RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 HOXB7P09629 217 aa9.07□□□□□ -0.96
SMG6-209ENST00000571442 POLD1P28340 1107 aa9.07□□□□□ -0.96
SMG6-209ENST00000571442 EXOSC9Q06265 439 aaKnown RBP9.07□□□□□ -0.96
SMG6-209ENST00000571442 HDGFL1Q5TGJ6 251 aa9.07□□□□□ -0.96
SMG6-209ENST00000571442 BICDL1Q6ZP65 573 aa9.07□□□□□ -0.96
SMG6-209ENST00000571442 KLHL34Q8N239 644 aa9.07□□□□□ -0.96
SMG6-209ENST00000571442 NLGN1Q8N2Q7 840 aa9.07□□□□□ -0.96
SMG6-209ENST00000571442 XAGE3Q8WTP9 111 aa9.07□□□□□ -0.96
SMG6-209ENST00000571442 SYT17Q9BSW7 474 aa9.07□□□□□ -0.96
SMG6-209ENST00000571442 ERBB4Q15303 1308 aa9.06□□□□□ -0.96
SMG6-209ENST00000571442 C10orf71Q711Q0 1435 aa9.06□□□□□ -0.96
SMG6-209ENST00000571442 A0A087WZG4 1122 aa9.06□□□□□ -0.96
SMG6-209ENST00000571442 VAMP4O75379 141 aa9.06□□□□□ -0.96
SMG6-209ENST00000571442 SLFN5Q08AF3 891 aa9.06□□□□□ -0.96
SMG6-209ENST00000571442 COPS6Q7L5N1 327 aa9.06□□□□□ -0.96
SMG6-209ENST00000571442 CCDC24Q8N4L8 307 aa9.06□□□□□ -0.96
SMG6-209ENST00000571442 ZBTB3Q9H5J0 574 aa9.06□□□□□ -0.96
SMG6-209ENST00000571442 PHAXQ9H814 394 aaKnown RBP9.06□□□□□ -0.96
SMG6-209ENST00000571442 DDX21Q9NR30 783 aaKnown RBP eCLIP9.06□□□□□ -0.96
SMG6-209ENST00000571442 MAP3K15Q6ZN16 1313 aa9.05□□□□□ -0.96
SMG6-209ENST00000571442 ANKRD36CQ5JPF3 1778 aa9.05□□□□□ -0.96
SMG6-209ENST00000571442 ARFGEF2Q9Y6D5 1785 aa9.05□□□□□ -0.96
SMG6-209ENST00000571442 AIMP1Q12904 312 aaKnown RBP9.05□□□□□ -0.96
SMG6-209ENST00000571442 TWISTNBQ3B726 338 aaPredicted RBP9.05□□□□□ -0.96
SMG6-209ENST00000571442 G2E3Q7L622 706 aa9.05□□□□□ -0.96
SMG6-209ENST00000571442 TRMT2AQ8IZ69 625 aaKnown RBP9.05□□□□□ -0.96
SMG6-209ENST00000571442 ZNF428Q96B54 188 aa9.05□□□□□ -0.96
SMG6-209ENST00000571442 UBN2Q6ZU65 1347 aa9.05□□□□□ -0.96
SMG6-209ENST00000571442 PXDNLA1KZ92 1463 aa9.04□□□□□ -0.96
SMG6-209ENST00000571442 SERPINB2P05120 415 aa9.04□□□□□ -0.96
SMG6-209ENST00000571442 GOLGA2Q08379 1002 aa9.04□□□□□ -0.96
SMG6-209ENST00000571442 WWC3Q9ULE0 1092 aa9.04□□□□□ -0.96
SMG6-209ENST00000571442 PARP3Q9Y6F1 533 aa9.04□□□□□ -0.96
SMG6-209ENST00000571442 COL11A2P13942 1736 aaPredicted RBP9.04□□□□□ -0.96
SMG6-209ENST00000571442 BRCA1P38398 1863 aaKnown RBP9.04□□□□□ -0.96
SMG6-209ENST00000571442 TNRC6CQ9HCJ0 1690 aaKnown RBP9.04□□□□□ -0.96
SMG6-209ENST00000571442 FAM177BA6PVY3 158 aa9.03□□□□□ -0.96
SMG6-209ENST00000571442 ERVV-1B6SEH8 477 aa9.03□□□□□ -0.96
SMG6-209ENST00000571442 GPTP24298 496 aa9.03□□□□□ -0.96
SMG6-209ENST00000571442 HNRNPUQ00839 825 aaKnown RBP eCLIP9.03□□□□□ -0.96
SMG6-209ENST00000571442 PRR5LQ6MZQ0 368 aa9.03□□□□□ -0.96
SMG6-209ENST00000571442 DBF4Q9UBU7 674 aaPredicted RBP9.03□□□□□ -0.96
SMG6-209ENST00000571442 ATP10DQ9P241 1426 aa9.03□□□□□ -0.96
SMG6-209ENST00000571442 ABCC12Q96J65 1359 aa9.02□□□□□ -0.97
SMG6-209ENST00000571442 E9PSI1 815 aa9.02□□□□□ -0.97
SMG6-209ENST00000571442 KCNA3P22001 575 aa9.02□□□□□ -0.97
SMG6-209ENST00000571442 CHRNA5P30532 468 aa9.02□□□□□ -0.97
SMG6-209ENST00000571442 GPR162Q16538 588 aa9.02□□□□□ -0.97
SMG6-209ENST00000571442 SUSD4Q5VX71 490 aa9.02□□□□□ -0.97
SMG6-209ENST00000571442 CLEC4GQ6UXB4 293 aa9.02□□□□□ -0.97
SMG6-209ENST00000571442 GIGYF2Q6Y7W6 1299 aaKnown RBP9.02□□□□□ -0.97
SMG6-209ENST00000571442 KIF6Q6ZMV9 814 aa9.02□□□□□ -0.97
SMG6-209ENST00000571442 ZNF34Q8IZ26 560 aa9.02□□□□□ -0.97
SMG6-209ENST00000571442 PELP1Q8IZL8 1130 aaKnown RBP9.02□□□□□ -0.97
SMG6-209ENST00000571442 MYH16Q9H6N6 1097 aa9.02□□□□□ -0.97
SMG6-209ENST00000571442 NIP7Q9Y221 180 aaKnown RBP eCLIP9.02□□□□□ -0.97
SMG6-209ENST00000571442 CD2APQ9Y5K6 639 aa9.02□□□□□ -0.97
SMG6-209ENST00000571442 ADCY9O60503 1353 aa9.01□□□□□ -0.97
SMG6-209ENST00000571442 CACNA1FO60840 1977 aa9.01□□□□□ -0.97
SMG6-209ENST00000571442 A0A0G2JLW4 131 aa9.01□□□□□ -0.97
SMG6-209ENST00000571442 DPEP1P16444 411 aa9.01□□□□□ -0.97
SMG6-209ENST00000571442 YBX3P16989 372 aaKnown RBP eCLIP9.01□□□□□ -0.97
SMG6-209ENST00000571442 CCDC30Q5VVM6 783 aa9.01□□□□□ -0.97
SMG6-209ENST00000571442 NPM2Q86SE8 214 aaKnown RBP9.01□□□□□ -0.97
SMG6-209ENST00000571442 NUTM1Q86Y26 1132 aa9.01□□□□□ -0.97
SMG6-209ENST00000571442 SYNE4Q8N205 404 aa9.01□□□□□ -0.97
SMG6-209ENST00000571442 ZNF784Q8NCA9 323 aaPredicted RBP9.01□□□□□ -0.97
SMG6-209ENST00000571442 PLBD2Q8NHP8 589 aa9.01□□□□□ -0.97
SMG6-209ENST00000571442 SETDB2Q96T68 719 aa9.01□□□□□ -0.97
SMG6-209ENST00000571442 HYPKQ9NX55 129 aa9.01□□□□□ -0.97
SMG6-209ENST00000571442 GOLGB1Q14789 3259 aaKnown RBP9.01□□□□□ -0.97
SMG6-209ENST00000571442 DLEC1Q9Y238 1755 aa9.01□□□□□ -0.97
SMG6-209ENST00000571442 ATP5J2-PTCD1G3V325 749 aa9□□□□□ -0.97
SMG6-209ENST00000571442 RGL2O15211 777 aa9□□□□□ -0.97
SMG6-209ENST00000571442 NTSR2O95665 410 aa9□□□□□ -0.97
SMG6-209ENST00000571442 SLC4A2P04920 1241 aa9□□□□□ -0.97
SMG6-209ENST00000571442 ANKRD13DQ6ZTN6 518 aa9□□□□□ -0.97
SMG6-209ENST00000571442 C3orf67Q6ZVT6 689 aa9□□□□□ -0.97
SMG6-209ENST00000571442 ISCA1Q9BUE6 129 aa9□□□□□ -0.97
SMG6-209ENST00000571442 ZNF652Q9Y2D9 606 aa9□□□□□ -0.97
SMG6-209ENST00000571442 CACNA1SQ13698 1873 aa9□□□□□ -0.97
SMG6-209ENST00000571442 DDX60Q8IY21 1712 aaKnown RBP9□□□□□ -0.97
SMG6-209ENST00000571442 LAMB2P55268 1798 aa8.99□□□□□ -0.97
SMG6-209ENST00000571442 TCIRG1Q13488 830 aa8.99□□□□□ -0.97
SMG6-209ENST00000571442 ERFEQ4G0M1 354 aa8.99□□□□□ -0.97
SMG6-209ENST00000571442 SLC51AQ86UW1 340 aa8.99□□□□□ -0.97
SMG6-209ENST00000571442 NLRP10Q86W26 655 aa8.99□□□□□ -0.97
SMG6-209ENST00000571442 MRPL50Q8N5N7 158 aaKnown RBP8.99□□□□□ -0.97
SMG6-209ENST00000571442 BCL2L13Q9BXK5 485 aa8.99□□□□□ -0.97
SMG6-209ENST00000571442 COL4A1P02462 1669 aa8.99□□□□□ -0.97
SMG6-209ENST00000571442 PI4KAP2A4QPH2 592 aa8.98□□□□□ -0.97
SMG6-209ENST00000571442 F6X3S4 739 aa8.98□□□□□ -0.97
SMG6-209ENST00000571442 IGKV5-2P06315 115 aa8.98□□□□□ -0.97
SMG6-209ENST00000571442 FLIIQ13045 1269 aa8.98□□□□□ -0.97
SMG6-209ENST00000571442 RIC3Q7Z5B4 369 aa8.98□□□□□ -0.97
SMG6-209ENST00000571442 NBPF5PQ86XG9 351 aaPredicted RBP8.98□□□□□ -0.97
SMG6-209ENST00000571442 PI4KAP1Q8N8J0 262 aa8.98□□□□□ -0.97
SMG6-209ENST00000571442 CNBD1Q8NA66 436 aa8.98□□□□□ -0.97
SMG6-209ENST00000571442 SSH1Q8WYL5 1049 aa8.98□□□□□ -0.97
SMG6-209ENST00000571442 JARID2Q92833 1246 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms