RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 WDR63Q8IWG1 891 aa12.18□□□□□ -0.46
UBR1-210ENST00000569337 H0YIN7 160 aa12.17□□□□□ -0.46
UBR1-210ENST00000569337 RGL2O15211 777 aa12.17□□□□□ -0.46
UBR1-210ENST00000569337 CALD1Q05682 793 aaKnown RBP12.17□□□□□ -0.46
UBR1-210ENST00000569337 ARHGAP27Q6ZUM4 889 aa12.17□□□□□ -0.46
UBR1-210ENST00000569337 CNBD1Q8NA66 436 aa12.17□□□□□ -0.46
UBR1-210ENST00000569337 CFAP44Q96MT7 982 aa12.17□□□□□ -0.46
UBR1-210ENST00000569337 IL16Q14005 1332 aa12.16□□□□□ -0.46
UBR1-210ENST00000569337 ERBB4Q15303 1308 aa12.16□□□□□ -0.46
UBR1-210ENST00000569337 ERVV-1B6SEH8 477 aa12.16□□□□□ -0.46
UBR1-210ENST00000569337 PDE6BP35913 854 aa12.16□□□□□ -0.46
UBR1-210ENST00000569337 ST5P78524 1137 aa12.16□□□□□ -0.46
UBR1-210ENST00000569337 SLFN5Q08AF3 891 aa12.16□□□□□ -0.46
UBR1-210ENST00000569337 HLFQ16534 295 aa12.16□□□□□ -0.46
UBR1-210ENST00000569337 PRR5LQ6MZQ0 368 aa12.16□□□□□ -0.46
UBR1-210ENST00000569337 KIF6Q6ZMV9 814 aa12.16□□□□□ -0.46
UBR1-210ENST00000569337 NBPF5PQ86XG9 351 aaPredicted RBP12.16□□□□□ -0.46
UBR1-210ENST00000569337 C2CD5Q86YS7 1000 aa12.16□□□□□ -0.46
UBR1-210ENST00000569337 TRMT2AQ8IZ69 625 aaKnown RBP12.16□□□□□ -0.46
UBR1-210ENST00000569337 CCDC24Q8N4L8 307 aa12.16□□□□□ -0.46
UBR1-210ENST00000569337 NECTIN2Q92692 538 aa12.16□□□□□ -0.46
UBR1-210ENST00000569337 BRIP1Q9BX63 1249 aa12.16□□□□□ -0.46
UBR1-210ENST00000569337 NIP7Q9Y221 180 aaKnown RBP eCLIP12.16□□□□□ -0.46
UBR1-210ENST00000569337 GOLGA2Q08379 1002 aa12.15□□□□□ -0.46
UBR1-210ENST00000569337 TPTE2Q6XPS3 522 aa12.15□□□□□ -0.46
UBR1-210ENST00000569337 TTLL7Q6ZT98 887 aa12.15□□□□□ -0.46
UBR1-210ENST00000569337 TSR2Q969E8 191 aaKnown RBP12.15□□□□□ -0.46
UBR1-210ENST00000569337 MBIPQ9NS73 344 aa12.15□□□□□ -0.46
UBR1-210ENST00000569337 IFT57Q9NWB7 429 aa12.15□□□□□ -0.46
UBR1-210ENST00000569337 PDZRN3Q9UPQ7 1066 aa12.15□□□□□ -0.46
UBR1-210ENST00000569337 MAP3K15Q6ZN16 1313 aa12.14□□□□□ -0.47
UBR1-210ENST00000569337 FAM177BA6PVY3 158 aa12.14□□□□□ -0.47
UBR1-210ENST00000569337 GTF2E1P29083 439 aaPredicted RBP12.14□□□□□ -0.47
UBR1-210ENST00000569337 GNAI1P63096 354 aa12.14□□□□□ -0.47
UBR1-210ENST00000569337 PDIA6Q15084 440 aa12.14□□□□□ -0.47
UBR1-210ENST00000569337 KRT24Q2M2I5 525 aa12.14□□□□□ -0.47
UBR1-210ENST00000569337 TTLL6Q8N841 843 aa12.14□□□□□ -0.47
UBR1-210ENST00000569337 ZBTB3Q9H5J0 574 aa12.14□□□□□ -0.47
UBR1-210ENST00000569337 FANCIQ9NVI1 1328 aa12.13□□□□□ -0.47
UBR1-210ENST00000569337 ANXA1P04083 346 aa12.13□□□□□ -0.47
UBR1-210ENST00000569337 KCNA4P22459 653 aa12.13□□□□□ -0.47
UBR1-210ENST00000569337 DUSP27Q5VZP5 1158 aa12.13□□□□□ -0.47
UBR1-210ENST00000569337 ZNF622Q969S3 477 aaKnown RBP eCLIP12.13□□□□□ -0.473e-7■■■■□ 21.4
UBR1-210ENST00000569337 KIF13BQ9NQT8 1826 aa12.13□□□□□ -0.47
UBR1-210ENST00000569337 E9PSI1 815 aa12.12□□□□□ -0.47
UBR1-210ENST00000569337 HOXB7P09629 217 aa12.12□□□□□ -0.47
UBR1-210ENST00000569337 AIMP1Q12904 312 aaKnown RBP12.12□□□□□ -0.47
UBR1-210ENST00000569337 PROSER3Q2NL68 480 aa12.12□□□□□ -0.47
UBR1-210ENST00000569337 HDGFL1Q5TGJ6 251 aa12.12□□□□□ -0.47
UBR1-210ENST00000569337 GIGYF2Q6Y7W6 1299 aaKnown RBP12.12□□□□□ -0.47
UBR1-210ENST00000569337 NYXQ9GZU5 481 aa12.12□□□□□ -0.47
UBR1-210ENST00000569337 DDX21Q9NR30 783 aaKnown RBP eCLIP12.12□□□□□ -0.47
UBR1-210ENST00000569337 N4BP2Q86UW6 1770 aaPredicted RBP12.11□□□□□ -0.47
UBR1-210ENST00000569337 SCN7AQ01118 1682 aa12.11□□□□□ -0.47
UBR1-210ENST00000569337 GPTP24298 496 aa12.11□□□□□ -0.47
UBR1-210ENST00000569337 COPS6Q7L5N1 327 aa12.11□□□□□ -0.47
UBR1-210ENST00000569337 LRP10Q7Z4F1 713 aa12.11□□□□□ -0.47
UBR1-210ENST00000569337 ELL2O00472 640 aaPredicted RBP12.1□□□□□ -0.47
UBR1-210ENST00000569337 SRGNP10124 158 aa12.1□□□□□ -0.47
UBR1-210ENST00000569337 EXOSC9Q06265 439 aaKnown RBP12.1□□□□□ -0.47
UBR1-210ENST00000569337 TSPYL6Q8N831 410 aa12.1□□□□□ -0.47
UBR1-210ENST00000569337 C8orf58Q8NAV2 365 aa12.1□□□□□ -0.47
UBR1-210ENST00000569337 XAGE3Q8WTP9 111 aa12.1□□□□□ -0.47
UBR1-210ENST00000569337 CNKSR1Q969H4 720 aa12.1□□□□□ -0.47
UBR1-210ENST00000569337 MASTLQ96GX5 879 aa12.1□□□□□ -0.47
UBR1-210ENST00000569337 CHPF2Q9P2E5 772 aa12.1□□□□□ -0.47
UBR1-210ENST00000569337 DBF4Q9UBU7 674 aaPredicted RBP12.1□□□□□ -0.47
UBR1-210ENST00000569337 KIAA1551Q9HCM1 1747 aa12.1□□□□□ -0.47
UBR1-210ENST00000569337 NRXN2Q9P2S2 1712 aa12.1□□□□□ -0.47
UBR1-210ENST00000569337 PARP10Q53GL7 1025 aa12.09□□□□□ -0.47
UBR1-210ENST00000569337 C9orf131Q5VYM1 1079 aa12.09□□□□□ -0.47
UBR1-210ENST00000569337 STYK1Q6J9G0 422 aa12.09□□□□□ -0.47
UBR1-210ENST00000569337 PPP1R42Q7Z4L9 355 aa12.09□□□□□ -0.47
UBR1-210ENST00000569337 ZNF34Q8IZ26 560 aa12.09□□□□□ -0.47
UBR1-210ENST00000569337 ZNF526Q8TF50 670 aaPredicted RBP12.09□□□□□ -0.47
UBR1-210ENST00000569337 MYH16Q9H6N6 1097 aa12.09□□□□□ -0.47
UBR1-210ENST00000569337 GPBP1L1Q9HC44 474 aaPredicted RBP12.09□□□□□ -0.47
UBR1-210ENST00000569337 ZNF219Q9P2Y4 722 aaPredicted RBP12.09□□□□□ -0.47
UBR1-210ENST00000569337 ATP10DQ9P241 1426 aa12.09□□□□□ -0.47
UBR1-210ENST00000569337 CHD4Q14839 1912 aa12.09□□□□□ -0.47
UBR1-210ENST00000569337 LAMB4A4D0S4 1761 aa12.08□□□□□ -0.48
UBR1-210ENST00000569337 KLRG2A4D1S0 409 aaPredicted RBP12.08□□□□□ -0.48
UBR1-210ENST00000569337 C21orf2O43822 256 aa12.08□□□□□ -0.48
UBR1-210ENST00000569337 NPR1P16066 1061 aa12.08□□□□□ -0.48
UBR1-210ENST00000569337 HSP90AB3PQ58FF7 597 aa12.08□□□□□ -0.48
UBR1-210ENST00000569337 SUSD4Q5VX71 490 aa12.08□□□□□ -0.48
UBR1-210ENST00000569337 NUTM1Q86Y26 1132 aa12.08□□□□□ -0.48
UBR1-210ENST00000569337 CHMP4AQ9BY43 222 aa12.08□□□□□ -0.48
UBR1-210ENST00000569337 HYPKQ9NX55 129 aa12.08□□□□□ -0.48
UBR1-210ENST00000569337 UBN2Q6ZU65 1347 aa12.08□□□□□ -0.48
UBR1-210ENST00000569337 ADCY9O60503 1353 aa12.07□□□□□ -0.48
UBR1-210ENST00000569337 AFDNP55196 1824 aaKnown RBP12.07□□□□□ -0.48
UBR1-210ENST00000569337 ERFEQ4G0M1 354 aa12.07□□□□□ -0.48
UBR1-210ENST00000569337 ANKRD13DQ6ZTN6 518 aa12.07□□□□□ -0.48
UBR1-210ENST00000569337 RNF181Q9P0P0 153 aa12.07□□□□□ -0.48
UBR1-210ENST00000569337 BCORQ6W2J9 1755 aa12.07□□□□□ -0.48
UBR1-210ENST00000569337 ALDH1B1P30837 517 aa12.06□□□□□ -0.48
UBR1-210ENST00000569337 RASSF7Q02833 373 aa12.06□□□□□ -0.48
UBR1-210ENST00000569337 TCIRG1Q13488 830 aa12.06□□□□□ -0.48
UBR1-210ENST00000569337 PRPF40BQ6NWY9 871 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms