□□□ 1.24
SCARF1-206ENST00000573852 COL9A3Q14050 684 aaPredicted RBP22.81■■□□□ 1.24
SCARF1-206ENST00000573852 AACSQ86V21 672 aa22.81■■□□□ 1.24
SCARF1-206ENST00000573852 PIBF1Q8WXW3 757 aa22.81■■□□□ 1.24
SCARF1-206ENST00000573852 EVI5LQ96CN4 794 aa22.81■■□□□ 1.24
SCARF1-206ENST00000573852 GPATCH3Q96I76 525 aa22.81■■□□□ 1.24
SCARF1-206ENST00000573852 ALDH1L1O75891 902 aa22.8■■□□□ 1.24
SCARF1-206ENST00000573852 RBM8AQ9Y5S9 174 aaKnown RBP22.8■■□□□ 1.24
SCARF1-206ENST00000573852 NFAT5O94916 1531 aa22.8■■□□□ 1.24
SCARF1-206ENST00000573852 VPS37CA5D8V6 355 aaPredicted RBP22.8■■□□□ 1.24
SCARF1-206ENST00000573852 FAM227BQ96M60 508 aa22.8■■□□□ 1.24
SCARF1-206ENST00000573852 KSR2Q6VAB6 950 aa22.79■■□□□ 1.24
SCARF1-206ENST00000573852 ERC1Q8IUD2 1116 aa22.79■■□□□ 1.24
SCARF1-206ENST00000573852 TPCN1Q9ULQ1 816 aa22.79■■□□□ 1.24
SCARF1-206ENST00000573852 LMO7Q8WWI1 1683 aa22.79■■□□□ 1.24
SCARF1-206ENST00000573852 PRAMEF22A3QJZ6 481 aa22.79■■□□□ 1.24
SCARF1-206ENST00000573852 CREB3L3Q68CJ9 461 aa22.79■■□□□ 1.24
SCARF1-206ENST00000573852 C17orf53Q8N3J3 647 aaPredicted RBP22.79■■□□□ 1.24
SCARF1-206ENST00000573852 MAP7D2Q96T17 732 aa22.79■■□□□ 1.24
SCARF1-206ENST00000573852 AP5Z1O43299 807 aa22.78■■□□□ 1.24
SCARF1-206ENST00000573852 NOLC1Q14978 699 aaKnown RBP eCLIP22.78■■□□□ 1.24
SCARF1-206ENST00000573852 GIGYF1O75420 1035 aaPredicted RBP22.78■■□□□ 1.24
SCARF1-206ENST00000573852 SASH1O94885 1247 aa22.78■■□□□ 1.24
SCARF1-206ENST00000573852 NMIQ13287 307 aaPredicted RBP22.78■■□□□ 1.24
SCARF1-206ENST00000573852 DNTTIP2Q5QJE6 756 aaKnown RBP22.78■■□□□ 1.24
SCARF1-206ENST00000573852 RNMTO43148 476 aaKnown RBP22.77■■□□□ 1.24
SCARF1-206ENST00000573852 ZKSCAN1P17029 563 aaPredicted RBP22.77■■□□□ 1.24
SCARF1-206ENST00000573852 MAP4K1Q92918 833 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms