RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 ANXA1P04083 346 aa17.48■□□□□ 0.39
RPAIN-207ENST00000570883 CALD1Q05682 793 aaKnown RBP17.48■□□□□ 0.39
RPAIN-207ENST00000570883 HLFQ16534 295 aa17.48■□□□□ 0.39
RPAIN-207ENST00000570883 WWC1Q8IX03 1113 aa17.48■□□□□ 0.39
RPAIN-207ENST00000570883 FAM9BQ8IZU0 186 aa17.48■□□□□ 0.39
RPAIN-207ENST00000570883 NGEFQ8N5V2 710 aa17.48■□□□□ 0.39
RPAIN-207ENST00000570883 KCNA3P22001 575 aa17.47■□□□□ 0.39
RPAIN-207ENST00000570883 GNAI1P63096 354 aa17.47■□□□□ 0.39
RPAIN-207ENST00000570883 CLEC4GQ6UXB4 293 aa17.47■□□□□ 0.39
RPAIN-207ENST00000570883 NECTIN2Q92692 538 aa17.47■□□□□ 0.39
RPAIN-207ENST00000570883 RGL2O15211 777 aa17.46■□□□□ 0.39
RPAIN-207ENST00000570883 NCBP3Q53F19 620 aaKnown RBP17.46■□□□□ 0.39
RPAIN-207ENST00000570883 ZNF652Q9Y2D9 606 aa17.46■□□□□ 0.39
RPAIN-207ENST00000570883 ATP10DQ9P241 1426 aa17.46■□□□□ 0.39
RPAIN-207ENST00000570883 MAP3K15Q6ZN16 1313 aa17.46■□□□□ 0.38
RPAIN-207ENST00000570883 TNRC6CQ9HCJ0 1690 aaKnown RBP17.45■□□□□ 0.38
RPAIN-207ENST00000570883 HOXB7P09629 217 aa17.45■□□□□ 0.38
RPAIN-207ENST00000570883 CHRNA5P30532 468 aa17.45■□□□□ 0.38
RPAIN-207ENST00000570883 DUSP27Q5VZP5 1158 aa17.45■□□□□ 0.38
RPAIN-207ENST00000570883 PRR5LQ6MZQ0 368 aa17.45■□□□□ 0.38
RPAIN-207ENST00000570883 SETDB2Q96T68 719 aa17.45■□□□□ 0.38
RPAIN-207ENST00000570883 ARFGEF2Q9Y6D5 1785 aa17.45■□□□□ 0.38
RPAIN-207ENST00000570883 ERVV-1B6SEH8 477 aa17.44■□□□□ 0.38
RPAIN-207ENST00000570883 YY1P25490 414 aa17.44■□□□□ 0.38
RPAIN-207ENST00000570883 CCDC24Q8N4L8 307 aa17.44■□□□□ 0.38
RPAIN-207ENST00000570883 TSR2Q969E8 191 aaKnown RBP17.44■□□□□ 0.38
RPAIN-207ENST00000570883 ZBTB3Q9H5J0 574 aa17.44■□□□□ 0.38
RPAIN-207ENST00000570883 GRIN3BO60391 1043 aa17.43■□□□□ 0.38
RPAIN-207ENST00000570883 HDGFL1Q5TGJ6 251 aa17.43■□□□□ 0.38
RPAIN-207ENST00000570883 KIF6Q6ZMV9 814 aa17.43■□□□□ 0.38
RPAIN-207ENST00000570883 CNBD1Q8NA66 436 aa17.43■□□□□ 0.38
RPAIN-207ENST00000570883 DDX21Q9NR30 783 aaKnown RBP eCLIP17.43■□□□□ 0.38
RPAIN-207ENST00000570883 CHPF2Q9P2E5 772 aa17.43■□□□□ 0.38
RPAIN-207ENST00000570883 NIP7Q9Y221 180 aaKnown RBP eCLIP17.43■□□□□ 0.38
RPAIN-207ENST00000570883 SALL2Q9Y467 1007 aaPredicted RBP17.43■□□□□ 0.38
RPAIN-207ENST00000570883 SBF1O95248 1867 aa17.42■□□□□ 0.38
RPAIN-207ENST00000570883 C8orf58Q8NAV2 365 aa17.42■□□□□ 0.38
RPAIN-207ENST00000570883 CACNA1FO60840 1977 aa17.42■□□□□ 0.38
RPAIN-207ENST00000570883 IL16Q14005 1332 aa17.42■□□□□ 0.38
RPAIN-207ENST00000570883 XAGE3Q8WTP9 111 aa17.41■□□□□ 0.38
RPAIN-207ENST00000570883 BCS1LQ9Y276 419 aa17.41■□□□□ 0.38
RPAIN-207ENST00000570883 UBN2Q6ZU65 1347 aa17.41■□□□□ 0.38
RPAIN-207ENST00000570883 SLX4Q8IY92 1834 aa17.4■□□□□ 0.38
RPAIN-207ENST00000570883 ELL2O00472 640 aaPredicted RBP17.4■□□□□ 0.38
RPAIN-207ENST00000570883 NBPF5PQ86XG9 351 aaPredicted RBP17.4■□□□□ 0.38
RPAIN-207ENST00000570883 TSPYL6Q8N831 410 aa17.4■□□□□ 0.38
RPAIN-207ENST00000570883 BRIP1Q9BX63 1249 aa17.4■□□□□ 0.38
RPAIN-207ENST00000570883 PIM2Q9P1W9 311 aa17.4■□□□□ 0.38
RPAIN-207ENST00000570883 LAMB2P55268 1798 aa17.4■□□□□ 0.38
RPAIN-207ENST00000570883 CCDC88AQ3V6T2 1871 aa17.39■□□□□ 0.38
RPAIN-207ENST00000570883 GPTP24298 496 aa17.39■□□□□ 0.37
RPAIN-207ENST00000570883 GIGYF2Q6Y7W6 1299 aaKnown RBP17.39■□□□□ 0.37
RPAIN-207ENST00000570883 COPS6Q7L5N1 327 aa17.39■□□□□ 0.37
RPAIN-207ENST00000570883 C2CD5Q86YS7 1000 aa17.39■□□□□ 0.37
RPAIN-207ENST00000570883 DBF4Q9UBU7 674 aaPredicted RBP17.39■□□□□ 0.37
RPAIN-207ENST00000570883 ABCC12Q96J65 1359 aa17.39■□□□□ 0.37
RPAIN-207ENST00000570883 FAM177BA6PVY3 158 aa17.38■□□□□ 0.37
RPAIN-207ENST00000570883 CCER2I3L3R5 266 aa17.38■□□□□ 0.37
RPAIN-207ENST00000570883 AIMP1Q12904 312 aaKnown RBP17.38■□□□□ 0.37
RPAIN-207ENST00000570883 WDR63Q8IWG1 891 aa17.38■□□□□ 0.37
RPAIN-207ENST00000570883 ZNF34Q8IZ26 560 aa17.38■□□□□ 0.37
RPAIN-207ENST00000570883 FANCIQ9NVI1 1328 aa17.38■□□□□ 0.37
RPAIN-207ENST00000570883 ST5P78524 1137 aa17.37■□□□□ 0.37
RPAIN-207ENST00000570883 DALRD3Q5D0E6 543 aaKnown RBP17.37■□□□□ 0.37
RPAIN-207ENST00000570883 SPINK5Q9NQ38 1064 aaPredicted RBP17.37■□□□□ 0.37
RPAIN-207ENST00000570883 IBTKQ9P2D0 1353 aaPredicted RBP17.37■□□□□ 0.37
RPAIN-207ENST00000570883 FER1L6Q2WGJ9 1857 aa17.37■□□□□ 0.37
RPAIN-207ENST00000570883 NPHP1O15259 732 aa17.36■□□□□ 0.37
RPAIN-207ENST00000570883 PDE6BP35913 854 aa17.36■□□□□ 0.37
RPAIN-207ENST00000570883 ZNF521Q96K83 1311 aa17.36■□□□□ 0.37
RPAIN-207ENST00000570883 DDX60Q8IY21 1712 aaKnown RBP17.35■□□□□ 0.37
RPAIN-207ENST00000570883 H0YIN7 160 aa17.35■□□□□ 0.37
RPAIN-207ENST00000570883 SUSD4Q5VX71 490 aa17.35■□□□□ 0.37
RPAIN-207ENST00000570883 TPTE2Q6XPS3 522 aa17.35■□□□□ 0.37
RPAIN-207ENST00000570883 HYPKQ9NX55 129 aa17.35■□□□□ 0.37
RPAIN-207ENST00000570883 ADCY9O60503 1353 aa17.35■□□□□ 0.37
RPAIN-207ENST00000570883 RIC1Q4ADV7 1423 aa17.35■□□□□ 0.37
RPAIN-207ENST00000570883 NTSR2O95665 410 aa17.34■□□□□ 0.37
RPAIN-207ENST00000570883 NUTM1Q86Y26 1132 aa17.34■□□□□ 0.37
RPAIN-207ENST00000570883 KLRG2A4D1S0 409 aaPredicted RBP17.33■□□□□ 0.36
RPAIN-207ENST00000570883 SRGNP10124 158 aa17.33■□□□□ 0.36
RPAIN-207ENST00000570883 ERFEQ4G0M1 354 aa17.33■□□□□ 0.36
RPAIN-207ENST00000570883 DIEXFQ68CQ4 756 aaKnown RBP17.33■□□□□ 0.36
RPAIN-207ENST00000570883 PHAXQ9H814 394 aaKnown RBP17.33■□□□□ 0.36
RPAIN-207ENST00000570883 PDZRN3Q9UPQ7 1066 aa17.33■□□□□ 0.36
RPAIN-207ENST00000570883 DICER1Q9UPY3 1922 aaKnown RBP17.32■□□□□ 0.36
RPAIN-207ENST00000570883 TWISTNBQ3B726 338 aaPredicted RBP17.32■□□□□ 0.36
RPAIN-207ENST00000570883 PARP10Q53GL7 1025 aa17.32■□□□□ 0.36
RPAIN-207ENST00000570883 TTLL6Q8N841 843 aa17.32■□□□□ 0.36
RPAIN-207ENST00000570883 ZNF784Q8NCA9 323 aaPredicted RBP17.32■□□□□ 0.36
RPAIN-207ENST00000570883 PLBD2Q8NHP8 589 aa17.32■□□□□ 0.36
RPAIN-207ENST00000570883 NYXQ9GZU5 481 aa17.32■□□□□ 0.36
RPAIN-207ENST00000570883 TAF1P21675 1872 aa17.31■□□□□ 0.36
RPAIN-207ENST00000570883 TCIRG1Q13488 830 aa17.31■□□□□ 0.36
RPAIN-207ENST00000570883 CCDC30Q5VVM6 783 aa17.31■□□□□ 0.36
RPAIN-207ENST00000570883 ANKRD13DQ6ZTN6 518 aa17.31■□□□□ 0.36
RPAIN-207ENST00000570883 ARHGAP27Q6ZUM4 889 aa17.31■□□□□ 0.36
RPAIN-207ENST00000570883 NLRP10Q86W26 655 aa17.31■□□□□ 0.36
RPAIN-207ENST00000570883 MIER1Q8N108 512 aa17.31■□□□□ 0.36
RPAIN-207ENST00000570883 ZNF622Q969S3 477 aaKnown RBP eCLIP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms