RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 CLEC17AQ6ZS10 378 aa10.74□□□□□ -0.69
HDGFL3-206ENST00000568294 LIMCH1Q9UPQ0 1083 aa10.74□□□□□ -0.69
HDGFL3-206ENST00000568294 CLTCQ00610 1675 aaKnown RBP10.74□□□□□ -0.69
HDGFL3-206ENST00000568294 PI4K2BQ8TCG2 481 aa10.74□□□□□ -0.69
HDGFL3-206ENST00000568294 DLG5Q8TDM6 1919 aa10.73□□□□□ -0.69
HDGFL3-206ENST00000568294 ZC3H6P61129 1189 aaKnown RBP10.73□□□□□ -0.69
HDGFL3-206ENST00000568294 LARP1BQ659C4 914 aaKnown RBP10.73□□□□□ -0.69
HDGFL3-206ENST00000568294 MAP3K5Q99683 1374 aa10.73□□□□□ -0.69
HDGFL3-206ENST00000568294 PLEKHG3A1L390 1219 aa10.73□□□□□ -0.69
HDGFL3-206ENST00000568294 F13A1P00488 732 aa10.73□□□□□ -0.69
HDGFL3-206ENST00000568294 CUL4AQ13619 759 aa10.73□□□□□ -0.69
HDGFL3-206ENST00000568294 SLFNL1Q499Z3 407 aa10.73□□□□□ -0.69
HDGFL3-206ENST00000568294 C1orf141Q5JVX7 400 aa10.73□□□□□ -0.69
HDGFL3-206ENST00000568294 CYP46A1Q9Y6A2 500 aa10.73□□□□□ -0.69
HDGFL3-206ENST00000568294 RAD50Q92878 1312 aa10.73□□□□□ -0.69
HDGFL3-206ENST00000568294 KIF24Q5T7B8 1368 aa10.73□□□□□ -0.69
HDGFL3-206ENST00000568294 TMEM2Q9UHN6 1383 aa10.73□□□□□ -0.69
HDGFL3-206ENST00000568294 DLC1Q96QB1 1528 aa10.73□□□□□ -0.69
HDGFL3-206ENST00000568294 G3BP1Q13283 466 aaKnown RBP eCLIP10.73□□□□□ -0.69
HDGFL3-206ENST00000568294 CCDC183Q5T5S1 534 aa10.73□□□□□ -0.69
HDGFL3-206ENST00000568294 CCDC129Q6ZRS4 1044 aa10.73□□□□□ -0.69
HDGFL3-206ENST00000568294 BICD2Q8TD16 824 aa10.73□□□□□ -0.69
HDGFL3-206ENST00000568294 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.73□□□□□ -0.69
HDGFL3-206ENST00000568294 SBNO1A3KN83 1393 aa10.72□□□□□ -0.69
HDGFL3-206ENST00000568294 ZKSCAN1P17029 563 aaPredicted RBP10.72□□□□□ -0.69
HDGFL3-206ENST00000568294 NMIQ13287 307 aaPredicted RBP10.72□□□□□ -0.69
HDGFL3-206ENST00000568294 CDC37L1Q7L3B6 337 aa10.72□□□□□ -0.69
HDGFL3-206ENST00000568294 RIC3Q7Z5B4 369 aa10.72□□□□□ -0.69
HDGFL3-206ENST00000568294 ZNF592Q92610 1267 aa10.72□□□□□ -0.69
HDGFL3-206ENST00000568294 LSG1Q9H089 658 aaKnown RBP10.72□□□□□ -0.69
HDGFL3-206ENST00000568294 RBM8AQ9Y5S9 174 aaKnown RBP10.72□□□□□ -0.69
HDGFL3-206ENST00000568294 IGSF1Q8N6C5 1336 aa10.72□□□□□ -0.69
HDGFL3-206ENST00000568294 GUCY1B3Q02153 619 aa10.72□□□□□ -0.69
HDGFL3-206ENST00000568294 ME3Q16798 604 aa10.72□□□□□ -0.69
HDGFL3-206ENST00000568294 SSH3Q8TE77 659 aa10.72□□□□□ -0.69
HDGFL3-206ENST00000568294 PDLIM2Q96JY6 352 aa10.72□□□□□ -0.69
HDGFL3-206ENST00000568294 LUZP1Q86V48 1076 aa10.71□□□□□ -0.69
HDGFL3-206ENST00000568294 RAB11FIP4Q86YS3 637 aa10.71□□□□□ -0.69
HDGFL3-206ENST00000568294 ERCC4Q92889 916 aaPredicted RBP10.71□□□□□ -0.69
HDGFL3-206ENST00000568294 CCDC85AQ96PX6 553 aaPredicted RBP10.71□□□□□ -0.69
HDGFL3-206ENST00000568294 SALL3Q9BXA9 1300 aa10.71□□□□□ -0.69
HDGFL3-206ENST00000568294 RPAP1Q9BWH6 1393 aaPredicted RBP10.71□□□□□ -0.69
HDGFL3-206ENST00000568294 ATP5J2-PTCD1G3V325 749 aa10.71□□□□□ -0.69
HDGFL3-206ENST00000568294 IGSF3O75054 1194 aa10.71□□□□□ -0.69
HDGFL3-206ENST00000568294 PTCD1O75127 700 aaKnown RBP10.71□□□□□ -0.69
HDGFL3-206ENST00000568294 CDC42BPGQ6DT37 1551 aa10.71□□□□□ -0.69
HDGFL3-206ENST00000568294 GLRX3O76003 335 aaKnown RBP10.71□□□□□ -0.7
HDGFL3-206ENST00000568294 EIF4A1P60842 406 aaKnown RBP10.71□□□□□ -0.7
HDGFL3-206ENST00000568294 GPATCH3Q96I76 525 aa10.71□□□□□ -0.7
HDGFL3-206ENST00000568294 ECHDC1Q9NTX5 307 aa10.71□□□□□ -0.7
HDGFL3-206ENST00000568294 ARHGEF10O15013 1369 aa10.71□□□□□ -0.7
HDGFL3-206ENST00000568294 ANKRD26Q9UPS8 1709 aa10.7□□□□□ -0.7
HDGFL3-206ENST00000568294 SPDYE4A6NLX3 237 aa10.7□□□□□ -0.7
HDGFL3-206ENST00000568294 ANAPC15P60006 121 aa10.7□□□□□ -0.7
HDGFL3-206ENST00000568294 CBX1P83916 185 aa10.7□□□□□ -0.7
HDGFL3-206ENST00000568294 BEND3Q5T5X7 828 aa10.7□□□□□ -0.7
HDGFL3-206ENST00000568294 PDCL3Q9H2J4 239 aa10.7□□□□□ -0.7
HDGFL3-206ENST00000568294 BICC1Q9H694 974 aaKnown RBP10.7□□□□□ -0.7
HDGFL3-206ENST00000568294 OVOS2A0A0J9YW53 1432 aa10.7□□□□□ -0.7
HDGFL3-206ENST00000568294 OVOS2Q6IE36 1432 aa10.7□□□□□ -0.7
HDGFL3-206ENST00000568294 A0A0D9SFI3 127 aa10.7□□□□□ -0.7
HDGFL3-206ENST00000568294 JAK2O60674 1132 aa10.7□□□□□ -0.7
HDGFL3-206ENST00000568294 LIG1P18858 919 aa10.7□□□□□ -0.7
HDGFL3-206ENST00000568294 CHST3Q7LGC8 479 aa10.7□□□□□ -0.7
HDGFL3-206ENST00000568294 SUCLG2Q96I99 432 aa10.7□□□□□ -0.7
HDGFL3-206ENST00000568294 TPCN1Q9ULQ1 816 aa10.7□□□□□ -0.7
HDGFL3-206ENST00000568294 CSB-PGBD3P0DP91 1061 aa10.69□□□□□ -0.7
HDGFL3-206ENST00000568294 RUFY2Q8WXA3 655 aa10.69□□□□□ -0.7
HDGFL3-206ENST00000568294 INTS4Q96HW7 963 aaKnown RBP10.69□□□□□ -0.7
HDGFL3-206ENST00000568294 SEC62Q99442 399 aaKnown RBP10.69□□□□□ -0.7
HDGFL3-206ENST00000568294 UBE2HP62256 183 aa10.69□□□□□ -0.7
HDGFL3-206ENST00000568294 NOLC1Q14978 699 aaKnown RBP eCLIP10.69□□□□□ -0.7
HDGFL3-206ENST00000568294 SASS6Q6UVJ0 657 aa10.69□□□□□ -0.7
HDGFL3-206ENST00000568294 EAF2Q96CJ1 260 aaPredicted RBP10.69□□□□□ -0.7
HDGFL3-206ENST00000568294 NEUROD6Q96NK8 337 aa10.69□□□□□ -0.7
HDGFL3-206ENST00000568294 MYD88Q99836 296 aa10.69□□□□□ -0.7
HDGFL3-206ENST00000568294 STAP2Q9UGK3 403 aa10.69□□□□□ -0.7
HDGFL3-206ENST00000568294 ZHX1Q9UKY1 873 aaPredicted RBP10.69□□□□□ -0.7
HDGFL3-206ENST00000568294 PYCARDQ9ULZ3 195 aa10.69□□□□□ -0.7
HDGFL3-206ENST00000568294 CSPP1Q1MSJ5 1256 aa10.69□□□□□ -0.7
HDGFL3-206ENST00000568294 CREB3L3Q68CJ9 461 aa10.69□□□□□ -0.7
HDGFL3-206ENST00000568294 DDX46Q7L014 1031 aaKnown RBP10.69□□□□□ -0.7
HDGFL3-206ENST00000568294 NLRP2Q9NX02 1062 aa10.69□□□□□ -0.7
HDGFL3-206ENST00000568294 HYPKQ9NX55 129 aa10.69□□□□□ -0.7
HDGFL3-206ENST00000568294 H3BQV1 296 aa10.68□□□□□ -0.7
HDGFL3-206ENST00000568294 PTGS1P23219 599 aa10.68□□□□□ -0.7
HDGFL3-206ENST00000568294 IFFO2Q5TF58 517 aa10.68□□□□□ -0.7
HDGFL3-206ENST00000568294 BLOC1S2Q6QNY1 142 aa10.68□□□□□ -0.7
HDGFL3-206ENST00000568294 DDX17Q92841 729 aaKnown RBP10.68□□□□□ -0.7
HDGFL3-206ENST00000568294 DACT1Q9NYF0 836 aa10.68□□□□□ -0.7
HDGFL3-206ENST00000568294 PHF8Q9UPP1 1060 aa10.68□□□□□ -0.7
HDGFL3-206ENST00000568294 MTMR6Q9Y217 621 aa10.68□□□□□ -0.7
HDGFL3-206ENST00000568294 AP5Z1O43299 807 aa10.68□□□□□ -0.7
HDGFL3-206ENST00000568294 ZNF500O60304 480 aaPredicted RBP10.68□□□□□ -0.7
HDGFL3-206ENST00000568294 LRMPQ12912 555 aa10.68□□□□□ -0.7
HDGFL3-206ENST00000568294 LARP1Q6PKG0 1096 aaKnown RBP10.68□□□□□ -0.7
HDGFL3-206ENST00000568294 ZNF589Q86UQ0 364 aaPredicted RBP10.68□□□□□ -0.7
HDGFL3-206ENST00000568294 C16orf45Q96MC5 204 aaPredicted RBP10.68□□□□□ -0.7
HDGFL3-206ENST00000568294 FTOQ9C0B1 505 aaKnown RBP eCLIP10.68□□□□□ -0.7
HDGFL3-206ENST00000568294 PTPRUQ92729 1446 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms