RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 SPC24Q8NBT2 197 aa20.62■□□□□ 0.89
VAC14-210ENST00000568548 SIL1Q9H173 461 aa20.62■□□□□ 0.89
VAC14-210ENST00000568548 CCDC39Q9UFE4 941 aa20.62■□□□□ 0.89
VAC14-210ENST00000568548 CWF19L2Q2TBE0 894 aaKnown RBP20.62■□□□□ 0.89
VAC14-210ENST00000568548 USP54Q70EL1 1684 aa20.61■□□□□ 0.89
VAC14-210ENST00000568548 JAKMIP1Q96N16 626 aaKnown RBP20.61■□□□□ 0.89
VAC14-210ENST00000568548 MCM2P49736 904 aa20.61■□□□□ 0.89
VAC14-210ENST00000568548 SMC3Q9UQE7 1217 aa20.61■□□□□ 0.89
VAC14-210ENST00000568548 PPFIA3O75145 1194 aa20.6■□□□□ 0.89
VAC14-210ENST00000568548 CAMK4Q16566 473 aa20.6■□□□□ 0.89
VAC14-210ENST00000568548 KLHDC4Q8TBB5 520 aa20.6■□□□□ 0.89
VAC14-210ENST00000568548 SGSM2O43147 1006 aa20.6■□□□□ 0.89
VAC14-210ENST00000568548 PROSER3Q2NL68 480 aa20.6■□□□□ 0.89
VAC14-210ENST00000568548 STAP2Q9UGK3 403 aa20.6■□□□□ 0.89
VAC14-210ENST00000568548 WDR33Q9C0J8 1336 aaKnown RBP20.6■□□□□ 0.89
VAC14-210ENST00000568548 TCHHQ07283 1943 aa20.6■□□□□ 0.89
VAC14-210ENST00000568548 ADCY5O95622 1261 aa20.6■□□□□ 0.89
VAC14-210ENST00000568548 KCNJ4P48050 445 aa20.6■□□□□ 0.89
VAC14-210ENST00000568548 SSH3Q8TE77 659 aa20.6■□□□□ 0.89
VAC14-210ENST00000568548 STX6O43752 255 aa20.59■□□□□ 0.89
VAC14-210ENST00000568548 NDUFB9Q9Y6M9 179 aa20.59■□□□□ 0.89
VAC14-210ENST00000568548 ZNF500O60304 480 aaPredicted RBP20.59■□□□□ 0.89
VAC14-210ENST00000568548 CCDC8Q9H0W5 538 aaPredicted RBP20.59■□□□□ 0.89
VAC14-210ENST00000568548 DIAPH3Q9NSV4 1193 aa20.59■□□□□ 0.89
VAC14-210ENST00000568548 STK3Q13188 491 aa20.58■□□□□ 0.89
VAC14-210ENST00000568548 LSG1Q9H089 658 aaKnown RBP20.58■□□□□ 0.89
VAC14-210ENST00000568548 NBPF6Q5VWK0 638 aa20.58■□□□□ 0.88
VAC14-210ENST00000568548 NBPF4Q96M43 638 aa20.58■□□□□ 0.88
VAC14-210ENST00000568548 TAF6LQ9Y6J9 622 aa20.58■□□□□ 0.88
VAC14-210ENST00000568548 RPAP1Q9BWH6 1393 aaPredicted RBP20.58■□□□□ 0.88
VAC14-210ENST00000568548 LTN1O94822 1766 aa20.58■□□□□ 0.88
VAC14-210ENST00000568548 GJB2P29033 226 aa20.57■□□□□ 0.88
VAC14-210ENST00000568548 IP6K1Q92551 441 aa20.57■□□□□ 0.88
VAC14-210ENST00000568548 INTS4Q96HW7 963 aaKnown RBP20.57■□□□□ 0.88
VAC14-210ENST00000568548 FAM227BQ96M60 508 aa20.57■□□□□ 0.88
VAC14-210ENST00000568548 NWD1Q149M9 1564 aa20.57■□□□□ 0.88
VAC14-210ENST00000568548 CHGBP05060 677 aa20.57■□□□□ 0.88
VAC14-210ENST00000568548 ZSCAN22P10073 491 aaPredicted RBP20.57■□□□□ 0.88
VAC14-210ENST00000568548 PIP4K2AP48426 406 aaPredicted RBP20.57■□□□□ 0.88
VAC14-210ENST00000568548 ANAPC15P60006 121 aa20.57■□□□□ 0.88
VAC14-210ENST00000568548 SYAP1Q96A49 352 aaPredicted RBP20.57■□□□□ 0.88
VAC14-210ENST00000568548 C9orf78Q9NZ63 289 aaPredicted RBP20.57■□□□□ 0.88
VAC14-210ENST00000568548 EDC3Q96F86 508 aaKnown RBP20.57■□□□□ 0.88
VAC14-210ENST00000568548 CNTROBQ8N137 903 aa20.56■□□□□ 0.88
VAC14-210ENST00000568548 KCNH5Q8NCM2 988 aa20.56■□□□□ 0.88
VAC14-210ENST00000568548 DNAAF4Q8WXU2 420 aa20.56■□□□□ 0.88
VAC14-210ENST00000568548 LIMCH1Q9UPQ0 1083 aa20.56■□□□□ 0.88
VAC14-210ENST00000568548 RAD50Q92878 1312 aa20.55■□□□□ 0.88
VAC14-210ENST00000568548 FOSBP53539 338 aa20.55■□□□□ 0.88
VAC14-210ENST00000568548 KIAA2012Q0VF49 1180 aa20.55■□□□□ 0.88
VAC14-210ENST00000568548 KIF1BPQ96EK5 621 aa20.55■□□□□ 0.88
VAC14-210ENST00000568548 TFIP11Q9UBB9 837 aaKnown RBP20.55■□□□□ 0.88
VAC14-210ENST00000568548 C19orf44Q9H6X5 657 aa20.55■□□□□ 0.88
VAC14-210ENST00000568548 NFAT5O94916 1531 aa20.55■□□□□ 0.88
VAC14-210ENST00000568548 AP5Z1O43299 807 aa20.54■□□□□ 0.88
VAC14-210ENST00000568548 AACSQ86V21 672 aa20.54■□□□□ 0.88
VAC14-210ENST00000568548 BOLA2Q9H3K6 86 aa20.54■□□□□ 0.88
VAC14-210ENST00000568548 PDRG1Q9NUG6 133 aa20.54■□□□□ 0.88
VAC14-210ENST00000568548 TLR7Q9NYK1 1049 aaKnown RBP20.54■□□□□ 0.88
VAC14-210ENST00000568548 MAP3K2Q9Y2U5 619 aa20.54■□□□□ 0.88
VAC14-210ENST00000568548 TEFQ10587 303 aa20.53■□□□□ 0.88
VAC14-210ENST00000568548 HS1BP3Q53T59 392 aa20.53■□□□□ 0.88
VAC14-210ENST00000568548 BEND3Q5T5X7 828 aa20.53■□□□□ 0.88
VAC14-210ENST00000568548 TTC14Q96N46 770 aa20.53■□□□□ 0.88
VAC14-210ENST00000568548 BTBD11A6QL63 1104 aa20.53■□□□□ 0.88
VAC14-210ENST00000568548 F13A1P00488 732 aa20.53■□□□□ 0.88
VAC14-210ENST00000568548 CKAP2LQ8IYA6 745 aa20.53■□□□□ 0.88
VAC14-210ENST00000568548 MAP3K5Q99683 1374 aa20.53■□□□□ 0.88
VAC14-210ENST00000568548 GCP02774 474 aa20.52■□□□□ 0.88
VAC14-210ENST00000568548 IFIT2P09913 472 aaKnown RBP20.52■□□□□ 0.88
VAC14-210ENST00000568548 ME3Q16798 604 aa20.52■□□□□ 0.88
VAC14-210ENST00000568548 KRT28Q7Z3Y7 464 aa20.52■□□□□ 0.88
VAC14-210ENST00000568548 EIF4A1P60842 406 aaKnown RBP20.52■□□□□ 0.88
VAC14-210ENST00000568548 HYPKQ9NX55 129 aa20.52■□□□□ 0.88
VAC14-210ENST00000568548 HTATSF1O43719 755 aaKnown RBP20.51■□□□□ 0.87
VAC14-210ENST00000568548 CCDC183Q5T5S1 534 aa20.51■□□□□ 0.87
VAC14-210ENST00000568548 CSPP1Q1MSJ5 1256 aa20.51■□□□□ 0.87
VAC14-210ENST00000568548 CLASRPQ8N2M8 674 aaKnown RBP20.51■□□□□ 0.87
VAC14-210ENST00000568548 C1orf167Q5SNV9 1468 aa20.51■□□□□ 0.87
VAC14-210ENST00000568548 ZNF530Q6P9A1 599 aaPredicted RBP20.5■□□□□ 0.87
VAC14-210ENST00000568548 HSPA2P54652 639 aa20.5■□□□□ 0.87
VAC14-210ENST00000568548 SASS6Q6UVJ0 657 aa20.5■□□□□ 0.87
VAC14-210ENST00000568548 TAOK2Q9UL54 1235 aa20.5■□□□□ 0.87
VAC14-210ENST00000568548 ST3GAL1Q11201 340 aa20.5■□□□□ 0.87
VAC14-210ENST00000568548 POLA2Q14181 598 aa20.5■□□□□ 0.87
VAC14-210ENST00000568548 DDX11Q96FC9 970 aa20.5■□□□□ 0.87
VAC14-210ENST00000568548 CEBPZQ03701 1054 aaKnown RBP20.49■□□□□ 0.87
VAC14-210ENST00000568548 TPCN1Q9ULQ1 816 aa20.49■□□□□ 0.87
VAC14-210ENST00000568548 PHF14O94880 888 aa20.49■□□□□ 0.87
VAC14-210ENST00000568548 ATF3P18847 181 aa20.49■□□□□ 0.87
VAC14-210ENST00000568548 MTMR6Q9Y217 621 aa20.49■□□□□ 0.87
VAC14-210ENST00000568548 MYL6BP14649 208 aa20.48■□□□□ 0.87
VAC14-210ENST00000568548 NOLC1Q14978 699 aaKnown RBP eCLIP20.48■□□□□ 0.87
VAC14-210ENST00000568548 CDC37L1Q7L3B6 337 aa20.48■□□□□ 0.87
VAC14-210ENST00000568548 TMEM94Q12767 1356 aa20.48■□□□□ 0.87
VAC14-210ENST00000568548 RAB11FIP3O75154 756 aa20.48■□□□□ 0.87
VAC14-210ENST00000568548 SLC39A6Q13433 755 aa20.48■□□□□ 0.87
VAC14-210ENST00000568548 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.48■□□□□ 0.87
VAC14-210ENST00000568548 LARP1BQ659C4 914 aaKnown RBP20.47■□□□□ 0.87
VAC14-210ENST00000568548 ARHGEF25Q86VW2 580 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms