RNA–Protein interactions for RNA: ENST00000569189.2

GGA2-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, human

TSL 5

Gene GGA2, Length 586 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA2-215	ENST00000569189	KRT24	Q2M2I5	525 aa		31.71	■■■□□ 2.67
GGA2-215	ENST00000569189	DALRD3	Q5D0E6	543 aa	Known RBP	31.71	■■■□□ 2.67
GGA2-215	ENST00000569189	KIF6	Q6ZMV9	814 aa		31.71	■■■□□ 2.67
GGA2-215	ENST00000569189	CNBD1	Q8NA66	436 aa		31.71	■■■□□ 2.67
GGA2-215	ENST00000569189	ZNF784	Q8NCA9	323 aa	Predicted RBP	31.71	■■■□□ 2.67
GGA2-215	ENST00000569189	COL11A2	P13942	1736 aa	Predicted RBP	31.71	■■■□□ 2.67
GGA2-215	ENST00000569189	NPHP1	O15259	732 aa		31.7	■■■□□ 2.67
GGA2-215	ENST00000569189	HLF	Q16534	295 aa		31.7	■■■□□ 2.67
GGA2-215	ENST00000569189	TTLL7	Q6ZT98	887 aa		31.7	■■■□□ 2.67
GGA2-215	ENST00000569189	MAP3K15	Q6ZN16	1313 aa		31.7	■■■□□ 2.66
GGA2-215	ENST00000569189	ERVV-1	B6SEH8	477 aa		31.69	■■■□□ 2.66
GGA2-215	ENST00000569189	ZNF853	P0CG23	659 aa		31.69	■■■□□ 2.66
GGA2-215	ENST00000569189	PDIA6	Q15084	440 aa		31.69	■■■□□ 2.66
GGA2-215	ENST00000569189	MBIP	Q9NS73	344 aa		31.69	■■■□□ 2.66
GGA2-215	ENST00000569189	IFT57	Q9NWB7	429 aa		31.69	■■■□□ 2.66
GGA2-215	ENST00000569189	NIP7	Q9Y221	180 aa	Known RBP eCLIP	31.69	■■■□□ 2.66
GGA2-215	ENST00000569189	NBPF5P	Q86XG9	351 aa	Predicted RBP	31.68	■■■□□ 2.66
GGA2-215	ENST00000569189	C2CD5	Q86YS7	1000 aa		31.68	■■■□□ 2.66
GGA2-215	ENST00000569189	CCDC24	Q8N4L8	307 aa		31.68	■■■□□ 2.66
GGA2-215	ENST00000569189	BRIP1	Q9BX63	1249 aa		31.68	■■■□□ 2.66
GGA2-215	ENST00000569189	GNAI1	P63096	354 aa		31.67	■■■□□ 2.66
GGA2-215	ENST00000569189	ST5	P78524	1137 aa		31.67	■■■□□ 2.66
GGA2-215	ENST00000569189	LRP10	Q7Z4F1	713 aa		31.67	■■■□□ 2.66
GGA2-215	ENST00000569189	NECTIN2	Q92692	538 aa		31.67	■■■□□ 2.66
GGA2-215	ENST00000569189		H0YIN7	160 aa		31.66	■■■□□ 2.66
GGA2-215	ENST00000569189	HOXB7	P09629	217 aa		31.66	■■■□□ 2.66
GGA2-215	ENST00000569189	PDE6B	P35913	854 aa		31.66	■■■□□ 2.66
GGA2-215	ENST00000569189	PROSER3	Q2NL68	480 aa		31.66	■■■□□ 2.66
GGA2-215	ENST00000569189	ATP10D	Q9P241	1426 aa		31.66	■■■□□ 2.66
GGA2-215	ENST00000569189	ZBTB3	Q9H5J0	574 aa		31.65	■■■□□ 2.66
GGA2-215	ENST00000569189	PDZRN3	Q9UPQ7	1066 aa		31.65	■■■□□ 2.66
GGA2-215	ENST00000569189	ANXA1	P04083	346 aa		31.64	■■■□□ 2.66
GGA2-215	ENST00000569189	CCDC27	Q2M243	656 aa		31.63	■■■□□ 2.65
GGA2-215	ENST00000569189	ARHGAP27	Q6ZUM4	889 aa		31.63	■■■□□ 2.65
GGA2-215	ENST00000569189	SENP3-EIF4A1	A0A087X0R7	540 aa		31.62	■■■□□ 2.65
GGA2-215	ENST00000569189	CACNA1S	Q13698	1873 aa		31.62	■■■□□ 2.65
GGA2-215	ENST00000569189	HDGFL1	Q5TGJ6	251 aa		31.62	■■■□□ 2.65
GGA2-215	ENST00000569189	ANKRD36C	Q5JPF3	1778 aa		31.61	■■■□□ 2.65
GGA2-215	ENST00000569189	ADCY9	O60503	1353 aa		31.61	■■■□□ 2.65
GGA2-215	ENST00000569189	DUSP27	Q5VZP5	1158 aa		31.61	■■■□□ 2.65
GGA2-215	ENST00000569189	TPTE2	Q6XPS3	522 aa		31.61	■■■□□ 2.65
GGA2-215	ENST00000569189	TTLL6	Q8N841	843 aa		31.61	■■■□□ 2.65
GGA2-215	ENST00000569189	DDX21	Q9NR30	783 aa	Known RBP eCLIP	31.61	■■■□□ 2.65
GGA2-215	ENST00000569189	FAM177B	A6PVY3	158 aa		31.59	■■■□□ 2.65
GGA2-215	ENST00000569189	GIGYF2	Q6Y7W6	1299 aa	Known RBP	31.59	■■■□□ 2.65
GGA2-215	ENST00000569189	CHPF2	Q9P2E5	772 aa		31.59	■■■□□ 2.65
GGA2-215	ENST00000569189	ARFGEF2	Q9Y6D5	1785 aa		31.58	■■■□□ 2.65
GGA2-215	ENST00000569189	NCBP3	Q53F19	620 aa	Known RBP	31.58	■■■□□ 2.65
GGA2-215	ENST00000569189	WWC1	Q8IX03	1113 aa		31.58	■■■□□ 2.65
GGA2-215	ENST00000569189	ZNF622	Q969S3	477 aa	Known RBP eCLIP	31.57	■■■□□ 2.64
GGA2-215	ENST00000569189	SBF1	O95248	1867 aa		31.57	■■■□□ 2.64
GGA2-215	ENST00000569189	GPT	P24298	496 aa		31.56	■■■□□ 2.64
GGA2-215	ENST00000569189	COPS6	Q7L5N1	327 aa		31.56	■■■□□ 2.64
GGA2-215	ENST00000569189	XAGE3	Q8WTP9	111 aa		31.56	■■■□□ 2.64
GGA2-215	ENST00000569189	NYX	Q9GZU5	481 aa		31.56	■■■□□ 2.64
GGA2-215	ENST00000569189	IBTK	Q9P2D0	1353 aa	Predicted RBP	31.56	■■■□□ 2.64
GGA2-215	ENST00000569189	UBN2	Q6ZU65	1347 aa		31.55	■■■□□ 2.64
GGA2-215	ENST00000569189	AIMP1	Q12904	312 aa	Known RBP	31.55	■■■□□ 2.64
GGA2-215	ENST00000569189	FAM9B	Q8IZU0	186 aa		31.55	■■■□□ 2.64
GGA2-215	ENST00000569189	TNRC6C	Q9HCJ0	1690 aa	Known RBP	31.54	■■■□□ 2.64
GGA2-215	ENST00000569189	SRGN	P10124	158 aa		31.54	■■■□□ 2.64
GGA2-215	ENST00000569189	GTF2E1	P29083	439 aa	Predicted RBP	31.54	■■■□□ 2.64
GGA2-215	ENST00000569189	ZNF34	Q8IZ26	560 aa		31.54	■■■□□ 2.64
GGA2-215	ENST00000569189	DBF4	Q9UBU7	674 aa	Predicted RBP	31.54	■■■□□ 2.64
GGA2-215	ENST00000569189	SLX4	Q8IY92	1834 aa		31.53	■■■□□ 2.64
GGA2-215	ENST00000569189	STYK1	Q6J9G0	422 aa		31.52	■■■□□ 2.64
GGA2-215	ENST00000569189	ELL2	O00472	640 aa	Predicted RBP	31.51	■■■□□ 2.63
GGA2-215	ENST00000569189	MASTL	Q96GX5	879 aa		31.51	■■■□□ 2.63
GGA2-215	ENST00000569189	ABCC12	Q96J65	1359 aa		31.51	■■■□□ 2.63
GGA2-215	ENST00000569189	IL16	Q14005	1332 aa		31.5	■■■□□ 2.63
GGA2-215	ENST00000569189	PARP10	Q53GL7	1025 aa		31.5	■■■□□ 2.63
GGA2-215	ENST00000569189	SUSD4	Q5VX71	490 aa		31.5	■■■□□ 2.63
GGA2-215	ENST00000569189	NUTM1	Q86Y26	1132 aa		31.5	■■■□□ 2.63
GGA2-215	ENST00000569189	C8orf58	Q8NAV2	365 aa		31.5	■■■□□ 2.63
GGA2-215	ENST00000569189	CNKSR1	Q969H4	720 aa		31.5	■■■□□ 2.63
GGA2-215	ENST00000569189	KLRG2	A4D1S0	409 aa	Predicted RBP	31.49	■■■□□ 2.63
GGA2-215	ENST00000569189	HSP90AB3P	Q58FF7	597 aa		31.49	■■■□□ 2.63
GGA2-215	ENST00000569189	TSR2	Q969E8	191 aa	Known RBP	31.49	■■■□□ 2.63
GGA2-215	ENST00000569189	HYPK	Q9NX55	129 aa		31.49	■■■□□ 2.63
GGA2-215	ENST00000569189	CCDC88A	Q3V6T2	1871 aa		31.48	■■■□□ 2.63
GGA2-215	ENST00000569189	ERFE	Q4G0M1	354 aa		31.48	■■■□□ 2.63
GGA2-215	ENST00000569189	SALL2	Q9Y467	1007 aa	Predicted RBP	31.48	■■■□□ 2.63
GGA2-215	ENST00000569189	FER1L6	Q2WGJ9	1857 aa		31.48	■■■□□ 2.63
GGA2-215	ENST00000569189	NTSR2	O95665	410 aa		31.47	■■■□□ 2.63
GGA2-215	ENST00000569189	PPP1R42	Q7Z4L9	355 aa		31.47	■■■□□ 2.63
GGA2-215	ENST00000569189	RIC1	Q4ADV7	1423 aa		31.47	■■■□□ 2.63
GGA2-215	ENST00000569189	NPR1	P16066	1061 aa		31.46	■■■□□ 2.63
GGA2-215	ENST00000569189	C9orf131	Q5VYM1	1079 aa		31.46	■■■□□ 2.63
GGA2-215	ENST00000569189	RASSF7	Q02833	373 aa		31.45	■■■□□ 2.63
GGA2-215	ENST00000569189	PRPF40B	Q6NWY9	871 aa	Known RBP	31.45	■■■□□ 2.63
GGA2-215	ENST00000569189	PLBD2	Q8NHP8	589 aa		31.45	■■■□□ 2.63
GGA2-215	ENST00000569189	C21orf2	O43822	256 aa		31.44	■■■□□ 2.62
GGA2-215	ENST00000569189	TSPYL6	Q8N831	410 aa		31.44	■■■□□ 2.62
GGA2-215	ENST00000569189	CHMP4A	Q9BY43	222 aa		31.44	■■■□□ 2.62
GGA2-215	ENST00000569189	ZNF219	Q9P2Y4	722 aa	Predicted RBP	31.44	■■■□□ 2.62
GGA2-215	ENST00000569189	TCIRG1	Q13488	830 aa		31.43	■■■□□ 2.62
GGA2-215	ENST00000569189	ANKRD13D	Q6ZTN6	518 aa		31.43	■■■□□ 2.62
GGA2-215	ENST00000569189	WDR63	Q8IWG1	891 aa		31.43	■■■□□ 2.62
GGA2-215	ENST00000569189	ZNF526	Q8TF50	670 aa	Predicted RBP	31.43	■■■□□ 2.62
GGA2-215	ENST00000569189	GPBP1L1	Q9HC44	474 aa	Predicted RBP	31.43	■■■□□ 2.62

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