RNA–Protein interactions for RNA: ENST00000572988.1

NCBP3-202, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 3

Gene NCBP3, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-202ENST00000572988 SUPT6HQ7KZ85 1726 aaKnown RBP7.46□□□□□ -1.22
NCBP3-202ENST00000572988 SOS2Q07890 1332 aaPredicted RBP7.46□□□□□ -1.22
NCBP3-202ENST00000572988 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.46□□□□□ -1.22
NCBP3-202ENST00000572988 PREX1Q8TCU6 1659 aa7.45□□□□□ -1.22
NCBP3-202ENST00000572988 CAMSAP2Q08AD1 1489 aa7.45□□□□□ -1.22
NCBP3-202ENST00000572988 CCDC141Q6ZP82 1450 aa7.45□□□□□ -1.22
NCBP3-202ENST00000572988 A0A1W2PRU2 124 aa7.45□□□□□ -1.22
NCBP3-202ENST00000572988 ANKLE2Q86XL3 938 aa7.45□□□□□ -1.22
NCBP3-202ENST00000572988 KDF1Q8NAX2 398 aaPredicted RBP7.45□□□□□ -1.22
NCBP3-202ENST00000572988 ZSCAN1Q8NBB4 408 aa7.45□□□□□ -1.22
NCBP3-202ENST00000572988 NLRP3Q96P20 1036 aa7.45□□□□□ -1.22
NCBP3-202ENST00000572988 CHIC2Q9UKJ5 165 aa7.45□□□□□ -1.22
NCBP3-202ENST00000572988 CAMSAP1Q5T5Y3 1602 aa7.45□□□□□ -1.22
NCBP3-202ENST00000572988 MIA2Q96PC5 1412 aa7.44□□□□□ -1.22
NCBP3-202ENST00000572988 RRBP1Q9P2E9 1410 aaKnown RBP7.44□□□□□ -1.22
NCBP3-202ENST00000572988 UBAP1LF5GYI3 381 aa7.44□□□□□ -1.22
NCBP3-202ENST00000572988 H3BM21 787 aa7.44□□□□□ -1.22
NCBP3-202ENST00000572988 ITGAEP38570 1179 aa7.44□□□□□ -1.22
NCBP3-202ENST00000572988 EML3Q32P44 896 aa7.44□□□□□ -1.22
NCBP3-202ENST00000572988 ARHGEF10LQ9HCE6 1279 aa7.44□□□□□ -1.22
NCBP3-202ENST00000572988 RAB6BQ9NRW1 208 aa7.44□□□□□ -1.22
NCBP3-202ENST00000572988 DNMT3LQ9UJW3 386 aa7.44□□□□□ -1.22
NCBP3-202ENST00000572988 INO80Q9ULG1 1556 aaPredicted RBP7.44□□□□□ -1.22
NCBP3-202ENST00000572988 TNRQ92752 1358 aa7.44□□□□□ -1.22
NCBP3-202ENST00000572988 PLXNC1O60486 1568 aa7.43□□□□□ -1.22
NCBP3-202ENST00000572988 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.43□□□□□ -1.22
NCBP3-202ENST00000572988 NPAS3Q8IXF0 933 aa7.43□□□□□ -1.22
NCBP3-202ENST00000572988 DEPDC4Q8N2C3 294 aa7.43□□□□□ -1.22
NCBP3-202ENST00000572988 LTBP4Q8N2S1 1624 aa7.42□□□□□ -1.22
NCBP3-202ENST00000572988 CLTCQ00610 1675 aaKnown RBP7.42□□□□□ -1.22
NCBP3-202ENST00000572988 GNRH1P01148 92 aa7.42□□□□□ -1.22
NCBP3-202ENST00000572988 SLC27A3Q5K4L6 730 aa7.42□□□□□ -1.22
NCBP3-202ENST00000572988 TBC1D9Q6ZT07 1266 aa7.42□□□□□ -1.22
NCBP3-202ENST00000572988 C14orf37Q86TY3 774 aa7.42□□□□□ -1.22
NCBP3-202ENST00000572988 NFATC2IPQ8NCF5 419 aa7.42□□□□□ -1.22
NCBP3-202ENST00000572988 NOD1Q9Y239 953 aa7.42□□□□□ -1.22
NCBP3-202ENST00000572988 ABCC5O15440 1437 aa7.42□□□□□ -1.22
NCBP3-202ENST00000572988 MYOM3Q5VTT5 1437 aa7.42□□□□□ -1.22
NCBP3-202ENST00000572988 LOC100996750A0A140TA64 210 aa7.41□□□□□ -1.22
NCBP3-202ENST00000572988 FAM181BA6NEQ2 426 aa7.41□□□□□ -1.22
NCBP3-202ENST00000572988 USP17L5A8MUK1 530 aa7.41□□□□□ -1.22
NCBP3-202ENST00000572988 ATP9BO43861 1147 aa7.41□□□□□ -1.22
NCBP3-202ENST00000572988 LZTS3O60299 673 aaPredicted RBP7.41□□□□□ -1.22
NCBP3-202ENST00000572988 NCOA4Q13772 614 aa7.41□□□□□ -1.22
NCBP3-202ENST00000572988 ILDR2Q71H61 639 aa7.41□□□□□ -1.22
NCBP3-202ENST00000572988 PRICKLE2Q7Z3G6 844 aa7.41□□□□□ -1.22
NCBP3-202ENST00000572988 KRTAP4-6Q9BYQ5 205 aa7.41□□□□□ -1.22
NCBP3-202ENST00000572988 A2ML1A8K2U0 1454 aa7.41□□□□□ -1.22
NCBP3-202ENST00000572988 LTKP29376 864 aa7.4□□□□□ -1.22
NCBP3-202ENST00000572988 PIP4K2BP78356 416 aa7.4□□□□□ -1.22
NCBP3-202ENST00000572988 PSME1Q06323 249 aa7.4□□□□□ -1.22
NCBP3-202ENST00000572988 CLN3Q13286 438 aa7.4□□□□□ -1.22
NCBP3-202ENST00000572988 ESCO1Q5FWF5 840 aa7.4□□□□□ -1.22
NCBP3-202ENST00000572988 FOXD4L5Q5VV16 416 aaPredicted RBP7.4□□□□□ -1.22
NCBP3-202ENST00000572988 LYSMD3Q7Z3D4 306 aa7.4□□□□□ -1.22
NCBP3-202ENST00000572988 TXNDC2Q86VQ3 553 aa7.4□□□□□ -1.22
NCBP3-202ENST00000572988 RNF217Q8TC41 542 aa7.4□□□□□ -1.22
NCBP3-202ENST00000572988 UCN2Q96RP3 112 aa7.4□□□□□ -1.22
NCBP3-202ENST00000572988 TFIP11Q9UBB9 837 aaKnown RBP7.4□□□□□ -1.22
NCBP3-202ENST00000572988 TCOF1Q13428 1488 aaKnown RBP7.4□□□□□ -1.22
NCBP3-202ENST00000572988 MROH2AA6NES4 1674 aa7.39□□□□□ -1.23
NCBP3-202ENST00000572988 ADGBQ8N7X0 1667 aa7.39□□□□□ -1.23
NCBP3-202ENST00000572988 ARHGEF5Q12774 1597 aa7.39□□□□□ -1.23
NCBP3-202ENST00000572988 PZPP20742 1482 aa7.39□□□□□ -1.23
NCBP3-202ENST00000572988 PLA2R1Q13018 1463 aa7.39□□□□□ -1.23
NCBP3-202ENST00000572988 DISP3Q9P2K9 1392 aa7.39□□□□□ -1.23
NCBP3-202ENST00000572988 USP17L3A6NCW0 530 aa7.39□□□□□ -1.23
NCBP3-202ENST00000572988 USP17L4A6NCW7 530 aa7.39□□□□□ -1.23
NCBP3-202ENST00000572988 STAU1O95793 577 aaKnown RBP7.39□□□□□ -1.23
NCBP3-202ENST00000572988 RNF144AP50876 292 aaPredicted RBP7.39□□□□□ -1.23
NCBP3-202ENST00000572988 IDI1Q13907 227 aa7.39□□□□□ -1.23
NCBP3-202ENST00000572988 USP17L2Q6R6M4 530 aa7.39□□□□□ -1.23
NCBP3-202ENST00000572988 USP17L1Q7RTZ2 530 aa7.39□□□□□ -1.23
NCBP3-202ENST00000572988 CNKSR1Q969H4 720 aa7.39□□□□□ -1.23
NCBP3-202ENST00000572988 ESYT1Q9BSJ8 1104 aa7.39□□□□□ -1.23
NCBP3-202ENST00000572988 CEP170BQ9Y4F5 1589 aaPredicted RBP7.38□□□□□ -1.23
NCBP3-202ENST00000572988 KIF15Q9NS87 1388 aa7.38□□□□□ -1.23
NCBP3-202ENST00000572988 TOM1O60784 492 aa7.38□□□□□ -1.23
NCBP3-202ENST00000572988 IL2RAP01589 272 aa7.38□□□□□ -1.23
NCBP3-202ENST00000572988 RHOQP17081 205 aa7.38□□□□□ -1.23
NCBP3-202ENST00000572988 GTF2E1P29083 439 aaPredicted RBP7.38□□□□□ -1.23
NCBP3-202ENST00000572988 PTSQ03393 145 aa7.38□□□□□ -1.23
NCBP3-202ENST00000572988 TIMELESSQ9UNS1 1208 aa7.38□□□□□ -1.23
NCBP3-202ENST00000572988 DNMT1P26358 1616 aaKnown RBP7.38□□□□□ -1.23
NCBP3-202ENST00000572988 SETD5Q9C0A6 1442 aa7.37□□□□□ -1.23
NCBP3-202ENST00000572988 PALM3A6NDB9 673 aaPredicted RBP7.37□□□□□ -1.23
NCBP3-202ENST00000572988 HSPA1LP34931 641 aa7.37□□□□□ -1.23
NCBP3-202ENST00000572988 GPC1P35052 558 aa7.37□□□□□ -1.23
NCBP3-202ENST00000572988 GDF10P55107 478 aa7.37□□□□□ -1.23
NCBP3-202ENST00000572988 GTF2IP78347 998 aa7.37□□□□□ -1.23
NCBP3-202ENST00000572988 CENPCQ03188 943 aa7.37□□□□□ -1.23
NCBP3-202ENST00000572988 TRIM50Q86XT4 487 aa7.37□□□□□ -1.23
NCBP3-202ENST00000572988 XAGE2Q96GT9 111 aa7.37□□□□□ -1.23
NCBP3-202ENST00000572988 PPP1R12CQ9BZL4 782 aa7.37□□□□□ -1.23
NCBP3-202ENST00000572988 ETNK1Q9HBU6 452 aa7.37□□□□□ -1.23
NCBP3-202ENST00000572988 MKRN1Q9UHC7 482 aaKnown RBP7.37□□□□□ -1.23
NCBP3-202ENST00000572988 KDM5DQ9BY66 1539 aa7.37□□□□□ -1.23
NCBP3-202ENST00000572988 FGD6Q6ZV73 1430 aa7.36□□□□□ -1.23
NCBP3-202ENST00000572988 POU4F2Q12837 409 aa7.36□□□□□ -1.23
NCBP3-202ENST00000572988 TMEM214Q6NUQ4 689 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms