RNA–Protein interactions for RNA: ENST00000571058.5

RPA1-203, Transcript of replication protein A1, humanhuman

TSL 4

Gene RPA1, Length 577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-203ENST00000571058 TRIM35Q9UPQ4 493 aa22.58■■□□□ 1.21
RPA1-203ENST00000571058 CHL1O00533 1208 aa22.57■■□□□ 1.2
RPA1-203ENST00000571058 TTLL6Q8N841 843 aa22.57■■□□□ 1.2
RPA1-203ENST00000571058 KIF6Q6ZMV9 814 aa22.56■■□□□ 1.2
RPA1-203ENST00000571058 NBPF5PQ86XG9 351 aaPredicted RBP22.56■■□□□ 1.2
RPA1-203ENST00000571058 ANKRD31Q8N7Z5 1873 aa22.56■■□□□ 1.2
RPA1-203ENST00000571058 TPTE2Q6XPS3 522 aa22.55■■□□□ 1.2
RPA1-203ENST00000571058 GPBP1L1Q9HC44 474 aaPredicted RBP22.55■■□□□ 1.2
RPA1-203ENST00000571058 NIP7Q9Y221 180 aaKnown RBP eCLIP22.55■■□□□ 1.2
RPA1-203ENST00000571058 CALD1Q05682 793 aaKnown RBP22.54■■□□□ 1.2
RPA1-203ENST00000571058 MAP3K15Q6ZN16 1313 aa22.54■■□□□ 1.2
RPA1-203ENST00000571058 MYL6BP14649 208 aa22.53■■□□□ 1.2
RPA1-203ENST00000571058 NGEFQ8N5V2 710 aa22.52■■□□□ 1.2
RPA1-203ENST00000571058 CFAP44Q96MT7 982 aa22.52■■□□□ 1.2
RPA1-203ENST00000571058 ANP32CO43423 234 aa22.51■■□□□ 1.19
RPA1-203ENST00000571058 HOXB7P09629 217 aa22.51■■□□□ 1.19
RPA1-203ENST00000571058 HLFQ16534 295 aa22.51■■□□□ 1.19
RPA1-203ENST00000571058 NUP98P52948 1817 aa22.51■■□□□ 1.19
RPA1-203ENST00000571058 APAF1O14727 1248 aa22.5■■□□□ 1.19
RPA1-203ENST00000571058 EIF2S2P20042 333 aaKnown RBP22.5■■□□□ 1.19
RPA1-203ENST00000571058 C1QTNF8P60827 252 aa22.5■■□□□ 1.19
RPA1-203ENST00000571058 STYK1Q6J9G0 422 aa22.5■■□□□ 1.19
RPA1-203ENST00000571058 CNKSR1Q969H4 720 aa22.5■■□□□ 1.19
RPA1-203ENST00000571058 ZNF622Q969S3 477 aaKnown RBP eCLIP22.5■■□□□ 1.194e-10■□□□□ 8.7
RPA1-203ENST00000571058 NYXQ9GZU5 481 aa22.5■■□□□ 1.19
RPA1-203ENST00000571058 LAS1LQ9Y4W2 734 aaKnown RBP22.5■■□□□ 1.19
RPA1-203ENST00000571058 TTLL7Q6ZT98 887 aa22.49■■□□□ 1.19
RPA1-203ENST00000571058 MASTLQ96GX5 879 aa22.49■■□□□ 1.19
RPA1-203ENST00000571058 IBTKQ9P2D0 1353 aaPredicted RBP22.49■■□□□ 1.19
RPA1-203ENST00000571058 COL11A2P13942 1736 aaPredicted RBP22.48■■□□□ 1.19
RPA1-203ENST00000571058 SRGNP10124 158 aa22.48■■□□□ 1.19
RPA1-203ENST00000571058 C9orf131Q5VYM1 1079 aa22.48■■□□□ 1.19
RPA1-203ENST00000571058 CCDC24Q8N4L8 307 aa22.48■■□□□ 1.19
RPA1-203ENST00000571058 SBF1O95248 1867 aa22.47■■□□□ 1.19
RPA1-203ENST00000571058 KLRG2A4D1S0 409 aaPredicted RBP22.47■■□□□ 1.19
RPA1-203ENST00000571058 GTF2E1P29083 439 aaPredicted RBP22.47■■□□□ 1.19
RPA1-203ENST00000571058 PDIA6Q15084 440 aa22.47■■□□□ 1.19
RPA1-203ENST00000571058 GIGYF2Q6Y7W6 1299 aaKnown RBP22.47■■□□□ 1.19
RPA1-203ENST00000571058 LRP10Q7Z4F1 713 aa22.47■■□□□ 1.19
RPA1-203ENST00000571058 IFT57Q9NWB7 429 aa22.47■■□□□ 1.19
RPA1-203ENST00000571058 ZC3H4Q9UPT8 1303 aaKnown RBP22.47■■□□□ 1.19
RPA1-203ENST00000571058 GNAI1P63096 354 aa22.46■■□□□ 1.19
RPA1-203ENST00000571058 SOGA3Q5TF21 947 aa22.46■■□□□ 1.19
RPA1-203ENST00000571058 ZBTB3Q9H5J0 574 aa22.46■■□□□ 1.19
RPA1-203ENST00000571058 NPR1P16066 1061 aa22.45■■□□□ 1.18
RPA1-203ENST00000571058 LMNB1P20700 586 aa22.45■■□□□ 1.18
RPA1-203ENST00000571058 ZNF526Q8TF50 670 aaPredicted RBP22.45■■□□□ 1.18
RPA1-203ENST00000571058 DDX21Q9NR30 783 aaKnown RBP eCLIP22.45■■□□□ 1.18
RPA1-203ENST00000571058 RNF181Q9P0P0 153 aa22.45■■□□□ 1.18
RPA1-203ENST00000571058 ARFGEF2Q9Y6D5 1785 aa22.45■■□□□ 1.18
RPA1-203ENST00000571058 ZNF853P0CG23 659 aa22.44■■□□□ 1.18
RPA1-203ENST00000571058 PARP10Q53GL7 1025 aa22.44■■□□□ 1.18
RPA1-203ENST00000571058 ZNF34Q8IZ26 560 aa22.44■■□□□ 1.18
RPA1-203ENST00000571058 HSP90AB3PQ58FF7 597 aa22.43■■□□□ 1.18
RPA1-203ENST00000571058 HDGFL1Q5TGJ6 251 aa22.43■■□□□ 1.18
RPA1-203ENST00000571058 CHMP4AQ9BY43 222 aa22.43■■□□□ 1.18
RPA1-203ENST00000571058 MRS2Q9HD23 443 aa22.43■■□□□ 1.18
RPA1-203ENST00000571058 MBIPQ9NS73 344 aa22.43■■□□□ 1.18
RPA1-203ENST00000571058 RIC1Q4ADV7 1423 aa22.42■■□□□ 1.18
RPA1-203ENST00000571058 FAM177BA6PVY3 158 aa22.42■■□□□ 1.18
RPA1-203ENST00000571058 PROSER3Q2NL68 480 aa22.42■■□□□ 1.18
RPA1-203ENST00000571058 CCDC184Q52MB2 194 aa22.42■■□□□ 1.18
RPA1-203ENST00000571058 NCBP3Q53F19 620 aaKnown RBP22.42■■□□□ 1.18
RPA1-203ENST00000571058 PRPF40BQ6NWY9 871 aaKnown RBP22.42■■□□□ 1.18
RPA1-203ENST00000571058 PPP1R42Q7Z4L9 355 aa22.42■■□□□ 1.18
RPA1-203ENST00000571058 DBF4Q9UBU7 674 aaPredicted RBP22.42■■□□□ 1.18
RPA1-203ENST00000571058 C21orf2O43822 256 aa22.41■■□□□ 1.18
RPA1-203ENST00000571058 CCDC27Q2M243 656 aa22.41■■□□□ 1.18
RPA1-203ENST00000571058 KRT24Q2M2I5 525 aa22.41■■□□□ 1.18
RPA1-203ENST00000571058 COPS6Q7L5N1 327 aa22.41■■□□□ 1.18
RPA1-203ENST00000571058 SLX4Q8IY92 1834 aa22.41■■□□□ 1.18
RPA1-203ENST00000571058 RNF123Q5XPI4 1314 aa22.4■■□□□ 1.18
RPA1-203ENST00000571058 UBN2Q6ZU65 1347 aa22.4■■□□□ 1.18
RPA1-203ENST00000571058 KDM2BQ8NHM5 1336 aa22.4■■□□□ 1.18
RPA1-203ENST00000571058 LTBP3Q9NS15 1303 aa22.4■■□□□ 1.18
RPA1-203ENST00000571058 GPTP24298 496 aa22.4■■□□□ 1.18
RPA1-203ENST00000571058 ALDH1B1P30837 517 aa22.4■■□□□ 1.18
RPA1-203ENST00000571058 RASSF7Q02833 373 aa22.4■■□□□ 1.18
RPA1-203ENST00000571058 DUSP27Q5VZP5 1158 aa22.4■■□□□ 1.18
RPA1-203ENST00000571058 XAGE3Q8WTP9 111 aa22.4■■□□□ 1.18
RPA1-203ENST00000571058 NECTIN2Q92692 538 aa22.4■■□□□ 1.18
RPA1-203ENST00000571058 FER1L6Q2WGJ9 1857 aa22.4■■□□□ 1.18
RPA1-203ENST00000571058 NFKBIEO00221 500 aa22.39■■□□□ 1.17
RPA1-203ENST00000571058 ANXA1P04083 346 aa22.39■■□□□ 1.17
RPA1-203ENST00000571058 CRY2Q49AN0 593 aa22.39■■□□□ 1.17
RPA1-203ENST00000571058 CHPF2Q9P2E5 772 aa22.39■■□□□ 1.17
RPA1-203ENST00000571058 CACNA1SQ13698 1873 aa22.39■■□□□ 1.17
RPA1-203ENST00000571058 SUSD4Q5VX71 490 aa22.38■■□□□ 1.17
RPA1-203ENST00000571058 HYPKQ9NX55 129 aa22.38■■□□□ 1.17
RPA1-203ENST00000571058 ANKRD36CQ5JPF3 1778 aa22.38■■□□□ 1.17
RPA1-203ENST00000571058 AIMP1Q12904 312 aaKnown RBP22.37■■□□□ 1.17
RPA1-203ENST00000571058 ERFEQ4G0M1 354 aa22.37■■□□□ 1.17
RPA1-203ENST00000571058 NUTM1Q86Y26 1132 aa22.37■■□□□ 1.17
RPA1-203ENST00000571058 TAOK3Q9H2K8 898 aa22.37■■□□□ 1.17
RPA1-203ENST00000571058 ABCC12Q96J65 1359 aa22.37■■□□□ 1.17
RPA1-203ENST00000571058 CCDC88AQ3V6T2 1871 aa22.37■■□□□ 1.17
RPA1-203ENST00000571058 KIF3CO14782 793 aa22.36■■□□□ 1.17
RPA1-203ENST00000571058 NTSR2O95665 410 aa22.36■■□□□ 1.17
RPA1-203ENST00000571058 UTP14AQ9BVJ6 771 aaKnown RBP22.36■■□□□ 1.17
RPA1-203ENST00000571058 TCIRG1Q13488 830 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms