RNA–Protein interactions for RNA: ENST00000568515.1

DENND4A-208, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 2,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-208ENST00000568515 VPS53Q5VIR6 699 aa25.8■■□□□ 1.72
DENND4A-208ENST00000568515 PDRG1Q9NUG6 133 aa25.8■■□□□ 1.72
DENND4A-208ENST00000568515 GTF2F1P35269 517 aaKnown RBP eCLIP25.8■■□□□ 1.722e-10■■■■■ 28.8
DENND4A-208ENST00000568515 RUFY2Q8WXA3 655 aa25.8■■□□□ 1.72
DENND4A-208ENST00000568515 EIF2S2P20042 333 aaKnown RBP25.79■■□□□ 1.72
DENND4A-208ENST00000568515 BEND3Q5T5X7 828 aa25.79■■□□□ 1.72
DENND4A-208ENST00000568515 ZSCAN31Q96LW9 406 aaPredicted RBP25.79■■□□□ 1.72
DENND4A-208ENST00000568515 NWD1Q149M9 1564 aa25.79■■□□□ 1.72
DENND4A-208ENST00000568515 PLCB2Q00722 1185 aa25.79■■□□□ 1.72
DENND4A-208ENST00000568515 PTH1RQ03431 593 aa25.79■■□□□ 1.72
DENND4A-208ENST00000568515 JAKMIP1Q96N16 626 aaKnown RBP25.79■■□□□ 1.72
DENND4A-208ENST00000568515 SLC26A8Q96RN1 970 aa25.79■■□□□ 1.72
DENND4A-208ENST00000568515 SH2B1Q9NRF2 756 aaPredicted RBP25.79■■□□□ 1.72
DENND4A-208ENST00000568515 CRYBG1Q9Y4K1 1723 aa25.78■■□□□ 1.72
DENND4A-208ENST00000568515 PIK3C2AO00443 1686 aa25.78■■□□□ 1.72
DENND4A-208ENST00000568515 JARID2Q92833 1246 aaPredicted RBP25.78■■□□□ 1.72
DENND4A-208ENST00000568515 ADCK5Q3MIX3 580 aa25.78■■□□□ 1.72
DENND4A-208ENST00000568515 DNAAF4Q8WXU2 420 aa25.78■■□□□ 1.72
DENND4A-208ENST00000568515 TM6SF1Q9BZW5 370 aa25.78■■□□□ 1.72
DENND4A-208ENST00000568515 ZSWIM6Q9HCJ5 1215 aa25.77■■□□□ 1.72
DENND4A-208ENST00000568515 AP5Z1O43299 807 aa25.77■■□□□ 1.72
DENND4A-208ENST00000568515 PRPF40BQ6NWY9 871 aaKnown RBP25.77■■□□□ 1.72
DENND4A-208ENST00000568515 CYP46A1Q9Y6A2 500 aa25.77■■□□□ 1.72
DENND4A-208ENST00000568515 OS9Q13438 667 aaPredicted RBP25.76■■□□□ 1.71
DENND4A-208ENST00000568515 KCNB2Q92953 911 aa25.76■■□□□ 1.71
DENND4A-208ENST00000568515 LTV1Q96GA3 475 aaPredicted RBP25.76■■□□□ 1.71
DENND4A-208ENST00000568515 CCDC94Q9BW85 323 aaPredicted RBP25.76■■□□□ 1.71
DENND4A-208ENST00000568515 PI4KAP2A4QPH2 592 aa25.76■■□□□ 1.71
DENND4A-208ENST00000568515 DTNBO60941 627 aa25.76■■□□□ 1.71
DENND4A-208ENST00000568515 PI4KAP1Q8N8J0 262 aa25.76■■□□□ 1.71
DENND4A-208ENST00000568515 TSC1Q92574 1164 aa25.76■■□□□ 1.71
DENND4A-208ENST00000568515 AMOTL2Q9Y2J4 779 aa25.75■■□□□ 1.71
DENND4A-208ENST00000568515 SMAP1Q8IYB5 467 aaPredicted RBP25.75■■□□□ 1.71
DENND4A-208ENST00000568515 CLASRPQ8N2M8 674 aaKnown RBP25.74■■□□□ 1.71
DENND4A-208ENST00000568515 CHPF2Q9P2E5 772 aa25.74■■□□□ 1.71
DENND4A-208ENST00000568515 ST3GAL1Q11201 340 aa25.74■■□□□ 1.71
DENND4A-208ENST00000568515 ZNF710Q8N1W2 664 aa25.74■■□□□ 1.71
DENND4A-208ENST00000568515 RGPD8O14715 1765 aaPredicted RBP25.74■■□□□ 1.71
DENND4A-208ENST00000568515 VPS37CA5D8V6 355 aaPredicted RBP25.73■■□□□ 1.71
DENND4A-208ENST00000568515 EIF4A1P60842 406 aaKnown RBP25.73■■□□□ 1.71
DENND4A-208ENST00000568515 KIAA1524Q8TCG1 905 aa25.73■■□□□ 1.71
DENND4A-208ENST00000568515 PRDM4Q9UKN5 801 aa25.73■■□□□ 1.71
DENND4A-208ENST00000568515 TPM3P06753 285 aa25.73■■□□□ 1.71
DENND4A-208ENST00000568515 ME3Q16798 604 aa25.73■■□□□ 1.71
DENND4A-208ENST00000568515 NUTM2GQ5VZR2 741 aa25.73■■□□□ 1.71
DENND4A-208ENST00000568515 ECHDC1Q9NTX5 307 aa25.73■■□□□ 1.71
DENND4A-208ENST00000568515 CCDC192P0DO97 292 aa25.72■■□□□ 1.71
DENND4A-208ENST00000568515 KIF3AQ9Y496 699 aa25.72■■□□□ 1.71
DENND4A-208ENST00000568515 NECTIN1Q15223 517 aa25.71■■□□□ 1.71
DENND4A-208ENST00000568515 KCNF1Q9H3M0 494 aa25.71■■□□□ 1.71
DENND4A-208ENST00000568515 HOXB7P09629 217 aa25.71■■□□□ 1.71
DENND4A-208ENST00000568515 CEMIPQ8WUJ3 1361 aa25.71■■□□□ 1.71
DENND4A-208ENST00000568515 MTX1Q13505 466 aa25.71■■□□□ 1.71
DENND4A-208ENST00000568515 USHBP1Q8N6Y0 703 aa25.71■■□□□ 1.71
DENND4A-208ENST00000568515 NECAB1Q8N987 351 aa25.71■■□□□ 1.71
DENND4A-208ENST00000568515 PYCARDQ9ULZ3 195 aa25.7■■□□□ 1.7
DENND4A-208ENST00000568515 ZKSCAN1P17029 563 aaPredicted RBP25.7■■□□□ 1.7
DENND4A-208ENST00000568515 GPATCH3Q96I76 525 aa25.7■■□□□ 1.7
DENND4A-208ENST00000568515 CHMP4AQ9BY43 222 aa25.7■■□□□ 1.7
DENND4A-208ENST00000568515 DDX54Q8TDD1 881 aaKnown RBP25.69■■□□□ 1.7
DENND4A-208ENST00000568515 DIP2AQ14689 1571 aa25.69■■□□□ 1.7
DENND4A-208ENST00000568515 CCDC171Q6TFL3 1326 aa25.69■■□□□ 1.7
DENND4A-208ENST00000568515 EVI5LQ96CN4 794 aa25.69■■□□□ 1.7
DENND4A-208ENST00000568515 GOLGA6L6A8MZA4 724 aa25.68■■□□□ 1.7
DENND4A-208ENST00000568515 IFIT2P09913 472 aaKnown RBP25.68■■□□□ 1.7
DENND4A-208ENST00000568515 LARP1BQ659C4 914 aaKnown RBP25.68■■□□□ 1.7
DENND4A-208ENST00000568515 SPC24Q8NBT2 197 aa25.68■■□□□ 1.7
DENND4A-208ENST00000568515 ADCY9O60503 1353 aa25.68■■□□□ 1.7
DENND4A-208ENST00000568515 ANXA1P04083 346 aa25.68■■□□□ 1.7
DENND4A-208ENST00000568515 TTC6Q86TZ1 520 aa25.68■■□□□ 1.7
DENND4A-208ENST00000568515 LGR6Q9HBX8 967 aa25.68■■□□□ 1.7
DENND4A-208ENST00000568515 TPCN1Q9ULQ1 816 aa25.68■■□□□ 1.7
DENND4A-208ENST00000568515 RBM8AQ9Y5S9 174 aaKnown RBP25.68■■□□□ 1.7
DENND4A-208ENST00000568515 KRT85P78386 507 aa25.67■■□□□ 1.7
DENND4A-208ENST00000568515 CREB3L3Q68CJ9 461 aa25.67■■□□□ 1.7
DENND4A-208ENST00000568515 PDIA4P13667 645 aaKnown RBP25.67■■□□□ 1.7
DENND4A-208ENST00000568515 FAM200AQ8TCP9 573 aa25.66■■□□□ 1.7
DENND4A-208ENST00000568515 KCNQ3O43525 872 aa25.66■■□□□ 1.7
DENND4A-208ENST00000568515 MAP3K11Q16584 847 aa25.66■■□□□ 1.7
DENND4A-208ENST00000568515 ERC1Q8IUD2 1116 aa25.66■■□□□ 1.7
DENND4A-208ENST00000568515 EID1Q9Y6B2 187 aa25.65■■□□□ 1.7
DENND4A-208ENST00000568515 FAM177BA6PVY3 158 aa25.65■■□□□ 1.7
DENND4A-208ENST00000568515 KCNJ4P48050 445 aa25.65■■□□□ 1.7
DENND4A-208ENST00000568515 ABTB2Q8N961 1025 aa25.65■■□□□ 1.7
DENND4A-208ENST00000568515 MAP4K1Q92918 833 aa25.65■■□□□ 1.7
DENND4A-208ENST00000568515 NUP62CLQ9H1M0 184 aa25.65■■□□□ 1.7
DENND4A-208ENST00000568515 PA2G4Q9UQ80 394 aaKnown RBP25.65■■□□□ 1.7
DENND4A-208ENST00000568515 ELP1O95163 1332 aa25.65■■□□□ 1.7
DENND4A-208ENST00000568515 MARF1Q9Y4F3 1742 aaKnown RBP25.64■■□□□ 1.7
DENND4A-208ENST00000568515 CDC37L1Q7L3B6 337 aa25.64■■□□□ 1.7
DENND4A-208ENST00000568515 BCL2L12Q9HB09 334 aa25.64■■□□□ 1.7
DENND4A-208ENST00000568515 LIG1P18858 919 aa25.64■■□□□ 1.69
DENND4A-208ENST00000568515 CHMP3Q9Y3E7 222 aa25.64■■□□□ 1.69
DENND4A-208ENST00000568515 FERMT3Q86UX7 667 aa25.63■■□□□ 1.69
DENND4A-208ENST00000568515 AACSQ86V21 672 aa25.63■■□□□ 1.69
DENND4A-208ENST00000568515 C9orf78Q9NZ63 289 aaPredicted RBP25.63■■□□□ 1.69
DENND4A-208ENST00000568515 MRVI1Q9Y6F6 885 aa25.63■■□□□ 1.69
DENND4A-208ENST00000568515 PDCP20941 246 aa25.63■■□□□ 1.69
DENND4A-208ENST00000568515 PSMA5P28066 241 aa25.63■■□□□ 1.69
DENND4A-208ENST00000568515 TYRO3Q06418 890 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms