RNA–Protein interactions for RNA: ENST00000569045.1

CDR2-207, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 826 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-207ENST00000569045 CNKSR1Q969H4 720 aa21.85■■□□□ 1.09
CDR2-207ENST00000569045 NIP7Q9Y221 180 aaKnown RBP eCLIP21.85■■□□□ 1.09
CDR2-207ENST00000569045 LAMB4A4D0S4 1761 aa21.84■■□□□ 1.09
CDR2-207ENST00000569045 KDM3BQ7LBC6 1761 aa21.84■■□□□ 1.09
CDR2-207ENST00000569045 ZC3H4Q9UPT8 1303 aaKnown RBP21.84■■□□□ 1.09
CDR2-207ENST00000569045 TOMM70O94826 608 aa21.84■■□□□ 1.09
CDR2-207ENST00000569045 TSPYL4Q9UJ04 414 aa21.84■■□□□ 1.09
CDR2-207ENST00000569045 HSPA6P17066 643 aa21.83■■□□□ 1.09
CDR2-207ENST00000569045 RASSF7Q02833 373 aa21.83■■□□□ 1.09
CDR2-207ENST00000569045 STYK1Q6J9G0 422 aa21.83■■□□□ 1.09
CDR2-207ENST00000569045 KIF6Q6ZMV9 814 aa21.83■■□□□ 1.09
CDR2-207ENST00000569045 NGEFQ8N5V2 710 aa21.83■■□□□ 1.09
CDR2-207ENST00000569045 NMRK2Q9NPI5 230 aa21.83■■□□□ 1.09
CDR2-207ENST00000569045 RRP7AQ9Y3A4 280 aaKnown RBP21.83■■□□□ 1.09
CDR2-207ENST00000569045 ANKRD31Q8N7Z5 1873 aa21.83■■□□□ 1.08
CDR2-207ENST00000569045 GTF2E1P29083 439 aaPredicted RBP21.82■■□□□ 1.08
CDR2-207ENST00000569045 MASTLQ96GX5 879 aa21.82■■□□□ 1.08
CDR2-207ENST00000569045 BABAM1Q9NWV8 329 aa21.82■■□□□ 1.08
CDR2-207ENST00000569045 C21orf2O43822 256 aa21.81■■□□□ 1.08
CDR2-207ENST00000569045 TMPOP42166 694 aaKnown RBP21.81■■□□□ 1.08
CDR2-207ENST00000569045 SOGA3Q5TF21 947 aa21.81■■□□□ 1.08
CDR2-207ENST00000569045 ZNF219Q9P2Y4 722 aaPredicted RBP21.81■■□□□ 1.08
CDR2-207ENST00000569045 SBF1O95248 1867 aa21.81■■□□□ 1.08
CDR2-207ENST00000569045 CEP350Q5VT06 3117 aa21.8■■□□□ 1.08
CDR2-207ENST00000569045 ERVV-1B6SEH8 477 aa21.8■■□□□ 1.08
CDR2-207ENST00000569045 SRGNP10124 158 aa21.8■■□□□ 1.08
CDR2-207ENST00000569045 ERBB4Q15303 1308 aa21.8■■□□□ 1.08
CDR2-207ENST00000569045 MYL6BP14649 208 aa21.79■■□□□ 1.08
CDR2-207ENST00000569045 NYXQ9GZU5 481 aa21.79■■□□□ 1.08
CDR2-207ENST00000569045 FAM177BA6PVY3 158 aa21.78■■□□□ 1.08
CDR2-207ENST00000569045 NPR1P16066 1061 aa21.78■■□□□ 1.08
CDR2-207ENST00000569045 HLFQ16534 295 aa21.78■■□□□ 1.08
CDR2-207ENST00000569045 RUNDC1Q96C34 613 aa21.78■■□□□ 1.08
CDR2-207ENST00000569045 MAP3K15Q6ZN16 1313 aa21.78■■□□□ 1.08
CDR2-207ENST00000569045 COL11A2P13942 1736 aaPredicted RBP21.77■■□□□ 1.08
CDR2-207ENST00000569045 NFKBIEO00221 500 aa21.77■■□□□ 1.08
CDR2-207ENST00000569045 NEUROD2Q15784 382 aa21.77■■□□□ 1.08
CDR2-207ENST00000569045 PRPF40BQ6NWY9 871 aaKnown RBP21.77■■□□□ 1.08
CDR2-207ENST00000569045 CCDC146Q8IYE0 955 aa21.77■■□□□ 1.08
CDR2-207ENST00000569045 RBM46Q8TBY0 533 aaKnown RBP21.77■■□□□ 1.08
CDR2-207ENST00000569045 TAOK3Q9H2K8 898 aa21.76■■□□□ 1.07
CDR2-207ENST00000569045 RRAGCQ9HB90 399 aa21.76■■□□□ 1.07
CDR2-207ENST00000569045 EIF2S2P20042 333 aaKnown RBP21.75■■□□□ 1.07
CDR2-207ENST00000569045 DPY19L2Q6NUT2 758 aa21.75■■□□□ 1.07
CDR2-207ENST00000569045 GLTPD2A6NH11 291 aa21.74■■□□□ 1.07
CDR2-207ENST00000569045 APLP1P51693 650 aa21.74■■□□□ 1.07
CDR2-207ENST00000569045 ZBTB3Q9H5J0 574 aa21.74■■□□□ 1.07
CDR2-207ENST00000569045 TNRC6CQ9HCJ0 1690 aaKnown RBP21.74■■□□□ 1.07
CDR2-207ENST00000569045 LTBP3Q9NS15 1303 aa21.74■■□□□ 1.07
CDR2-207ENST00000569045 ALDH1B1P30837 517 aa21.73■■□□□ 1.07
CDR2-207ENST00000569045 ERFEQ4G0M1 354 aa21.73■■□□□ 1.07
CDR2-207ENST00000569045 TTLL7Q6ZT98 887 aa21.73■■□□□ 1.07
CDR2-207ENST00000569045 PRKRIP1Q9H875 184 aaPredicted RBP21.73■■□□□ 1.07
CDR2-207ENST00000569045 KLRG2A4D1S0 409 aaPredicted RBP21.72■■□□□ 1.07
CDR2-207ENST00000569045 VEGFAP15692 232 aaPredicted RBP21.72■■□□□ 1.07
CDR2-207ENST00000569045 FSTL1Q12841 308 aa21.72■■□□□ 1.07
CDR2-207ENST00000569045 CCDC93Q567U6 631 aa21.72■■□□□ 1.07
CDR2-207ENST00000569045 ADAMTS8Q9UP79 889 aa21.72■■□□□ 1.07
CDR2-207ENST00000569045 LAS1LQ9Y4W2 734 aaKnown RBP21.72■■□□□ 1.07
CDR2-207ENST00000569045 CCDC88AQ3V6T2 1871 aa21.72■■□□□ 1.07
CDR2-207ENST00000569045 PRELPP51888 382 aa21.71■■□□□ 1.07
CDR2-207ENST00000569045 TIAM2Q8IVF5 1701 aa21.71■■□□□ 1.07
CDR2-207ENST00000569045 NUP98P52948 1817 aa21.71■■□□□ 1.07
CDR2-207ENST00000569045 SLX4Q8IY92 1834 aa21.71■■□□□ 1.07
CDR2-207ENST00000569045 CACNA1SQ13698 1873 aa21.71■■□□□ 1.07
CDR2-207ENST00000569045 FER1L6Q2WGJ9 1857 aa21.71■■□□□ 1.07
CDR2-207ENST00000569045 ARFGEF2Q9Y6D5 1785 aa21.7■■□□□ 1.06
CDR2-207ENST00000569045 GPTP24298 496 aa21.7■■□□□ 1.06
CDR2-207ENST00000569045 PARP10Q53GL7 1025 aa21.69■■□□□ 1.06
CDR2-207ENST00000569045 GIGYF2Q6Y7W6 1299 aaKnown RBP21.69■■□□□ 1.06
CDR2-207ENST00000569045 PPP1R42Q7Z4L9 355 aa21.69■■□□□ 1.06
CDR2-207ENST00000569045 RPGRQ92834 1020 aaKnown RBP21.69■■□□□ 1.06
CDR2-207ENST00000569045 IBTKQ9P2D0 1353 aaPredicted RBP21.69■■□□□ 1.06
CDR2-207ENST00000569045 CHL1O00533 1208 aa21.68■■□□□ 1.06
CDR2-207ENST00000569045 ZEB1P37275 1124 aaPredicted RBP21.68■■□□□ 1.06
CDR2-207ENST00000569045 NUTM1Q86Y26 1132 aa21.68■■□□□ 1.06
CDR2-207ENST00000569045 RTKN2Q8IZC4 609 aa21.68■■□□□ 1.06
CDR2-207ENST00000569045 SMC1BQ8NDV3 1235 aa21.68■■□□□ 1.06
CDR2-207ENST00000569045 ZNF34Q8IZ26 560 aa21.67■■□□□ 1.06
CDR2-207ENST00000569045 TRIM35Q9UPQ4 493 aa21.67■■□□□ 1.06
CDR2-207ENST00000569045 HSP90AB3PQ58FF7 597 aa21.66■■□□□ 1.06
CDR2-207ENST00000569045 C7orf43Q8WVR3 580 aa21.66■■□□□ 1.06
CDR2-207ENST00000569045 NECTIN2Q92692 538 aa21.66■■□□□ 1.06
CDR2-207ENST00000569045 DICER1Q9UPY3 1922 aaKnown RBP21.66■■□□□ 1.06
CDR2-207ENST00000569045 UBN2Q6ZU65 1347 aa21.65■■□□□ 1.06
CDR2-207ENST00000569045 FKBP4Q02790 459 aaKnown RBP eCLIP21.65■■□□□ 1.06
CDR2-207ENST00000569045 CALD1Q05682 793 aaKnown RBP21.65■■□□□ 1.06
CDR2-207ENST00000569045 PDIA6Q15084 440 aa21.65■■□□□ 1.06
CDR2-207ENST00000569045 SUSD4Q5VX71 490 aa21.65■■□□□ 1.06
CDR2-207ENST00000569045 AIMP1Q12904 312 aaKnown RBP21.64■■□□□ 1.05
CDR2-207ENST00000569045 CRY2Q49AN0 593 aa21.64■■□□□ 1.05
CDR2-207ENST00000569045 CC2D2BQ6DHV5 1058 aa21.64■■□□□ 1.05
CDR2-207ENST00000569045 DDX21Q9NR30 783 aaKnown RBP eCLIP21.64■■□□□ 1.05
CDR2-207ENST00000569045 RIC1Q4ADV7 1423 aa21.63■■□□□ 1.05
CDR2-207ENST00000569045 ABCC12Q96J65 1359 aa21.63■■□□□ 1.05
CDR2-207ENST00000569045 ANXA1P04083 346 aa21.63■■□□□ 1.05
CDR2-207ENST00000569045 HOXB7P09629 217 aa21.63■■□□□ 1.05
CDR2-207ENST00000569045 PROSER3Q2NL68 480 aa21.63■■□□□ 1.05
CDR2-207ENST00000569045 COPS6Q7L5N1 327 aa21.63■■□□□ 1.05
CDR2-207ENST00000569045 RBM17Q96I25 401 aaKnown RBP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms