RNA–Protein interactions for RNA: ENST00000570626.1

RBFOX1-221, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5

Gene RBFOX1, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-221ENST00000570626 PDZRN3Q9UPQ7 1066 aa13.59□□□□□ -0.23
RBFOX1-221ENST00000570626 EMILIN1Q9Y6C2 1016 aa13.59□□□□□ -0.23
RBFOX1-221ENST00000570626 SZT2Q5T011 3432 aa13.58□□□□□ -0.23
RBFOX1-221ENST00000570626 SOGA3Q5TF21 947 aa13.58□□□□□ -0.24
RBFOX1-221ENST00000570626 BICDL1Q6ZP65 573 aa13.58□□□□□ -0.24
RBFOX1-221ENST00000570626 HHIPL1Q96JK4 782 aa13.58□□□□□ -0.24
RBFOX1-221ENST00000570626 EYA1Q99502 592 aa13.58□□□□□ -0.24
RBFOX1-221ENST00000570626 BRIP1Q9BX63 1249 aa13.58□□□□□ -0.24
RBFOX1-221ENST00000570626 SCN11AQ9UI33 1791 aa13.58□□□□□ -0.24
RBFOX1-221ENST00000570626 KIF20BQ96Q89 1820 aa13.57□□□□□ -0.24
RBFOX1-221ENST00000570626 FZD9O00144 591 aa13.57□□□□□ -0.24
RBFOX1-221ENST00000570626 CABP4P57796 275 aa13.57□□□□□ -0.24
RBFOX1-221ENST00000570626 DNAJC10Q8IXB1 793 aa13.57□□□□□ -0.24
RBFOX1-221ENST00000570626 GPC2Q8N158 579 aa13.57□□□□□ -0.24
RBFOX1-221ENST00000570626 CNKSR1Q969H4 720 aa13.57□□□□□ -0.24
RBFOX1-221ENST00000570626 L3MBTL2Q969R5 705 aa13.57□□□□□ -0.24
RBFOX1-221ENST00000570626 HPS5Q9UPZ3 1129 aa13.57□□□□□ -0.24
RBFOX1-221ENST00000570626 CELF2O95319 508 aaKnown RBP13.56□□□□□ -0.24
RBFOX1-221ENST00000570626 FKBP4Q02790 459 aaKnown RBP eCLIP13.56□□□□□ -0.24
RBFOX1-221ENST00000570626 STYK1Q6J9G0 422 aa13.56□□□□□ -0.24
RBFOX1-221ENST00000570626 PRR5LQ6MZQ0 368 aa13.56□□□□□ -0.24
RBFOX1-221ENST00000570626 C7orf43Q8WVR3 580 aa13.56□□□□□ -0.24
RBFOX1-221ENST00000570626 A0A0C4DFX4 3053 aa13.56□□□□□ -0.24
RBFOX1-221ENST00000570626 CUL9Q8IWT3 2517 aa13.55□□□□□ -0.24
RBFOX1-221ENST00000570626 CCDC93Q567U6 631 aa13.55□□□□□ -0.24
RBFOX1-221ENST00000570626 CTU1Q7Z7A3 348 aaKnown RBP13.55□□□□□ -0.24
RBFOX1-221ENST00000570626 PUS7Q96PZ0 661 aaKnown RBP13.55□□□□□ -0.24
RBFOX1-221ENST00000570626 SCN7AQ01118 1682 aa13.54□□□□□ -0.24
RBFOX1-221ENST00000570626 SRGNP10124 158 aa13.54□□□□□ -0.24
RBFOX1-221ENST00000570626 EPS15P42566 896 aa13.54□□□□□ -0.24
RBFOX1-221ENST00000570626 NOGQ13253 232 aa13.54□□□□□ -0.24
RBFOX1-221ENST00000570626 SAGE1Q9NXZ1 904 aa13.54□□□□□ -0.24
RBFOX1-221ENST00000570626 ZBTB1Q9Y2K1 713 aa13.54□□□□□ -0.24
RBFOX1-221ENST00000570626 COL4A5P29400 1685 aa13.53□□□□□ -0.24
RBFOX1-221ENST00000570626 HSP90AB1P08238 724 aaKnown RBP13.53□□□□□ -0.24
RBFOX1-221ENST00000570626 CYP19A1P11511 503 aaPredicted RBP13.53□□□□□ -0.24
RBFOX1-221ENST00000570626 SCNN1DP51172 638 aa13.53□□□□□ -0.24
RBFOX1-221ENST00000570626 TBC1D9BQ66K14 1250 aa13.53□□□□□ -0.24
RBFOX1-221ENST00000570626 OLFM4Q6UX06 510 aa13.53□□□□□ -0.24
RBFOX1-221ENST00000570626 LMOD1P29536 600 aaPredicted RBP13.52□□□□□ -0.25
RBFOX1-221ENST00000570626 GJA3Q9Y6H8 435 aa13.52□□□□□ -0.25
RBFOX1-221ENST00000570626 PPM1GO15355 546 aaPredicted RBP13.51□□□□□ -0.25
RBFOX1-221ENST00000570626 IARSP41252 1262 aaKnown RBP13.51□□□□□ -0.25
RBFOX1-221ENST00000570626 USP50Q70EL3 339 aaPredicted RBP13.51□□□□□ -0.25
RBFOX1-221ENST00000570626 NFATC2IPQ8NCF5 419 aa13.51□□□□□ -0.25
RBFOX1-221ENST00000570626 MASTLQ96GX5 879 aa13.51□□□□□ -0.25
RBFOX1-221ENST00000570626 SLC17A8Q8NDX2 589 aa13.5□□□□□ -0.25
RBFOX1-221ENST00000570626 GLIS2Q9BZE0 524 aaPredicted RBP13.5□□□□□ -0.25
RBFOX1-221ENST00000570626 ZNF408Q9H9D4 720 aa13.5□□□□□ -0.25
RBFOX1-221ENST00000570626 RNF186Q9NXI6 227 aa13.5□□□□□ -0.25
RBFOX1-221ENST00000570626 WASHC2AQ641Q2 1341 aa13.49□□□□□ -0.25
RBFOX1-221ENST00000570626 TRPA1O75762 1119 aa13.49□□□□□ -0.25
RBFOX1-221ENST00000570626 AKAP4Q5JQC9 854 aa13.49□□□□□ -0.25
RBFOX1-221ENST00000570626 ZNF530Q6P9A1 599 aaPredicted RBP13.49□□□□□ -0.25
RBFOX1-221ENST00000570626 AKAP11Q9UKA4 1901 aa13.49□□□□□ -0.25
RBFOX1-221ENST00000570626 FAM155AB1AL88 458 aaPredicted RBP13.48□□□□□ -0.25
RBFOX1-221ENST00000570626 SYNE4Q8N205 404 aa13.48□□□□□ -0.25
RBFOX1-221ENST00000570626 CNBD1Q8NA66 436 aa13.48□□□□□ -0.25
RBFOX1-221ENST00000570626 SNED1Q8TER0 1413 aa13.47□□□□□ -0.25
RBFOX1-221ENST00000570626 ST20-MTHFSA0A0A6YYL1 179 aa13.47□□□□□ -0.25
RBFOX1-221ENST00000570626 MTHFSP49914 203 aa13.47□□□□□ -0.25
RBFOX1-221ENST00000570626 COL6A3P12111 3177 aa13.47□□□□□ -0.25
RBFOX1-221ENST00000570626 EIF6P56537 245 aaKnown RBP13.46□□□□□ -0.25
RBFOX1-221ENST00000570626 HUNKP57058 714 aa13.46□□□□□ -0.25
RBFOX1-221ENST00000570626 KIF23Q02241 960 aaPredicted RBP13.46□□□□□ -0.25
RBFOX1-221ENST00000570626 RTKN2Q8IZC4 609 aa13.46□□□□□ -0.25
RBFOX1-221ENST00000570626 JDP2Q8WYK2 163 aa13.46□□□□□ -0.25
RBFOX1-221ENST00000570626 CARD11Q9BXL7 1154 aa13.46□□□□□ -0.25
RBFOX1-221ENST00000570626 COLQQ9Y215 455 aaPredicted RBP13.46□□□□□ -0.25
RBFOX1-221ENST00000570626 CANXP27824 592 aaKnown RBP13.45□□□□□ -0.26
RBFOX1-221ENST00000570626 ST5P78524 1137 aa13.45□□□□□ -0.26
RBFOX1-221ENST00000570626 PLEKHO1Q53GL0 409 aaPredicted RBP13.45□□□□□ -0.26
RBFOX1-221ENST00000570626 HTTP42858 3142 aa13.44□□□□□ -0.26
RBFOX1-221ENST00000570626 TRIOBPQ9H2D6 2365 aa13.44□□□□□ -0.26
RBFOX1-221ENST00000570626 NPHP1O15259 732 aa13.44□□□□□ -0.26
RBFOX1-221ENST00000570626 EIF4A2Q14240 407 aaKnown RBP13.44□□□□□ -0.26
RBFOX1-221ENST00000570626 PKN2Q16513 984 aaKnown RBP13.44□□□□□ -0.26
RBFOX1-221ENST00000570626 ADARB2Q9NS39 739 aaKnown RBP13.44□□□□□ -0.26
RBFOX1-221ENST00000570626 NPR1P16066 1061 aa13.43□□□□□ -0.26
RBFOX1-221ENST00000570626 EIF5P55010 431 aaKnown RBP13.43□□□□□ -0.26
RBFOX1-221ENST00000570626 SLC39A6Q13433 755 aa13.42□□□□□ -0.26
RBFOX1-221ENST00000570626 RGMBQ6NW40 437 aa13.42□□□□□ -0.26
RBFOX1-221ENST00000570626 TESK2Q96S53 571 aa13.42□□□□□ -0.26
RBFOX1-221ENST00000570626 PSMD1Q99460 953 aa13.42□□□□□ -0.26
RBFOX1-221ENST00000570626 GPRC5DQ9NZD1 345 aa13.42□□□□□ -0.26
RBFOX1-221ENST00000570626 A0A087WZG4 1122 aa13.41□□□□□ -0.26
RBFOX1-221ENST00000570626 C1orf141Q5JVX7 400 aa13.41□□□□□ -0.26
RBFOX1-221ENST00000570626 DLK2Q6UY11 383 aa13.41□□□□□ -0.26
RBFOX1-221ENST00000570626 SETDB2Q96T68 719 aa13.41□□□□□ -0.26
RBFOX1-221ENST00000570626 PGAP2Q9UHJ9 254 aa13.41□□□□□ -0.26
RBFOX1-221ENST00000570626 TBC1D2BQ9UPU7 963 aa13.41□□□□□ -0.26
RBFOX1-221ENST00000570626 MRC1P22897 1456 aa13.41□□□□□ -0.26
RBFOX1-221ENST00000570626 UBR2Q8IWV8 1755 aa13.4□□□□□ -0.26
RBFOX1-221ENST00000570626 BRCA2P51587 3418 aa13.4□□□□□ -0.26
RBFOX1-221ENST00000570626 AMOTQ4VCS5 1084 aa13.4□□□□□ -0.26
RBFOX1-221ENST00000570626 CSRNP1Q96S65 589 aa13.4□□□□□ -0.26
RBFOX1-221ENST00000570626 PAPPA2Q9BXP8 1791 aa13.4□□□□□ -0.26
RBFOX1-221ENST00000570626 POTEFA5A3E0 1075 aa13.39□□□□□ -0.27
RBFOX1-221ENST00000570626 FBXO46Q6PJ61 603 aaPredicted RBP13.39□□□□□ -0.27
RBFOX1-221ENST00000570626 ZNF296Q8WUU4 475 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms