RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 MRS2Q9HD23 443 aa10.7□□□□□ -0.7
HDGFL3-205ENST00000568129 PDZRN3Q9UPQ7 1066 aa10.7□□□□□ -0.7
HDGFL3-205ENST00000568129 CCDC88AQ3V6T2 1871 aa10.7□□□□□ -0.7
HDGFL3-205ENST00000568129 GNAI1P63096 354 aa10.69□□□□□ -0.7
HDGFL3-205ENST00000568129 HLFQ16534 295 aa10.69□□□□□ -0.7
HDGFL3-205ENST00000568129 PRR5LQ6MZQ0 368 aa10.69□□□□□ -0.7
HDGFL3-205ENST00000568129 NPM2Q86SE8 214 aaKnown RBP10.69□□□□□ -0.7
HDGFL3-205ENST00000568129 WWC1Q8IX03 1113 aa10.69□□□□□ -0.7
HDGFL3-205ENST00000568129 NGEFQ8N5V2 710 aa10.69□□□□□ -0.7
HDGFL3-205ENST00000568129 MBIPQ9NS73 344 aa10.69□□□□□ -0.7
HDGFL3-205ENST00000568129 PIM2Q9P1W9 311 aa10.69□□□□□ -0.7
HDGFL3-205ENST00000568129 ZNF652Q9Y2D9 606 aa10.69□□□□□ -0.7
HDGFL3-205ENST00000568129 ATP10DQ9P241 1426 aa10.68□□□□□ -0.7
HDGFL3-205ENST00000568129 FER1L6Q2WGJ9 1857 aa10.68□□□□□ -0.7
HDGFL3-205ENST00000568129 IL16Q14005 1332 aa10.68□□□□□ -0.7
HDGFL3-205ENST00000568129 COL11A2P13942 1736 aaPredicted RBP10.68□□□□□ -0.7
HDGFL3-205ENST00000568129 TTLL7Q6ZT98 887 aa10.68□□□□□ -0.7
HDGFL3-205ENST00000568129 ZNF34Q8IZ26 560 aa10.68□□□□□ -0.7
HDGFL3-205ENST00000568129 DDX21Q9NR30 783 aaKnown RBP eCLIP10.68□□□□□ -0.7
HDGFL3-205ENST00000568129 DICER1Q9UPY3 1922 aaKnown RBP10.68□□□□□ -0.7
HDGFL3-205ENST00000568129 SLX4Q8IY92 1834 aa10.68□□□□□ -0.7
HDGFL3-205ENST00000568129 ADCY9O60503 1353 aa10.67□□□□□ -0.7
HDGFL3-205ENST00000568129 IBTKQ9P2D0 1353 aaPredicted RBP10.67□□□□□ -0.7
HDGFL3-205ENST00000568129 KRT24Q2M2I5 525 aa10.67□□□□□ -0.7
HDGFL3-205ENST00000568129 GIGYF2Q6Y7W6 1299 aaKnown RBP10.67□□□□□ -0.7
HDGFL3-205ENST00000568129 ZNF330Q9Y3S2 320 aaPredicted RBP10.67□□□□□ -0.7
HDGFL3-205ENST00000568129 RIC1Q4ADV7 1423 aa10.67□□□□□ -0.7
HDGFL3-205ENST00000568129 CHRNA5P30532 468 aa10.66□□□□□ -0.7
HDGFL3-205ENST00000568129 PDE6BP35913 854 aa10.66□□□□□ -0.7
HDGFL3-205ENST00000568129 PROSER3Q2NL68 480 aa10.66□□□□□ -0.7
HDGFL3-205ENST00000568129 DUSP27Q5VZP5 1158 aa10.66□□□□□ -0.7
HDGFL3-205ENST00000568129 TPTE2Q6XPS3 522 aa10.66□□□□□ -0.7
HDGFL3-205ENST00000568129 BICDL1Q6ZP65 573 aa10.66□□□□□ -0.7
HDGFL3-205ENST00000568129 WDR63Q8IWG1 891 aa10.66□□□□□ -0.7
HDGFL3-205ENST00000568129 CACNA1SQ13698 1873 aa10.66□□□□□ -0.7
HDGFL3-205ENST00000568129 H0YIN7 160 aa10.65□□□□□ -0.7
HDGFL3-205ENST00000568129 SRGNP10124 158 aa10.65□□□□□ -0.7
HDGFL3-205ENST00000568129 MYL6BP14649 208 aa10.65□□□□□ -0.7
HDGFL3-205ENST00000568129 EIF2S2P20042 333 aaKnown RBP10.65□□□□□ -0.7
HDGFL3-205ENST00000568129 DALRD3Q5D0E6 543 aaKnown RBP10.65□□□□□ -0.7
HDGFL3-205ENST00000568129 PELP1Q8IZL8 1130 aaKnown RBP10.65□□□□□ -0.7
HDGFL3-205ENST00000568129 CNBD1Q8NA66 436 aa10.65□□□□□ -0.7
HDGFL3-205ENST00000568129 ZNF784Q8NCA9 323 aaPredicted RBP10.65□□□□□ -0.7
HDGFL3-205ENST00000568129 DBF4Q9UBU7 674 aaPredicted RBP10.65□□□□□ -0.7
HDGFL3-205ENST00000568129 NIP7Q9Y221 180 aaKnown RBP eCLIP10.65□□□□□ -0.7
HDGFL3-205ENST00000568129 BCS1LQ9Y276 419 aa10.65□□□□□ -0.7
HDGFL3-205ENST00000568129 LAS1LQ9Y4W2 734 aaKnown RBP10.65□□□□□ -0.7
HDGFL3-205ENST00000568129 UBN2Q6ZU65 1347 aa10.64□□□□□ -0.71
HDGFL3-205ENST00000568129 STYK1Q6J9G0 422 aa10.64□□□□□ -0.71
HDGFL3-205ENST00000568129 KIF6Q6ZMV9 814 aa10.64□□□□□ -0.71
HDGFL3-205ENST00000568129 COPS6Q7L5N1 327 aa10.64□□□□□ -0.71
HDGFL3-205ENST00000568129 C2CD5Q86YS7 1000 aa10.64□□□□□ -0.71
HDGFL3-205ENST00000568129 C8orf58Q8NAV2 365 aa10.64□□□□□ -0.71
HDGFL3-205ENST00000568129 LAMB2P55268 1798 aa10.64□□□□□ -0.71
HDGFL3-205ENST00000568129 ZNF521Q96K83 1311 aa10.63□□□□□ -0.71
HDGFL3-205ENST00000568129 CCER2I3L3R5 266 aa10.63□□□□□ -0.71
HDGFL3-205ENST00000568129 ST5P78524 1137 aa10.63□□□□□ -0.71
HDGFL3-205ENST00000568129 CRY2Q49AN0 593 aa10.63□□□□□ -0.71
HDGFL3-205ENST00000568129 SLC10A5Q5PT55 438 aa10.63□□□□□ -0.71
HDGFL3-205ENST00000568129 HDGFL1Q5TGJ6 251 aa10.63□□□□□ -0.71
HDGFL3-205ENST00000568129 NBPF5PQ86XG9 351 aaPredicted RBP10.63□□□□□ -0.71
HDGFL3-205ENST00000568129 TTLL6Q8N841 843 aa10.63□□□□□ -0.71
HDGFL3-205ENST00000568129 C7orf43Q8WVR3 580 aa10.63□□□□□ -0.71
HDGFL3-205ENST00000568129 CHMP4AQ9BY43 222 aa10.63□□□□□ -0.71
HDGFL3-205ENST00000568129 NYXQ9GZU5 481 aa10.63□□□□□ -0.71
HDGFL3-205ENST00000568129 HYPKQ9NX55 129 aa10.63□□□□□ -0.71
HDGFL3-205ENST00000568129 CHPF2Q9P2E5 772 aa10.63□□□□□ -0.71
HDGFL3-205ENST00000568129 TNRC6CQ9HCJ0 1690 aaKnown RBP10.63□□□□□ -0.71
HDGFL3-205ENST00000568129 ANXA1P04083 346 aa10.62□□□□□ -0.71
HDGFL3-205ENST00000568129 TRIM28Q13263 835 aaKnown RBP10.62□□□□□ -0.71
HDGFL3-205ENST00000568129 TCIRG1Q13488 830 aa10.62□□□□□ -0.71
HDGFL3-205ENST00000568129 PARP10Q53GL7 1025 aa10.62□□□□□ -0.71
HDGFL3-205ENST00000568129 HSP90AB3PQ58FF7 597 aa10.62□□□□□ -0.71
HDGFL3-205ENST00000568129 SUSD4Q5VX71 490 aa10.62□□□□□ -0.71
HDGFL3-205ENST00000568129 XAGE3Q8WTP9 111 aa10.62□□□□□ -0.71
HDGFL3-205ENST00000568129 MASTLQ96GX5 879 aa10.62□□□□□ -0.71
HDGFL3-205ENST00000568129 ZBTB3Q9H5J0 574 aa10.62□□□□□ -0.71
HDGFL3-205ENST00000568129 RNF123Q5XPI4 1314 aa10.61□□□□□ -0.71
HDGFL3-205ENST00000568129 NTSR2O95665 410 aa10.61□□□□□ -0.71
HDGFL3-205ENST00000568129 HOXA10P31260 410 aaPredicted RBP10.61□□□□□ -0.71
HDGFL3-205ENST00000568129 ANKRD13DQ6ZTN6 518 aa10.61□□□□□ -0.71
HDGFL3-205ENST00000568129 TSPYL6Q8N831 410 aa10.61□□□□□ -0.71
HDGFL3-205ENST00000568129 PLBD2Q8NHP8 589 aa10.61□□□□□ -0.71
HDGFL3-205ENST00000568129 CNKSR1Q969H4 720 aa10.61□□□□□ -0.71
HDGFL3-205ENST00000568129 DDX60Q8IY21 1712 aaKnown RBP10.61□□□□□ -0.71
HDGFL3-205ENST00000568129 NPR1P16066 1061 aa10.6□□□□□ -0.71
HDGFL3-205ENST00000568129 CCDC30Q5VVM6 783 aa10.6□□□□□ -0.71
HDGFL3-205ENST00000568129 ARHGAP27Q6ZUM4 889 aa10.6□□□□□ -0.71
HDGFL3-205ENST00000568129 PPP1R42Q7Z4L9 355 aa10.6□□□□□ -0.71
HDGFL3-205ENST00000568129 NLRP10Q86W26 655 aa10.6□□□□□ -0.71
HDGFL3-205ENST00000568129 CCDC24Q8N4L8 307 aa10.6□□□□□ -0.71
HDGFL3-205ENST00000568129 NECTIN2Q92692 538 aa10.6□□□□□ -0.71
HDGFL3-205ENST00000568129 ISCA1Q9BUE6 129 aa10.6□□□□□ -0.71
HDGFL3-205ENST00000568129 WWC3Q9ULE0 1092 aa10.6□□□□□ -0.71
HDGFL3-205ENST00000568129 LTBP3Q9NS15 1303 aa10.59□□□□□ -0.71
HDGFL3-205ENST00000568129 SNED1Q8TER0 1413 aa10.59□□□□□ -0.71
HDGFL3-205ENST00000568129 ERFEQ4G0M1 354 aa10.59□□□□□ -0.71
HDGFL3-205ENST00000568129 FAM9BQ8IZU0 186 aa10.59□□□□□ -0.71
HDGFL3-205ENST00000568129 TSR2Q969E8 191 aaKnown RBP10.59□□□□□ -0.71
HDGFL3-205ENST00000568129 SPINK5Q9NQ38 1064 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms