RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 PDZRN3Q9UPQ7 1066 aa16.96■□□□□ 0.31
TSC2-220ENST00000568238 TNRC6CQ9HCJ0 1690 aaKnown RBP16.96■□□□□ 0.31
TSC2-220ENST00000568238 NUP98P52948 1817 aa16.96■□□□□ 0.3
TSC2-220ENST00000568238 CCDC24Q8N4L8 307 aa16.95■□□□□ 0.3
TSC2-220ENST00000568238 FER1L6Q2WGJ9 1857 aa16.95■□□□□ 0.3
TSC2-220ENST00000568238 KIF3CO14782 793 aa16.94■□□□□ 0.3
TSC2-220ENST00000568238 RGL2O15211 777 aa16.94■□□□□ 0.3
TSC2-220ENST00000568238 EIF4A1P60842 406 aaKnown RBP16.94■□□□□ 0.3
TSC2-220ENST00000568238 RASSF7Q02833 373 aa16.94■□□□□ 0.3
TSC2-220ENST00000568238 DIEXFQ68CQ4 756 aaKnown RBP16.94■□□□□ 0.3
TSC2-220ENST00000568238 ZNF622Q969S3 477 aaKnown RBP eCLIP16.94■□□□□ 0.3
TSC2-220ENST00000568238 RIPK4P57078 832 aa16.93■□□□□ 0.3
TSC2-220ENST00000568238 LMOD3Q0VAK6 560 aa16.93■□□□□ 0.3
TSC2-220ENST00000568238 NBPF5PQ86XG9 351 aaPredicted RBP16.93■□□□□ 0.3
TSC2-220ENST00000568238 SLX4Q8IY92 1834 aa16.93■□□□□ 0.3
TSC2-220ENST00000568238 DICER1Q9UPY3 1922 aaKnown RBP16.92■□□□□ 0.3
TSC2-220ENST00000568238 TSPYL4Q9UJ04 414 aa16.92■□□□□ 0.3
TSC2-220ENST00000568238 TMPOP42166 694 aaKnown RBP16.91■□□□□ 0.3
TSC2-220ENST00000568238 WDR43Q15061 677 aaKnown RBP eCLIP16.91■□□□□ 0.3
TSC2-220ENST00000568238 NIP7Q9Y221 180 aaKnown RBP eCLIP16.91■□□□□ 0.3
TSC2-220ENST00000568238 KDM2BQ8NHM5 1336 aa16.91■□□□□ 0.3
TSC2-220ENST00000568238 ZC3H4Q9UPT8 1303 aaKnown RBP16.91■□□□□ 0.3
TSC2-220ENST00000568238 LMNB1P20700 586 aa16.9■□□□□ 0.3
TSC2-220ENST00000568238 CCDC146Q8IYE0 955 aa16.9■□□□□ 0.3
TSC2-220ENST00000568238 NMRK2Q9NPI5 230 aa16.9■□□□□ 0.3
TSC2-220ENST00000568238 NFKBIEO00221 500 aa16.89■□□□□ 0.29
TSC2-220ENST00000568238 HLFQ16534 295 aa16.89■□□□□ 0.29
TSC2-220ENST00000568238 CCDC184Q52MB2 194 aa16.89■□□□□ 0.29
TSC2-220ENST00000568238 STYK1Q6J9G0 422 aa16.89■□□□□ 0.29
TSC2-220ENST00000568238 KIF6Q6ZMV9 814 aa16.89■□□□□ 0.29
TSC2-220ENST00000568238 NGEFQ8N5V2 710 aa16.89■□□□□ 0.29
TSC2-220ENST00000568238 CNKSR1Q969H4 720 aa16.89■□□□□ 0.29
TSC2-220ENST00000568238 BABAM1Q9NWV8 329 aa16.89■□□□□ 0.29
TSC2-220ENST00000568238 RRP7AQ9Y3A4 280 aaKnown RBP16.89■□□□□ 0.29
TSC2-220ENST00000568238 ERBB4Q15303 1308 aa16.89■□□□□ 0.29
TSC2-220ENST00000568238 MAP3K15Q6ZN16 1313 aa16.89■□□□□ 0.29
TSC2-220ENST00000568238 SRGNP10124 158 aa16.88■□□□□ 0.29
TSC2-220ENST00000568238 MYL6BP14649 208 aa16.88■□□□□ 0.29
TSC2-220ENST00000568238 HSPA6P17066 643 aa16.88■□□□□ 0.29
TSC2-220ENST00000568238 TPTE2Q6XPS3 522 aa16.88■□□□□ 0.29
TSC2-220ENST00000568238 RUNDC1Q96C34 613 aa16.88■□□□□ 0.29
TSC2-220ENST00000568238 MASTLQ96GX5 879 aa16.88■□□□□ 0.29
TSC2-220ENST00000568238 ZNF219Q9P2Y4 722 aaPredicted RBP16.88■□□□□ 0.29
TSC2-220ENST00000568238 ANKRD36CQ5JPF3 1778 aa16.87■□□□□ 0.29
TSC2-220ENST00000568238 ERVV-1B6SEH8 477 aa16.87■□□□□ 0.29
TSC2-220ENST00000568238 C21orf2O43822 256 aa16.87■□□□□ 0.29
TSC2-220ENST00000568238 TOMM70O94826 608 aa16.87■□□□□ 0.29
TSC2-220ENST00000568238 PRPF40BQ6NWY9 871 aaKnown RBP16.87■□□□□ 0.29
TSC2-220ENST00000568238 FAM177BA6PVY3 158 aa16.86■□□□□ 0.29
TSC2-220ENST00000568238 PRELPP51888 382 aa16.86■□□□□ 0.29
TSC2-220ENST00000568238 NEUROD2Q15784 382 aa16.86■□□□□ 0.29
TSC2-220ENST00000568238 TTLL7Q6ZT98 887 aa16.86■□□□□ 0.29
TSC2-220ENST00000568238 MRS2Q9HD23 443 aa16.86■□□□□ 0.29
TSC2-220ENST00000568238 GTF2E1P29083 439 aaPredicted RBP16.85■□□□□ 0.29
TSC2-220ENST00000568238 SOGA3Q5TF21 947 aa16.85■□□□□ 0.29
TSC2-220ENST00000568238 C16orf71Q8IYS4 520 aaPredicted RBP16.85■□□□□ 0.29
TSC2-220ENST00000568238 NYXQ9GZU5 481 aa16.85■□□□□ 0.29
TSC2-220ENST00000568238 ZBTB3Q9H5J0 574 aa16.85■□□□□ 0.29
TSC2-220ENST00000568238 IBTKQ9P2D0 1353 aaPredicted RBP16.85■□□□□ 0.29
TSC2-220ENST00000568238 KLRG2A4D1S0 409 aaPredicted RBP16.84■□□□□ 0.29
TSC2-220ENST00000568238 NPR1P16066 1061 aa16.84■□□□□ 0.29
TSC2-220ENST00000568238 TAOK3Q9H2K8 898 aa16.84■□□□□ 0.29
TSC2-220ENST00000568238 ADAMTS8Q9UP79 889 aa16.84■□□□□ 0.29
TSC2-220ENST00000568238 LTBP3Q9NS15 1303 aa16.84■□□□□ 0.29
TSC2-220ENST00000568238 ABCC12Q96J65 1359 aa16.84■□□□□ 0.29
TSC2-220ENST00000568238 EIF2S2P20042 333 aaKnown RBP16.83■□□□□ 0.28
TSC2-220ENST00000568238 RIC1Q4ADV7 1423 aa16.83■□□□□ 0.28
TSC2-220ENST00000568238 UBN2Q6ZU65 1347 aa16.83■□□□□ 0.28
TSC2-220ENST00000568238 TRIM35Q9UPQ4 493 aa16.83■□□□□ 0.28
TSC2-220ENST00000568238 WDR90Q96KV7 1748 aa16.82■□□□□ 0.28
TSC2-220ENST00000568238 GLTPD2A6NH11 291 aa16.82■□□□□ 0.28
TSC2-220ENST00000568238 GPTP24298 496 aa16.82■□□□□ 0.28
TSC2-220ENST00000568238 RBM46Q8TBY0 533 aaKnown RBP16.82■□□□□ 0.28
TSC2-220ENST00000568238 RRAGCQ9HB90 399 aa16.82■□□□□ 0.28
TSC2-220ENST00000568238 PDIA6Q15084 440 aa16.81■□□□□ 0.28
TSC2-220ENST00000568238 PROSER3Q2NL68 480 aa16.81■□□□□ 0.28
TSC2-220ENST00000568238 LRP10Q7Z4F1 713 aa16.81■□□□□ 0.28
TSC2-220ENST00000568238 NUTM1Q86Y26 1132 aa16.81■□□□□ 0.28
TSC2-220ENST00000568238 LAS1LQ9Y4W2 734 aaKnown RBP16.81■□□□□ 0.28
TSC2-220ENST00000568238 CHL1O00533 1208 aa16.8■□□□□ 0.28
TSC2-220ENST00000568238 ERFEQ4G0M1 354 aa16.8■□□□□ 0.28
TSC2-220ENST00000568238 CCDC93Q567U6 631 aa16.8■□□□□ 0.28
TSC2-220ENST00000568238 GIGYF2Q6Y7W6 1299 aaKnown RBP16.8■□□□□ 0.28
TSC2-220ENST00000568238 MIER1Q8N108 512 aa16.8■□□□□ 0.28
TSC2-220ENST00000568238 ANXA1P04083 346 aa16.79■□□□□ 0.28
TSC2-220ENST00000568238 APLP1P51693 650 aa16.79■□□□□ 0.28
TSC2-220ENST00000568238 CRY2Q49AN0 593 aa16.79■□□□□ 0.28
TSC2-220ENST00000568238 ZNF34Q8IZ26 560 aa16.79■□□□□ 0.28
TSC2-220ENST00000568238 C7orf43Q8WVR3 580 aa16.79■□□□□ 0.28
TSC2-220ENST00000568238 NECTIN2Q92692 538 aa16.79■□□□□ 0.28
TSC2-220ENST00000568238 ALDH1B1P30837 517 aa16.78■□□□□ 0.28
TSC2-220ENST00000568238 FSTL1Q12841 308 aa16.78■□□□□ 0.28
TSC2-220ENST00000568238 KRT24Q2M2I5 525 aa16.78■□□□□ 0.28
TSC2-220ENST00000568238 PARP10Q53GL7 1025 aa16.78■□□□□ 0.28
TSC2-220ENST00000568238 SUSD4Q5VX71 490 aa16.78■□□□□ 0.28
TSC2-220ENST00000568238 LAMB2P55268 1798 aa16.78■□□□□ 0.28
TSC2-220ENST00000568238 NTSR2O95665 410 aa16.77■□□□□ 0.28
TSC2-220ENST00000568238 VEGFAP15692 232 aaPredicted RBP16.77■□□□□ 0.28
TSC2-220ENST00000568238 DPY19L2Q6NUT2 758 aa16.77■□□□□ 0.28
TSC2-220ENST00000568238 PPP1R42Q7Z4L9 355 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms