RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 CNTNAP4Q9C0A0 1308 aa20.55■□□□□ 0.88
USB1-215ENST00000569252 A1BGP04217 495 aa20.55■□□□□ 0.88
USB1-215ENST00000569252 ZNF330Q9Y3S2 320 aaPredicted RBP20.55■□□□□ 0.88
USB1-215ENST00000569252 ERBB4Q15303 1308 aa20.54■□□□□ 0.88
USB1-215ENST00000569252 UBR2Q8IWV8 1755 aa20.54■□□□□ 0.88
USB1-215ENST00000569252 A0A087WZG4 1122 aa20.53■□□□□ 0.88
USB1-215ENST00000569252 MYL6BP14649 208 aa20.53■□□□□ 0.88
USB1-215ENST00000569252 KCNA3P22001 575 aa20.53■□□□□ 0.88
USB1-215ENST00000569252 INTS5Q6P9B9 1019 aaKnown RBP20.53■□□□□ 0.88
USB1-215ENST00000569252 TJP1Q07157 1748 aa20.53■□□□□ 0.88
USB1-215ENST00000569252 RPS6KA4O75676 772 aa20.52■□□□□ 0.88
USB1-215ENST00000569252 IL6STP40189 918 aaPredicted RBP20.52■□□□□ 0.88
USB1-215ENST00000569252 DDR1Q08345 913 aa20.52■□□□□ 0.88
USB1-215ENST00000569252 FKBP8Q14318 412 aa20.52■□□□□ 0.88
USB1-215ENST00000569252 DDX21Q9NR30 783 aaKnown RBP eCLIP20.52■□□□□ 0.88
USB1-215ENST00000569252 HYPKQ9NX55 129 aa20.52■□□□□ 0.88
USB1-215ENST00000569252 ZNF831Q5JPB2 1677 aa20.51■□□□□ 0.87
USB1-215ENST00000569252 CHRNA5P30532 468 aa20.51■□□□□ 0.87
USB1-215ENST00000569252 RFC4P35249 363 aa20.51■□□□□ 0.87
USB1-215ENST00000569252 ZBTB1Q9Y2K1 713 aa20.51■□□□□ 0.87
USB1-215ENST00000569252 SLC4A2P04920 1241 aa20.5■□□□□ 0.87
USB1-215ENST00000569252 TGFB2P61812 414 aa20.5■□□□□ 0.87
USB1-215ENST00000569252 C9orf131Q5VYM1 1079 aa20.5■□□□□ 0.87
USB1-215ENST00000569252 NLGN1Q8N2Q7 840 aa20.5■□□□□ 0.87
USB1-215ENST00000569252 CHPF2Q9P2E5 772 aa20.5■□□□□ 0.87
USB1-215ENST00000569252 PARP3Q9Y6F1 533 aa20.5■□□□□ 0.87
USB1-215ENST00000569252 TCERG1O14776 1098 aaKnown RBP20.49■□□□□ 0.87
USB1-215ENST00000569252 ADRA2BP18089 450 aa20.49■□□□□ 0.87
USB1-215ENST00000569252 ALDH1L2Q3SY69 923 aa20.49■□□□□ 0.87
USB1-215ENST00000569252 ZPR1O75312 459 aa20.48■□□□□ 0.87
USB1-215ENST00000569252 PIP4K2AP48426 406 aaPredicted RBP20.48■□□□□ 0.87
USB1-215ENST00000569252 KIF6Q6ZMV9 814 aa20.48■□□□□ 0.87
USB1-215ENST00000569252 DNAJC5GQ8N7S2 189 aa20.48■□□□□ 0.87
USB1-215ENST00000569252 DDX58O95786 925 aaKnown RBP20.47■□□□□ 0.87
USB1-215ENST00000569252 EIF5P55010 431 aaKnown RBP20.47■□□□□ 0.87
USB1-215ENST00000569252 AIMP1Q12904 312 aaKnown RBP20.47■□□□□ 0.87
USB1-215ENST00000569252 SMC4Q9NTJ3 1288 aa20.47■□□□□ 0.87
USB1-215ENST00000569252 NBPF26B4DH59 902 aa20.46■□□□□ 0.87
USB1-215ENST00000569252 TOMM70O94826 608 aa20.46■□□□□ 0.87
USB1-215ENST00000569252 NBPF10Q6P3W6 841 aaKnown RBP20.46■□□□□ 0.87
USB1-215ENST00000569252 NBPF15Q8N660 670 aa20.46■□□□□ 0.87
USB1-215ENST00000569252 WDR90Q96KV7 1748 aa20.46■□□□□ 0.87
USB1-215ENST00000569252 ARFGEF1Q9Y6D6 1849 aa20.46■□□□□ 0.87
USB1-215ENST00000569252 ANXA1P04083 346 aa20.45■□□□□ 0.86
USB1-215ENST00000569252 APLP1P51693 650 aa20.45■□□□□ 0.86
USB1-215ENST00000569252 COPS6Q7L5N1 327 aa20.45■□□□□ 0.86
USB1-215ENST00000569252 RARSP54136 660 aaKnown RBP20.44■□□□□ 0.86
USB1-215ENST00000569252 RASSF7Q02833 373 aa20.44■□□□□ 0.86
USB1-215ENST00000569252 PDIA6Q15084 440 aa20.44■□□□□ 0.86
USB1-215ENST00000569252 DZIP3Q86Y13 1208 aaKnown RBP20.44■□□□□ 0.86
USB1-215ENST00000569252 SSH1Q8WYL5 1049 aa20.44■□□□□ 0.86
USB1-215ENST00000569252 USP42Q9H9J4 1324 aaKnown RBP20.44■□□□□ 0.86
USB1-215ENST00000569252 PROSER3Q2NL68 480 aa20.43■□□□□ 0.86
USB1-215ENST00000569252 XAGE3Q8WTP9 111 aa20.43■□□□□ 0.86
USB1-215ENST00000569252 RNF181Q9P0P0 153 aa20.43■□□□□ 0.86
USB1-215ENST00000569252 RCAN3Q9UKA8 241 aa20.43■□□□□ 0.86
USB1-215ENST00000569252 TBC1D2BQ9UPU7 963 aa20.43■□□□□ 0.86
USB1-215ENST00000569252 PCNTO95613 3336 aa20.42■□□□□ 0.86
USB1-215ENST00000569252 LAMB4A4D0S4 1761 aa20.42■□□□□ 0.86
USB1-215ENST00000569252 IPO8O15397 1037 aaKnown RBP20.42■□□□□ 0.86
USB1-215ENST00000569252 RIC3Q7Z5B4 369 aa20.42■□□□□ 0.86
USB1-215ENST00000569252 BCL2L13Q9BXK5 485 aa20.42■□□□□ 0.86
USB1-215ENST00000569252 ZNF652Q9Y2D9 606 aa20.42■□□□□ 0.86
USB1-215ENST00000569252 COL15A1P39059 1388 aa20.42■□□□□ 0.86
USB1-215ENST00000569252 PRELPP51888 382 aa20.41■□□□□ 0.86
USB1-215ENST00000569252 FKBP5Q13451 457 aaPredicted RBP20.41■□□□□ 0.86
USB1-215ENST00000569252 USPL1Q5W0Q7 1092 aa20.41■□□□□ 0.86
USB1-215ENST00000569252 ANKRD13DQ6ZTN6 518 aa20.41■□□□□ 0.86
USB1-215ENST00000569252 MRPL50Q8N5N7 158 aaKnown RBP20.41■□□□□ 0.86
USB1-215ENST00000569252 PHAXQ9H814 394 aaKnown RBP20.41■□□□□ 0.86
USB1-215ENST00000569252 RRAGCQ9HB90 399 aa20.41■□□□□ 0.86
USB1-215ENST00000569252 PIM2Q9P1W9 311 aa20.41■□□□□ 0.86
USB1-215ENST00000569252 NARFQ9UHQ1 456 aa20.41■□□□□ 0.86
USB1-215ENST00000569252 POLRMTO00411 1230 aaKnown RBP20.4■□□□□ 0.86
USB1-215ENST00000569252 SBF1O95248 1867 aa20.4■□□□□ 0.86
USB1-215ENST00000569252 FLIIQ13045 1269 aa20.4■□□□□ 0.86
USB1-215ENST00000569252 DALRD3Q5D0E6 543 aaKnown RBP20.4■□□□□ 0.86
USB1-215ENST00000569252 AFDNP55196 1824 aaKnown RBP20.39■□□□□ 0.86
USB1-215ENST00000569252 ERVV-1B6SEH8 477 aa20.39■□□□□ 0.85
USB1-215ENST00000569252 CENPBP07199 599 aaPredicted RBP20.39■□□□□ 0.85
USB1-215ENST00000569252 KIF16BQ96L93 1317 aa20.38■□□□□ 0.85
USB1-215ENST00000569252 TTLL7Q6ZT98 887 aa20.38■□□□□ 0.85
USB1-215ENST00000569252 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.38■□□□□ 0.85
USB1-215ENST00000569252 PLBD2Q8NHP8 589 aa20.38■□□□□ 0.85
USB1-215ENST00000569252 FRAT1Q92837 279 aaPredicted RBP20.38■□□□□ 0.85
USB1-215ENST00000569252 CARMIL3Q8ND23 1372 aa20.37■□□□□ 0.85
USB1-215ENST00000569252 PTPRCP08575 1304 aa20.37■□□□□ 0.85
USB1-215ENST00000569252 MAP3K15Q6ZN16 1313 aa20.37■□□□□ 0.85
USB1-215ENST00000569252 BCAR3O75815 825 aa20.37■□□□□ 0.85
USB1-215ENST00000569252 HSP90AB3PQ58FF7 597 aa20.37■□□□□ 0.85
USB1-215ENST00000569252 CLEC4GQ6UXB4 293 aa20.37■□□□□ 0.85
USB1-215ENST00000569252 ZBTB3Q9H5J0 574 aa20.37■□□□□ 0.85
USB1-215ENST00000569252 NOB1Q9ULX3 412 aaKnown RBP20.37■□□□□ 0.85
USB1-215ENST00000569252 TM4SF1P30408 202 aa20.36■□□□□ 0.85
USB1-215ENST00000569252 BRPF1P55201 1214 aaPredicted RBP20.36■□□□□ 0.85
USB1-215ENST00000569252 NEXNQ0ZGT2 675 aa20.36■□□□□ 0.85
USB1-215ENST00000569252 KSR2Q6VAB6 950 aa20.36■□□□□ 0.85
USB1-215ENST00000569252 G2E3Q7L622 706 aa20.36■□□□□ 0.85
USB1-215ENST00000569252 LRP10Q7Z4F1 713 aa20.36■□□□□ 0.85
USB1-215ENST00000569252 C16orf71Q8IYS4 520 aaPredicted RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms