RNA–Protein interactions for RNA: ENST00000572543.5

CAMTA2-208, Transcript of calmodulin binding transcription activator 2, human

APPRIS ALT2 TSL 5 BASIC

Gene CAMTA2, Length 4,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAMTA2-208	ENST00000572543	DBF4	Q9UBU7	674 aa	Predicted RBP	13.76	□□□□□ -0.21
CAMTA2-208	ENST00000572543	IPO7	O95373	1038 aa	Known RBP	13.76	□□□□□ -0.21
CAMTA2-208	ENST00000572543	NOM1	Q5C9Z4	860 aa	Known RBP	13.76	□□□□□ -0.21
CAMTA2-208	ENST00000572543	NECAB1	Q8N987	351 aa		13.76	□□□□□ -0.21
CAMTA2-208	ENST00000572543	KIAA0232	Q92628	1395 aa		13.76	□□□□□ -0.21
CAMTA2-208	ENST00000572543	PES1	O00541	588 aa	Known RBP	13.76	□□□□□ -0.21
CAMTA2-208	ENST00000572543	DACT1	Q9NYF0	836 aa		13.76	□□□□□ -0.21
CAMTA2-208	ENST00000572543	NPHP3	Q7Z494	1330 aa		13.76	□□□□□ -0.21
CAMTA2-208	ENST00000572543	SSH2	Q76I76	1423 aa		13.76	□□□□□ -0.21
CAMTA2-208	ENST00000572543	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.75	□□□□□ -0.21
CAMTA2-208	ENST00000572543	TET3	O43151	1660 aa		13.75	□□□□□ -0.21
CAMTA2-208	ENST00000572543	ERBB4	Q15303	1308 aa		13.75	□□□□□ -0.21
CAMTA2-208	ENST00000572543	RTL1	A6NKG5	1358 aa		13.75	□□□□□ -0.21
CAMTA2-208	ENST00000572543	TMCO3	Q6UWJ1	677 aa		13.75	□□□□□ -0.21
CAMTA2-208	ENST00000572543	AK7	Q96M32	723 aa		13.75	□□□□□ -0.21
CAMTA2-208	ENST00000572543	CTNNA3	Q9UI47	895 aa		13.75	□□□□□ -0.21
CAMTA2-208	ENST00000572543	RBM8A	Q9Y5S9	174 aa	Known RBP	13.75	□□□□□ -0.21
CAMTA2-208	ENST00000572543	KIF1B	O60333	1816 aa		13.75	□□□□□ -0.21
CAMTA2-208	ENST00000572543	PI4KAP2	A4QPH2	592 aa		13.75	□□□□□ -0.21
CAMTA2-208	ENST00000572543	PI4KAP1	Q8N8J0	262 aa		13.75	□□□□□ -0.21
CAMTA2-208	ENST00000572543	PODXL2	Q9NZ53	605 aa		13.75	□□□□□ -0.21
CAMTA2-208	ENST00000572543	MAP3K4	Q9Y6R4	1608 aa		13.75	□□□□□ -0.21
CAMTA2-208	ENST00000572543	CLEC17A	Q6ZS10	378 aa		13.74	□□□□□ -0.21
CAMTA2-208	ENST00000572543	FEZ1	Q99689	392 aa		13.74	□□□□□ -0.21
CAMTA2-208	ENST00000572543	MTHFSD	Q2M296	383 aa	Known RBP	13.74	□□□□□ -0.21
CAMTA2-208	ENST00000572543	SLC26A8	Q96RN1	970 aa		13.74	□□□□□ -0.21
CAMTA2-208	ENST00000572543	DACH1	Q9UI36	760 aa		13.74	□□□□□ -0.21
CAMTA2-208	ENST00000572543	GADD45B	O75293	160 aa	Predicted RBP	13.74	□□□□□ -0.21
CAMTA2-208	ENST00000572543	LARP1	Q6PKG0	1096 aa	Known RBP	13.74	□□□□□ -0.21
CAMTA2-208	ENST00000572543	ERCC4	Q92889	916 aa	Predicted RBP	13.74	□□□□□ -0.21
CAMTA2-208	ENST00000572543	ERICH2	A1L162	156 aa		13.74	□□□□□ -0.21
CAMTA2-208	ENST00000572543	G2E3	Q7L622	706 aa		13.74	□□□□□ -0.21
CAMTA2-208	ENST00000572543	TTC21A	Q8NDW8	1320 aa		13.74	□□□□□ -0.21
CAMTA2-208	ENST00000572543	UGGT1	Q9NYU2	1555 aa		13.74	□□□□□ -0.21
CAMTA2-208	ENST00000572543	CLTCL1	P53675	1640 aa		13.73	□□□□□ -0.21
CAMTA2-208	ENST00000572543	PTGS1	P23219	599 aa		13.73	□□□□□ -0.21
CAMTA2-208	ENST00000572543	FSIP1	Q8NA03	581 aa		13.73	□□□□□ -0.21
CAMTA2-208	ENST00000572543	TRMT1	Q9NXH9	659 aa	Known RBP	13.73	□□□□□ -0.21
CAMTA2-208	ENST00000572543	PTCH1	Q13635	1447 aa		13.73	□□□□□ -0.21
CAMTA2-208	ENST00000572543	RAD50	Q92878	1312 aa		13.73	□□□□□ -0.21
CAMTA2-208	ENST00000572543	KRT222	Q8N1A0	295 aa		13.73	□□□□□ -0.21
CAMTA2-208	ENST00000572543	HSPA4	P34932	840 aa		13.72	□□□□□ -0.21
CAMTA2-208	ENST00000572543	FILIP1L	Q4L180	1135 aa		13.72	□□□□□ -0.21
CAMTA2-208	ENST00000572543	NEK1	Q96PY6	1258 aa		13.72	□□□□□ -0.21
CAMTA2-208	ENST00000572543	NLRP2	Q9NX02	1062 aa		13.72	□□□□□ -0.21
CAMTA2-208	ENST00000572543	CALCOCO1	Q9P1Z2	691 aa		13.72	□□□□□ -0.21
CAMTA2-208	ENST00000572543	SGSM2	O43147	1006 aa		13.72	□□□□□ -0.21
CAMTA2-208	ENST00000572543	CCDC158	Q5M9N0	1113 aa		13.72	□□□□□ -0.21
CAMTA2-208	ENST00000572543	CCAR1	Q8IX12	1150 aa	Known RBP	13.72	□□□□□ -0.21
CAMTA2-208	ENST00000572543	SIRT2	Q8IXJ6	389 aa		13.72	□□□□□ -0.21
CAMTA2-208	ENST00000572543	ZSCAN12	O43309	604 aa		13.72	□□□□□ -0.21
CAMTA2-208	ENST00000572543	HYPK	Q9NX55	129 aa		13.72	□□□□□ -0.21
CAMTA2-208	ENST00000572543	SNX14	Q9Y5W7	946 aa		13.72	□□□□□ -0.21
CAMTA2-208	ENST00000572543	OSBPL3	Q9H4L5	887 aa		13.72	□□□□□ -0.21
CAMTA2-208	ENST00000572543	CDKL5	O76039	1030 aa		13.71	□□□□□ -0.21
CAMTA2-208	ENST00000572543	LEKR1	Q6ZMV7	388 aa		13.71	□□□□□ -0.21
CAMTA2-208	ENST00000572543	ERICH4	A6NGS2	130 aa		13.71	□□□□□ -0.21
CAMTA2-208	ENST00000572543	SKIL	P12757	684 aa		13.71	□□□□□ -0.21
CAMTA2-208	ENST00000572543	SNW1	Q13573	536 aa	Known RBP	13.71	□□□□□ -0.21
CAMTA2-208	ENST00000572543	CFAP100	Q494V2	611 aa		13.71	□□□□□ -0.21
CAMTA2-208	ENST00000572543	AMOT	Q4VCS5	1084 aa		13.71	□□□□□ -0.21
CAMTA2-208	ENST00000572543	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	13.71	□□□□□ -0.21
CAMTA2-208	ENST00000572543	CCDC150	Q8NCX0	1101 aa		13.71	□□□□□ -0.21
CAMTA2-208	ENST00000572543	SMARCE1	Q969G3	411 aa		13.71	□□□□□ -0.21
CAMTA2-208	ENST00000572543	DNAJC25	Q9H1X3	360 aa		13.71	□□□□□ -0.21
CAMTA2-208	ENST00000572543	BMS1	Q14692	1282 aa	Known RBP	13.71	□□□□□ -0.22
CAMTA2-208	ENST00000572543	RUFY3	Q7L099	469 aa		13.71	□□□□□ -0.22
CAMTA2-208	ENST00000572543	ALDH1L1	O75891	902 aa		13.7	□□□□□ -0.22
CAMTA2-208	ENST00000572543	MYL6B	P14649	208 aa		13.7	□□□□□ -0.22
CAMTA2-208	ENST00000572543	MAP3K2	Q9Y2U5	619 aa		13.7	□□□□□ -0.22
CAMTA2-208	ENST00000572543	FLT4	P35916	1363 aa		13.7	□□□□□ -0.22
CAMTA2-208	ENST00000572543	ERLIN1	O75477	346 aa		13.7	□□□□□ -0.22
CAMTA2-208	ENST00000572543	ATF3	P18847	181 aa		13.7	□□□□□ -0.22
CAMTA2-208	ENST00000572543	OGFR	Q9NZT2	677 aa		13.7	□□□□□ -0.22
CAMTA2-208	ENST00000572543	FAM135B	Q49AJ0	1406 aa		13.7	□□□□□ -0.22
CAMTA2-208	ENST00000572543	ZNF853	P0CG23	659 aa		13.7	□□□□□ -0.22
CAMTA2-208	ENST00000572543	XBP1	P17861	261 aa		13.7	□□□□□ -0.22
CAMTA2-208	ENST00000572543	CUL4A	Q13619	759 aa		13.7	□□□□□ -0.22
CAMTA2-208	ENST00000572543	RGS12	O14924	1447 aa		13.7	□□□□□ -0.22
CAMTA2-208	ENST00000572543	SPHKAP	Q2M3C7	1700 aa		13.7	□□□□□ -0.22
CAMTA2-208	ENST00000572543	TTC39A	Q5SRH9	613 aa		13.7	□□□□□ -0.22
CAMTA2-208	ENST00000572543	FAM177A1	Q8N128	213 aa	Predicted RBP	13.7	□□□□□ -0.22
CAMTA2-208	ENST00000572543	RIOK3	O14730	519 aa	Known RBP	13.69	□□□□□ -0.22
CAMTA2-208	ENST00000572543	CREB3L3	Q68CJ9	461 aa		13.69	□□□□□ -0.22
CAMTA2-208	ENST00000572543	KCNH5	Q8NCM2	988 aa		13.69	□□□□□ -0.22
CAMTA2-208	ENST00000572543	C8orf76	Q96K31	380 aa		13.69	□□□□□ -0.22
CAMTA2-208	ENST00000572543	FOXO3	O43524	673 aa		13.69	□□□□□ -0.22
CAMTA2-208	ENST00000572543	EIF3J	O75822	258 aa	Known RBP	13.69	□□□□□ -0.22
CAMTA2-208	ENST00000572543	SART3	Q15020	963 aa	Known RBP	13.69	□□□□□ -0.22
CAMTA2-208	ENST00000572543	LUZP1	Q86V48	1076 aa		13.69	□□□□□ -0.22
CAMTA2-208	ENST00000572543	PPFIBP1	Q86W92	1011 aa		13.69	□□□□□ -0.22
CAMTA2-208	ENST00000572543	CCDC47	Q96A33	483 aa	Known RBP	13.69	□□□□□ -0.22
CAMTA2-208	ENST00000572543	TULP1	O00294	542 aa	Predicted RBP	13.69	□□□□□ -0.22
CAMTA2-208	ENST00000572543	KIF20A	O95235	890 aa		13.69	□□□□□ -0.22
CAMTA2-208	ENST00000572543	TUBB4A	P04350	444 aa		13.69	□□□□□ -0.22
CAMTA2-208	ENST00000572543	ANKLE2	Q86XL3	938 aa		13.69	□□□□□ -0.22
CAMTA2-208	ENST00000572543	USHBP1	Q8N6Y0	703 aa		13.69	□□□□□ -0.22
CAMTA2-208	ENST00000572543	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.69	□□□□□ -0.22	2e-6	■■■■□ 20.5
CAMTA2-208	ENST00000572543	TBC1D2B	Q9UPU7	963 aa		13.69	□□□□□ -0.22
CAMTA2-208	ENST00000572543	URI1	O94763	535 aa	Predicted RBP	13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms