RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 DICER1Q9UPY3 1922 aaKnown RBP22.47■■□□□ 1.19
MAP1LC3B-208ENST00000570189 ERVV-1B6SEH8 477 aa22.47■■□□□ 1.19
MAP1LC3B-208ENST00000570189 ZEB1P37275 1124 aaPredicted RBP22.47■■□□□ 1.19
MAP1LC3B-208ENST00000570189 ST5P78524 1137 aa22.47■■□□□ 1.19
MAP1LC3B-208ENST00000570189 WDR43Q15061 677 aaKnown RBP eCLIP22.46■■□□□ 1.19
MAP1LC3B-208ENST00000570189 C9orf131Q5VYM1 1079 aa22.46■■□□□ 1.19
MAP1LC3B-208ENST00000570189 CACNA1SQ13698 1873 aa22.45■■□□□ 1.19
MAP1LC3B-208ENST00000570189 KLRG2A4D1S0 409 aaPredicted RBP22.45■■□□□ 1.18
MAP1LC3B-208ENST00000570189 KIF3CO14782 793 aa22.45■■□□□ 1.18
MAP1LC3B-208ENST00000570189 TSPYL4Q9UJ04 414 aa22.45■■□□□ 1.18
MAP1LC3B-208ENST00000570189 TNRC6CQ9HCJ0 1690 aaKnown RBP22.45■■□□□ 1.18
MAP1LC3B-208ENST00000570189 SLX4Q8IY92 1834 aa22.45■■□□□ 1.18
MAP1LC3B-208ENST00000570189 STYK1Q6J9G0 422 aa22.44■■□□□ 1.18
MAP1LC3B-208ENST00000570189 NBPF5PQ86XG9 351 aaPredicted RBP22.44■■□□□ 1.18
MAP1LC3B-208ENST00000570189 IBTKQ9P2D0 1353 aaPredicted RBP22.44■■□□□ 1.18
MAP1LC3B-208ENST00000570189 ADAMTS8Q9UP79 889 aa22.44■■□□□ 1.18
MAP1LC3B-208ENST00000570189 TIAM2Q8IVF5 1701 aa22.43■■□□□ 1.18
MAP1LC3B-208ENST00000570189 MAP3K15Q6ZN16 1313 aa22.43■■□□□ 1.18
MAP1LC3B-208ENST00000570189 SRGNP10124 158 aa22.43■■□□□ 1.18
MAP1LC3B-208ENST00000570189 RIC1Q4ADV7 1423 aa22.42■■□□□ 1.18
MAP1LC3B-208ENST00000570189 TPTE2Q6XPS3 522 aa22.42■■□□□ 1.18
MAP1LC3B-208ENST00000570189 ZNF526Q8TF50 670 aaPredicted RBP22.42■■□□□ 1.18
MAP1LC3B-208ENST00000570189 CNKSR1Q969H4 720 aa22.42■■□□□ 1.18
MAP1LC3B-208ENST00000570189 TRIM35Q9UPQ4 493 aa22.42■■□□□ 1.18
MAP1LC3B-208ENST00000570189 NIP7Q9Y221 180 aaKnown RBP eCLIP22.42■■□□□ 1.18
MAP1LC3B-208ENST00000570189 CHL1O00533 1208 aa22.41■■□□□ 1.18
MAP1LC3B-208ENST00000570189 LMNB1P20700 586 aa22.41■■□□□ 1.18
MAP1LC3B-208ENST00000570189 HLFQ16534 295 aa22.41■■□□□ 1.18
MAP1LC3B-208ENST00000570189 LRP10Q7Z4F1 713 aa22.41■■□□□ 1.18
MAP1LC3B-208ENST00000570189 MASTLQ96GX5 879 aa22.41■■□□□ 1.18
MAP1LC3B-208ENST00000570189 RNF181Q9P0P0 153 aa22.41■■□□□ 1.18
MAP1LC3B-208ENST00000570189 ANKRD36CQ5JPF3 1778 aa22.4■■□□□ 1.18
MAP1LC3B-208ENST00000570189 LTBP3Q9NS15 1303 aa22.4■■□□□ 1.18
MAP1LC3B-208ENST00000570189 CCDC146Q8IYE0 955 aa22.4■■□□□ 1.18
MAP1LC3B-208ENST00000570189 NPHP1O15259 732 aa22.39■■□□□ 1.17
MAP1LC3B-208ENST00000570189 KIF6Q6ZMV9 814 aa22.39■■□□□ 1.17
MAP1LC3B-208ENST00000570189 ZNF622Q969S3 477 aaKnown RBP eCLIP22.39■■□□□ 1.175e-7■□□□□ 9.2
MAP1LC3B-208ENST00000570189 SENP3-EIF4A1A0A087X0R7 540 aa22.38■■□□□ 1.17
MAP1LC3B-208ENST00000570189 NFKBIEO00221 500 aa22.38■■□□□ 1.17
MAP1LC3B-208ENST00000570189 PDIA6Q15084 440 aa22.38■■□□□ 1.17
MAP1LC3B-208ENST00000570189 SOGA3Q5TF21 947 aa22.38■■□□□ 1.17
MAP1LC3B-208ENST00000570189 CCDC24Q8N4L8 307 aa22.38■■□□□ 1.17
MAP1LC3B-208ENST00000570189 RRP7AQ9Y3A4 280 aaKnown RBP22.38■■□□□ 1.17
MAP1LC3B-208ENST00000570189 KDM2BQ8NHM5 1336 aa22.37■■□□□ 1.17
MAP1LC3B-208ENST00000570189 PRELPP51888 382 aa22.37■■□□□ 1.17
MAP1LC3B-208ENST00000570189 RASSF7Q02833 373 aa22.37■■□□□ 1.17
MAP1LC3B-208ENST00000570189 TTLL7Q6ZT98 887 aa22.37■■□□□ 1.17
MAP1LC3B-208ENST00000570189 NYXQ9GZU5 481 aa22.37■■□□□ 1.17
MAP1LC3B-208ENST00000570189 HOXB7P09629 217 aa22.36■■□□□ 1.17
MAP1LC3B-208ENST00000570189 NPR1P16066 1061 aa22.36■■□□□ 1.17
MAP1LC3B-208ENST00000570189 GIGYF2Q6Y7W6 1299 aaKnown RBP22.36■■□□□ 1.17
MAP1LC3B-208ENST00000570189 CEP350Q5VT06 3117 aa22.36■■□□□ 1.17
MAP1LC3B-208ENST00000570189 TOMM70O94826 608 aa22.35■■□□□ 1.17
MAP1LC3B-208ENST00000570189 MYL6BP14649 208 aa22.35■■□□□ 1.17
MAP1LC3B-208ENST00000570189 NEUROD2Q15784 382 aa22.35■■□□□ 1.17
MAP1LC3B-208ENST00000570189 PRPF40BQ6NWY9 871 aaKnown RBP22.35■■□□□ 1.17
MAP1LC3B-208ENST00000570189 ZNF34Q8IZ26 560 aa22.35■■□□□ 1.17
MAP1LC3B-208ENST00000570189 C21orf2O43822 256 aa22.34■■□□□ 1.17
MAP1LC3B-208ENST00000570189 CRY2Q49AN0 593 aa22.34■■□□□ 1.17
MAP1LC3B-208ENST00000570189 C7orf43Q8WVR3 580 aa22.34■■□□□ 1.17
MAP1LC3B-208ENST00000570189 CFAP44Q96MT7 982 aa22.34■■□□□ 1.17
MAP1LC3B-208ENST00000570189 NMRK2Q9NPI5 230 aa22.34■■□□□ 1.17
MAP1LC3B-208ENST00000570189 UBN2Q6ZU65 1347 aa22.33■■□□□ 1.17
MAP1LC3B-208ENST00000570189 WDR90Q96KV7 1748 aa22.32■■□□□ 1.16
MAP1LC3B-208ENST00000570189 HSPA6P17066 643 aa22.32■■□□□ 1.16
MAP1LC3B-208ENST00000570189 NGEFQ8N5V2 710 aa22.32■■□□□ 1.16
MAP1LC3B-208ENST00000570189 ABCC12Q96J65 1359 aa22.31■■□□□ 1.16
MAP1LC3B-208ENST00000570189 GLTPD2A6NH11 291 aa22.31■■□□□ 1.16
MAP1LC3B-208ENST00000570189 ZNF853P0CG23 659 aa22.31■■□□□ 1.16
MAP1LC3B-208ENST00000570189 EIF2S2P20042 333 aaKnown RBP22.31■■□□□ 1.16
MAP1LC3B-208ENST00000570189 PARP10Q53GL7 1025 aa22.31■■□□□ 1.16
MAP1LC3B-208ENST00000570189 TAOK3Q9H2K8 898 aa22.31■■□□□ 1.16
MAP1LC3B-208ENST00000570189 ZBTB3Q9H5J0 574 aa22.31■■□□□ 1.16
MAP1LC3B-208ENST00000570189 DDX21Q9NR30 783 aaKnown RBP eCLIP22.31■■□□□ 1.16
MAP1LC3B-208ENST00000570189 RNF123Q5XPI4 1314 aa22.31■■□□□ 1.16
MAP1LC3B-208ENST00000570189 ALDH1B1P30837 517 aa22.3■■□□□ 1.16
MAP1LC3B-208ENST00000570189 PROSER3Q2NL68 480 aa22.3■■□□□ 1.16
MAP1LC3B-208ENST00000570189 RBM46Q8TBY0 533 aaKnown RBP22.3■■□□□ 1.16
MAP1LC3B-208ENST00000570189 NTSR2O95665 410 aa22.29■■□□□ 1.16
MAP1LC3B-208ENST00000570189 CALD1Q05682 793 aaKnown RBP22.29■■□□□ 1.16
MAP1LC3B-208ENST00000570189 SNED1Q8TER0 1413 aa22.29■■□□□ 1.16
MAP1LC3B-208ENST00000570189 GTF2E1P29083 439 aaPredicted RBP22.28■■□□□ 1.16
MAP1LC3B-208ENST00000570189 HOXA10P31260 410 aaPredicted RBP22.28■■□□□ 1.16
MAP1LC3B-208ENST00000570189 IFT57Q9NWB7 429 aa22.28■■□□□ 1.16
MAP1LC3B-208ENST00000570189 APAF1O14727 1248 aa22.27■■□□□ 1.16
MAP1LC3B-208ENST00000570189 ERFEQ4G0M1 354 aa22.27■■□□□ 1.16
MAP1LC3B-208ENST00000570189 CCDC93Q567U6 631 aa22.27■■□□□ 1.16
MAP1LC3B-208ENST00000570189 HSP90AB3PQ58FF7 597 aa22.27■■□□□ 1.16
MAP1LC3B-208ENST00000570189 SUSD4Q5VX71 490 aa22.27■■□□□ 1.16
MAP1LC3B-208ENST00000570189 PPP1R42Q7Z4L9 355 aa22.27■■□□□ 1.16
MAP1LC3B-208ENST00000570189 LAMB2P55268 1798 aa22.27■■□□□ 1.16
MAP1LC3B-208ENST00000570189 FAM177BA6PVY3 158 aa22.26■■□□□ 1.15
MAP1LC3B-208ENST00000570189 KRT24Q2M2I5 525 aa22.26■■□□□ 1.15
MAP1LC3B-208ENST00000570189 NCBP3Q53F19 620 aaKnown RBP22.26■■□□□ 1.15
MAP1LC3B-208ENST00000570189 NUTM1Q86Y26 1132 aa22.26■■□□□ 1.15
MAP1LC3B-208ENST00000570189 GPTP24298 496 aa22.25■■□□□ 1.15
MAP1LC3B-208ENST00000570189 GNAI1P63096 354 aa22.25■■□□□ 1.15
MAP1LC3B-208ENST00000570189 FSTL1Q12841 308 aa22.25■■□□□ 1.15
MAP1LC3B-208ENST00000570189 SLC10A5Q5PT55 438 aa22.25■■□□□ 1.15
MAP1LC3B-208ENST00000570189 COPS6Q7L5N1 327 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms