RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 DUSP27Q5VZP5 1158 aa14.4□□□□□ -0.1
SHCBP1-207ENST00000569702 TTLL7Q6ZT98 887 aa14.4□□□□□ -0.1
SHCBP1-207ENST00000569702 NGEFQ8N5V2 710 aa14.4□□□□□ -0.1
SHCBP1-207ENST00000569702 SETDB2Q96T68 719 aa14.4□□□□□ -0.1
SHCBP1-207ENST00000569702 MAP3K15Q6ZN16 1313 aa14.4□□□□□ -0.1
SHCBP1-207ENST00000569702 DPEP1P16444 411 aa14.39□□□□□ -0.11
SHCBP1-207ENST00000569702 PELP1Q8IZL8 1130 aaKnown RBP14.39□□□□□ -0.11
SHCBP1-207ENST00000569702 DDX21Q9NR30 783 aaKnown RBP eCLIP14.39□□□□□ -0.11
SHCBP1-207ENST00000569702 GRIN3BO60391 1043 aa14.38□□□□□ -0.11
SHCBP1-207ENST00000569702 ANXA1P04083 346 aa14.38□□□□□ -0.11
SHCBP1-207ENST00000569702 HDGFL1Q5TGJ6 251 aa14.38□□□□□ -0.11
SHCBP1-207ENST00000569702 WDR63Q8IWG1 891 aa14.38□□□□□ -0.11
SHCBP1-207ENST00000569702 NECTIN2Q92692 538 aa14.38□□□□□ -0.11
SHCBP1-207ENST00000569702 N4BP2Q86UW6 1770 aaPredicted RBP14.37□□□□□ -0.11
SHCBP1-207ENST00000569702 PRR5LQ6MZQ0 368 aa14.37□□□□□ -0.11
SHCBP1-207ENST00000569702 KIF6Q6ZMV9 814 aa14.37□□□□□ -0.11
SHCBP1-207ENST00000569702 C8orf58Q8NAV2 365 aa14.37□□□□□ -0.11
SHCBP1-207ENST00000569702 CHPF2Q9P2E5 772 aa14.37□□□□□ -0.11
SHCBP1-207ENST00000569702 GIGYF2Q6Y7W6 1299 aaKnown RBP14.36□□□□□ -0.11
SHCBP1-207ENST00000569702 COPS6Q7L5N1 327 aa14.36□□□□□ -0.11
SHCBP1-207ENST00000569702 TSR2Q969E8 191 aaKnown RBP14.36□□□□□ -0.11
SHCBP1-207ENST00000569702 BRIP1Q9BX63 1249 aa14.36□□□□□ -0.11
SHCBP1-207ENST00000569702 ZBTB3Q9H5J0 574 aa14.36□□□□□ -0.11
SHCBP1-207ENST00000569702 DBF4Q9UBU7 674 aaPredicted RBP14.36□□□□□ -0.11
SHCBP1-207ENST00000569702 NIP7Q9Y221 180 aaKnown RBP eCLIP14.36□□□□□ -0.11
SHCBP1-207ENST00000569702 SALL2Q9Y467 1007 aaPredicted RBP14.36□□□□□ -0.11
SHCBP1-207ENST00000569702 BRCA1P38398 1863 aaKnown RBP14.35□□□□□ -0.11
SHCBP1-207ENST00000569702 ATP10DQ9P241 1426 aa14.35□□□□□ -0.11
SHCBP1-207ENST00000569702 ELL2O00472 640 aaPredicted RBP14.35□□□□□ -0.11
SHCBP1-207ENST00000569702 CHRNA5P30532 468 aa14.35□□□□□ -0.11
SHCBP1-207ENST00000569702 DIEXFQ68CQ4 756 aaKnown RBP14.35□□□□□ -0.11
SHCBP1-207ENST00000569702 CNBD1Q8NA66 436 aa14.35□□□□□ -0.11
SHCBP1-207ENST00000569702 XAGE3Q8WTP9 111 aa14.35□□□□□ -0.11
SHCBP1-207ENST00000569702 PIM2Q9P1W9 311 aa14.35□□□□□ -0.11
SHCBP1-207ENST00000569702 WWC3Q9ULE0 1092 aa14.35□□□□□ -0.11
SHCBP1-207ENST00000569702 NUP98P52948 1817 aa14.35□□□□□ -0.11
SHCBP1-207ENST00000569702 NBPF5PQ86XG9 351 aaPredicted RBP14.34□□□□□ -0.11
SHCBP1-207ENST00000569702 ZNF34Q8IZ26 560 aa14.34□□□□□ -0.11
SHCBP1-207ENST00000569702 TSPYL6Q8N831 410 aa14.34□□□□□ -0.11
SHCBP1-207ENST00000569702 ZNF521Q96K83 1311 aa14.34□□□□□ -0.11
SHCBP1-207ENST00000569702 CHD4Q14839 1912 aa14.33□□□□□ -0.11
SHCBP1-207ENST00000569702 YY1P25490 414 aa14.33□□□□□ -0.12
SHCBP1-207ENST00000569702 PDE6BP35913 854 aa14.33□□□□□ -0.12
SHCBP1-207ENST00000569702 TPTE2Q6XPS3 522 aa14.33□□□□□ -0.12
SHCBP1-207ENST00000569702 CCDC24Q8N4L8 307 aa14.33□□□□□ -0.12
SHCBP1-207ENST00000569702 CHMP4AQ9BY43 222 aa14.33□□□□□ -0.12
SHCBP1-207ENST00000569702 HYPKQ9NX55 129 aa14.33□□□□□ -0.12
SHCBP1-207ENST00000569702 PDZRN3Q9UPQ7 1066 aa14.33□□□□□ -0.12
SHCBP1-207ENST00000569702 BCS1LQ9Y276 419 aa14.33□□□□□ -0.12
SHCBP1-207ENST00000569702 UBN2Q6ZU65 1347 aa14.33□□□□□ -0.12
SHCBP1-207ENST00000569702 ANKRD31Q8N7Z5 1873 aa14.33□□□□□ -0.12
SHCBP1-207ENST00000569702 H0YIN7 160 aa14.32□□□□□ -0.12
SHCBP1-207ENST00000569702 ST5P78524 1137 aa14.32□□□□□ -0.12
SHCBP1-207ENST00000569702 AIMP1Q12904 312 aaKnown RBP14.32□□□□□ -0.12
SHCBP1-207ENST00000569702 DALRD3Q5D0E6 543 aaKnown RBP14.32□□□□□ -0.12
SHCBP1-207ENST00000569702 C2CD5Q86YS7 1000 aa14.32□□□□□ -0.12
SHCBP1-207ENST00000569702 SPINK5Q9NQ38 1064 aaPredicted RBP14.32□□□□□ -0.12
SHCBP1-207ENST00000569702 FANCIQ9NVI1 1328 aa14.32□□□□□ -0.12
SHCBP1-207ENST00000569702 KLRG2A4D1S0 409 aaPredicted RBP14.31□□□□□ -0.12
SHCBP1-207ENST00000569702 NPHP1O15259 732 aa14.31□□□□□ -0.12
SHCBP1-207ENST00000569702 GPTP24298 496 aa14.31□□□□□ -0.12
SHCBP1-207ENST00000569702 CCDC30Q5VVM6 783 aa14.31□□□□□ -0.12
SHCBP1-207ENST00000569702 IBTKQ9P2D0 1353 aaPredicted RBP14.31□□□□□ -0.12
SHCBP1-207ENST00000569702 DLEC1Q9Y238 1755 aa14.3□□□□□ -0.12
SHCBP1-207ENST00000569702 TCIRG1Q13488 830 aa14.3□□□□□ -0.12
SHCBP1-207ENST00000569702 TWISTNBQ3B726 338 aaPredicted RBP14.3□□□□□ -0.12
SHCBP1-207ENST00000569702 PARP10Q53GL7 1025 aa14.3□□□□□ -0.12
SHCBP1-207ENST00000569702 HSP90AB3PQ58FF7 597 aa14.3□□□□□ -0.12
SHCBP1-207ENST00000569702 SUSD4Q5VX71 490 aa14.3□□□□□ -0.12
SHCBP1-207ENST00000569702 ANKRD13DQ6ZTN6 518 aa14.3□□□□□ -0.12
SHCBP1-207ENST00000569702 MIER1Q8N108 512 aa14.3□□□□□ -0.12
SHCBP1-207ENST00000569702 PLBD2Q8NHP8 589 aa14.3□□□□□ -0.12
SHCBP1-207ENST00000569702 NYXQ9GZU5 481 aa14.3□□□□□ -0.12
SHCBP1-207ENST00000569702 ARFGEF1Q9Y6D6 1849 aa14.29□□□□□ -0.12
SHCBP1-207ENST00000569702 FAM177BA6PVY3 158 aa14.29□□□□□ -0.12
SHCBP1-207ENST00000569702 SRGNP10124 158 aa14.29□□□□□ -0.12
SHCBP1-207ENST00000569702 GOLGA2Q08379 1002 aa14.29□□□□□ -0.12
SHCBP1-207ENST00000569702 TTLL6Q8N841 843 aa14.29□□□□□ -0.12
SHCBP1-207ENST00000569702 PHAXQ9H814 394 aaKnown RBP14.29□□□□□ -0.12
SHCBP1-207ENST00000569702 NTSR2O95665 410 aa14.28□□□□□ -0.12
SHCBP1-207ENST00000569702 NUTM1Q86Y26 1132 aa14.28□□□□□ -0.12
SHCBP1-207ENST00000569702 MYH16Q9H6N6 1097 aa14.28□□□□□ -0.12
SHCBP1-207ENST00000569702 COL11A2P13942 1736 aaPredicted RBP14.27□□□□□ -0.12
SHCBP1-207ENST00000569702 RIC1Q4ADV7 1423 aa14.27□□□□□ -0.12
SHCBP1-207ENST00000569702 ABCC12Q96J65 1359 aa14.27□□□□□ -0.12
SHCBP1-207ENST00000569702 VAMP4O75379 141 aa14.27□□□□□ -0.13
SHCBP1-207ENST00000569702 GTF2E1P29083 439 aaPredicted RBP14.27□□□□□ -0.13
SHCBP1-207ENST00000569702 EXOSC9Q06265 439 aaKnown RBP14.27□□□□□ -0.13
SHCBP1-207ENST00000569702 ERFEQ4G0M1 354 aa14.27□□□□□ -0.13
SHCBP1-207ENST00000569702 STYK1Q6J9G0 422 aa14.27□□□□□ -0.13
SHCBP1-207ENST00000569702 PPP1R42Q7Z4L9 355 aa14.27□□□□□ -0.13
SHCBP1-207ENST00000569702 NLRP10Q86W26 655 aa14.27□□□□□ -0.13
SHCBP1-207ENST00000569702 MASTLQ96GX5 879 aa14.27□□□□□ -0.13
SHCBP1-207ENST00000569702 RNF123Q5XPI4 1314 aa14.26□□□□□ -0.13
SHCBP1-207ENST00000569702 CRY2Q49AN0 593 aa14.26□□□□□ -0.13
SHCBP1-207ENST00000569702 SLC10A5Q5PT55 438 aa14.26□□□□□ -0.13
SHCBP1-207ENST00000569702 ARHGAP27Q6ZUM4 889 aa14.26□□□□□ -0.13
SHCBP1-207ENST00000569702 ZNF622Q969S3 477 aaKnown RBP eCLIP14.26□□□□□ -0.13
SHCBP1-207ENST00000569702 ISCA1Q9BUE6 129 aa14.26□□□□□ -0.13
SHCBP1-207ENST00000569702 UTP14AQ9BVJ6 771 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms