RNA–Protein interactions for RNA: ENST00000573559.3

ABR-221, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-221ENST00000573559 SERPINB2P05120 415 aa27.36■■□□□ 1.97
ABR-221ENST00000573559 PELP1Q8IZL8 1130 aaKnown RBP27.36■■□□□ 1.97
ABR-221ENST00000573559 ZBTB3Q9H5J0 574 aa27.36■■□□□ 1.97
ABR-221ENST00000573559 DDX21Q9NR30 783 aaKnown RBP eCLIP27.36■■□□□ 1.97
ABR-221ENST00000573559 MAP3K15Q6ZN16 1313 aa27.36■■□□□ 1.97
ABR-221ENST00000573559 CARMIL3Q8ND23 1372 aa27.35■■□□□ 1.97
ABR-221ENST00000573559 NUP98P52948 1817 aa27.35■■□□□ 1.97
ABR-221ENST00000573559 CLEC4GQ6UXB4 293 aa27.35■■□□□ 1.97
ABR-221ENST00000573559 TSPYL6Q8N831 410 aa27.35■■□□□ 1.97
ABR-221ENST00000573559 SETDB2Q96T68 719 aa27.35■■□□□ 1.97
ABR-221ENST00000573559 AIMP1Q12904 312 aaKnown RBP27.34■■□□□ 1.97
ABR-221ENST00000573559 HLFQ16534 295 aa27.34■■□□□ 1.97
ABR-221ENST00000573559 LRP10Q7Z4F1 713 aa27.34■■□□□ 1.97
ABR-221ENST00000573559 DBF4Q9UBU7 674 aaPredicted RBP27.34■■□□□ 1.97
ABR-221ENST00000573559 N4BP2Q86UW6 1770 aaPredicted RBP27.34■■□□□ 1.97
ABR-221ENST00000573559 SPINK5Q9NQ38 1064 aaPredicted RBP27.33■■□□□ 1.97
ABR-221ENST00000573559 ERVV-1B6SEH8 477 aa27.32■■□□□ 1.96
ABR-221ENST00000573559 NPHP1O15259 732 aa27.32■■□□□ 1.96
ABR-221ENST00000573559 COPS6Q7L5N1 327 aa27.32■■□□□ 1.96
ABR-221ENST00000573559 XAGE3Q8WTP9 111 aa27.32■■□□□ 1.96
ABR-221ENST00000573559 MYH16Q9H6N6 1097 aa27.32■■□□□ 1.96
ABR-221ENST00000573559 NIP7Q9Y221 180 aaKnown RBP eCLIP27.32■■□□□ 1.96
ABR-221ENST00000573559 ZNF521Q96K83 1311 aa27.32■■□□□ 1.96
ABR-221ENST00000573559 KIAA1551Q9HCM1 1747 aa27.32■■□□□ 1.96
ABR-221ENST00000573559 PXDNLA1KZ92 1463 aa27.32■■□□□ 1.96
ABR-221ENST00000573559 RGL2O15211 777 aa27.31■■□□□ 1.96
ABR-221ENST00000573559 GOLGA2Q08379 1002 aa27.31■■□□□ 1.96
ABR-221ENST00000573559 TWISTNBQ3B726 338 aaPredicted RBP27.31■■□□□ 1.96
ABR-221ENST00000573559 WWC3Q9ULE0 1092 aa27.31■■□□□ 1.96
ABR-221ENST00000573559 GPR162Q16538 588 aa27.29■■□□□ 1.96
ABR-221ENST00000573559 CCDC30Q5VVM6 783 aa27.29■■□□□ 1.96
ABR-221ENST00000573559 CHMP4AQ9BY43 222 aa27.29■■□□□ 1.96
ABR-221ENST00000573559 HYPKQ9NX55 129 aa27.29■■□□□ 1.96
ABR-221ENST00000573559 TGFB2P61812 414 aa27.28■■□□□ 1.96
ABR-221ENST00000573559 CNBD1Q8NA66 436 aa27.28■■□□□ 1.96
ABR-221ENST00000573559 ATP10DQ9P241 1426 aa27.27■■□□□ 1.96
ABR-221ENST00000573559 FAM177BA6PVY3 158 aa27.27■■□□□ 1.96
ABR-221ENST00000573559 EXOSC9Q06265 439 aaKnown RBP27.27■■□□□ 1.96
ABR-221ENST00000573559 A0A0G2JLW4 131 aa27.26■■□□□ 1.95
ABR-221ENST00000573559 GPTP24298 496 aa27.26■■□□□ 1.95
ABR-221ENST00000573559 PRR5LQ6MZQ0 368 aa27.26■■□□□ 1.95
ABR-221ENST00000573559 GIGYF2Q6Y7W6 1299 aaKnown RBP27.26■■□□□ 1.95
ABR-221ENST00000573559 NBPF5PQ86XG9 351 aaPredicted RBP27.26■■□□□ 1.95
ABR-221ENST00000573559 CCDC24Q8N4L8 307 aa27.26■■□□□ 1.95
ABR-221ENST00000573559 ANKRD36CQ5JPF3 1778 aa27.25■■□□□ 1.95
ABR-221ENST00000573559 TCERG1O14776 1098 aaKnown RBP27.25■■□□□ 1.95
ABR-221ENST00000573559 DPEP1P16444 411 aa27.25■■□□□ 1.95
ABR-221ENST00000573559 ANKRD31Q8N7Z5 1873 aa27.24■■□□□ 1.95
ABR-221ENST00000573559 ST5P78524 1137 aa27.24■■□□□ 1.95
ABR-221ENST00000573559 STK31Q9BXU1 1019 aa27.24■■□□□ 1.95
ABR-221ENST00000573559 PHAXQ9H814 394 aaKnown RBP27.23■■□□□ 1.95
ABR-221ENST00000573559 ARFGEF2Q9Y6D5 1785 aa27.22■■□□□ 1.95
ABR-221ENST00000573559 E9PSI1 815 aa27.22■■□□□ 1.95
ABR-221ENST00000573559 CHRNA5P30532 468 aa27.22■■□□□ 1.95
ABR-221ENST00000573559 BRCA1P38398 1863 aaKnown RBP27.21■■□□□ 1.95
ABR-221ENST00000573559 UBN2Q6ZU65 1347 aa27.21■■□□□ 1.95
ABR-221ENST00000573559 YBX3P16989 372 aaKnown RBP eCLIP27.21■■□□□ 1.95
ABR-221ENST00000573559 GTF2E1P29083 439 aaPredicted RBP27.2■■□□□ 1.94
ABR-221ENST00000573559 HSP90AB3PQ58FF7 597 aa27.2■■□□□ 1.94
ABR-221ENST00000573559 TPTE2Q6XPS3 522 aa27.2■■□□□ 1.94
ABR-221ENST00000573559 ANKRD13DQ6ZTN6 518 aa27.2■■□□□ 1.94
ABR-221ENST00000573559 PLBD2Q8NHP8 589 aa27.2■■□□□ 1.94
ABR-221ENST00000573559 ZNF34Q8IZ26 560 aa27.19■■□□□ 1.94
ABR-221ENST00000573559 NYXQ9GZU5 481 aa27.19■■□□□ 1.94
ABR-221ENST00000573559 DLEC1Q9Y238 1755 aa27.19■■□□□ 1.94
ABR-221ENST00000573559 VAMP4O75379 141 aa27.18■■□□□ 1.94
ABR-221ENST00000573559 C2CD5Q86YS7 1000 aa27.18■■□□□ 1.94
ABR-221ENST00000573559 BRIP1Q9BX63 1249 aa27.18■■□□□ 1.94
ABR-221ENST00000573559 COL11A2P13942 1736 aaPredicted RBP27.18■■□□□ 1.94
ABR-221ENST00000573559 PDE6BP35913 854 aa27.17■■□□□ 1.94
ABR-221ENST00000573559 HNRNPUQ00839 825 aaKnown RBP eCLIP27.17■■□□□ 1.94
ABR-221ENST00000573559 SLFN5Q08AF3 891 aa27.17■■□□□ 1.94
ABR-221ENST00000573559 RIC3Q7Z5B4 369 aa27.17■■□□□ 1.94
ABR-221ENST00000573559 CDCA7LQ96GN5 454 aa27.17■■□□□ 1.94
ABR-221ENST00000573559 BCS1LQ9Y276 419 aa27.17■■□□□ 1.94
ABR-221ENST00000573559 KCNA3P22001 575 aa27.16■■□□□ 1.94
ABR-221ENST00000573559 TCIRG1Q13488 830 aa27.16■■□□□ 1.94
ABR-221ENST00000573559 PARP10Q53GL7 1025 aa27.16■■□□□ 1.94
ABR-221ENST00000573559 SUSD4Q5VX71 490 aa27.16■■□□□ 1.94
ABR-221ENST00000573559 NUTM1Q86Y26 1132 aa27.16■■□□□ 1.94
ABR-221ENST00000573559 PIM2Q9P1W9 311 aa27.16■■□□□ 1.94
ABR-221ENST00000573559 IBTKQ9P2D0 1353 aaPredicted RBP27.16■■□□□ 1.94
ABR-221ENST00000573559 CACNA1FO60840 1977 aa27.15■■□□□ 1.94
ABR-221ENST00000573559 H0YIN7 160 aa27.15■■□□□ 1.94
ABR-221ENST00000573559 DDX58O95786 925 aaKnown RBP27.15■■□□□ 1.94
ABR-221ENST00000573559 SLC4A2P04920 1241 aa27.15■■□□□ 1.94
ABR-221ENST00000573559 PPP1R42Q7Z4L9 355 aa27.15■■□□□ 1.94
ABR-221ENST00000573559 ABCC12Q96J65 1359 aa27.14■■□□□ 1.94
ABR-221ENST00000573559 GRIN3BO60391 1043 aa27.14■■□□□ 1.94
ABR-221ENST00000573559 TNRC6CQ9HCJ0 1690 aaKnown RBP27.13■■□□□ 1.93
ABR-221ENST00000573559 NTSR2O95665 410 aa27.12■■□□□ 1.93
ABR-221ENST00000573559 ERFEQ4G0M1 354 aa27.12■■□□□ 1.93
ABR-221ENST00000573559 G2E3Q7L622 706 aa27.12■■□□□ 1.93
ABR-221ENST00000573559 NLRP10Q86W26 655 aa27.12■■□□□ 1.93
ABR-221ENST00000573559 ZNF428Q96B54 188 aa27.12■■□□□ 1.93
ABR-221ENST00000573559 UTP14AQ9BVJ6 771 aaKnown RBP27.12■■□□□ 1.93
ABR-221ENST00000573559 ARFGEF1Q9Y6D6 1849 aa27.11■■□□□ 1.93
ABR-221ENST00000573559 GOLGB1Q14789 3259 aaKnown RBP27.11■■□□□ 1.93
ABR-221ENST00000573559 ATP5J2-PTCD1G3V325 749 aa27.11■■□□□ 1.93
ABR-221ENST00000573559 DALRD3Q5D0E6 543 aaKnown RBP27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms