RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 TNS2Q63HR2 1409 aa21.65■■□□□ 1.06
CMTM3-214ENST00000567572 LRP10Q7Z4F1 713 aa21.65■■□□□ 1.06
CMTM3-214ENST00000567572 USP16Q9Y5T5 823 aa21.65■■□□□ 1.06
CMTM3-214ENST00000567572 WNK3Q9BYP7 1800 aa21.65■■□□□ 1.06
CMTM3-214ENST00000567572 APBB1O00213 710 aa21.65■■□□□ 1.06
CMTM3-214ENST00000567572 RAB11FIP3O75154 756 aa21.65■■□□□ 1.06
CMTM3-214ENST00000567572 NBPF7P0C2Y1 421 aaPredicted RBP21.65■■□□□ 1.06
CMTM3-214ENST00000567572 IL17RAQ96F46 866 aa21.65■■□□□ 1.06
CMTM3-214ENST00000567572 MCM2P49736 904 aa21.64■■□□□ 1.05
CMTM3-214ENST00000567572 ANAPC15P60006 121 aa21.64■■□□□ 1.05
CMTM3-214ENST00000567572 SSH3Q8TE77 659 aa21.64■■□□□ 1.05
CMTM3-214ENST00000567572 XRCC6P12956 609 aaKnown RBP eCLIP21.63■■□□□ 1.05
CMTM3-214ENST00000567572 EXOC6BQ9Y2D4 811 aa21.63■■□□□ 1.05
CMTM3-214ENST00000567572 NRAPQ86VF7 1730 aa21.63■■□□□ 1.05
CMTM3-214ENST00000567572 MCCP23508 829 aa21.63■■□□□ 1.05
CMTM3-214ENST00000567572 CYP2E1P05181 493 aaPredicted RBP21.62■■□□□ 1.05
CMTM3-214ENST00000567572 POLA2Q14181 598 aa21.62■■□□□ 1.05
CMTM3-214ENST00000567572 LINS1Q8NG48 757 aa21.62■■□□□ 1.05
CMTM3-214ENST00000567572 MYL6BP14649 208 aa21.61■■□□□ 1.05
CMTM3-214ENST00000567572 ESYT1Q9BSJ8 1104 aa21.61■■□□□ 1.05
CMTM3-214ENST00000567572 AIMP1Q12904 312 aaKnown RBP21.61■■□□□ 1.05
CMTM3-214ENST00000567572 XAGE3Q8WTP9 111 aa21.61■■□□□ 1.05
CMTM3-214ENST00000567572 GZF1Q9H116 711 aaPredicted RBP21.61■■□□□ 1.05
CMTM3-214ENST00000567572 ERBB4Q15303 1308 aa21.6■■□□□ 1.05
CMTM3-214ENST00000567572 UTYO14607 1347 aa21.59■■□□□ 1.05
CMTM3-214ENST00000567572 LRP6O75581 1613 aa21.59■■□□□ 1.05
CMTM3-214ENST00000567572 SSFA2P28290 1259 aa21.59■■□□□ 1.05
CMTM3-214ENST00000567572 CWF19L2Q2TBE0 894 aaKnown RBP21.59■■□□□ 1.05
CMTM3-214ENST00000567572 COPS6Q7L5N1 327 aa21.59■■□□□ 1.05
CMTM3-214ENST00000567572 PPP1R42Q7Z4L9 355 aa21.59■■□□□ 1.05
CMTM3-214ENST00000567572 RTN4Q9NQC3 1192 aaKnown RBP21.59■■□□□ 1.05
CMTM3-214ENST00000567572 TOM1O60784 492 aa21.59■■□□□ 1.05
CMTM3-214ENST00000567572 KLHL40Q2TBA0 621 aa21.59■■□□□ 1.05
CMTM3-214ENST00000567572 BAG4O95429 457 aaKnown RBP21.58■■□□□ 1.04
CMTM3-214ENST00000567572 MTX1Q13505 466 aa21.58■■□□□ 1.04
CMTM3-214ENST00000567572 HSP90AB4PQ58FF6 505 aa21.58■■□□□ 1.04
CMTM3-214ENST00000567572 RIC3Q7Z5B4 369 aa21.58■■□□□ 1.04
CMTM3-214ENST00000567572 GRPEL1Q9HAV7 217 aa21.58■■□□□ 1.04
CMTM3-214ENST00000567572 C9orf78Q9NZ63 289 aaPredicted RBP21.57■■□□□ 1.04
CMTM3-214ENST00000567572 ARFGEF2Q9Y6D5 1785 aa21.57■■□□□ 1.04
CMTM3-214ENST00000567572 IGKV5-2P06315 115 aa21.57■■□□□ 1.04
CMTM3-214ENST00000567572 CHMLP26374 656 aa21.57■■□□□ 1.04
CMTM3-214ENST00000567572 FOXD4L1Q9NU39 408 aa21.57■■□□□ 1.04
CMTM3-214ENST00000567572 HDAC5Q9UQL6 1122 aa21.57■■□□□ 1.04
CMTM3-214ENST00000567572 METTL22Q9BUU2 404 aaPredicted RBP21.56■■□□□ 1.04
CMTM3-214ENST00000567572 TMOD3Q9NYL9 352 aa21.56■■□□□ 1.04
CMTM3-214ENST00000567572 ITGB4P16144 1822 aa21.56■■□□□ 1.04
CMTM3-214ENST00000567572 GRM8O00222 908 aa21.55■■□□□ 1.04
CMTM3-214ENST00000567572 SRGAP3O43295 1099 aa21.55■■□□□ 1.04
CMTM3-214ENST00000567572 PIP4K2AP48426 406 aaPredicted RBP21.55■■□□□ 1.04
CMTM3-214ENST00000567572 ANKRD13DQ6ZTN6 518 aa21.55■■□□□ 1.04
CMTM3-214ENST00000567572 NWD2Q9ULI1 1742 aa21.55■■□□□ 1.04
CMTM3-214ENST00000567572 NBPF26B4DH59 902 aa21.54■■□□□ 1.04
CMTM3-214ENST00000567572 ADAMTS2O95450 1211 aa21.54■■□□□ 1.04
CMTM3-214ENST00000567572 PIP4K2BP78356 416 aa21.54■■□□□ 1.04
CMTM3-214ENST00000567572 NEXNQ0ZGT2 675 aa21.54■■□□□ 1.04
CMTM3-214ENST00000567572 NBPF14Q5TI25 921 aa21.54■■□□□ 1.04
CMTM3-214ENST00000567572 NBPF10Q6P3W6 841 aaKnown RBP21.54■■□□□ 1.04
CMTM3-214ENST00000567572 NBPF15Q8N660 670 aa21.54■■□□□ 1.04
CMTM3-214ENST00000567572 KIF1BPQ96EK5 621 aa21.54■■□□□ 1.04
CMTM3-214ENST00000567572 NEURL1BA8MQ27 555 aa21.53■■□□□ 1.04
CMTM3-214ENST00000567572 SPATA31A1Q5TZJ5 1347 aa21.52■■□□□ 1.04
CMTM3-214ENST00000567572 USP42Q9H9J4 1324 aaKnown RBP21.52■■□□□ 1.04
CMTM3-214ENST00000567572 NUP188Q5SRE5 1749 aa21.52■■□□□ 1.04
CMTM3-214ENST00000567572 PTCD1O75127 700 aaKnown RBP21.52■■□□□ 1.04
CMTM3-214ENST00000567572 PIGBQ92521 554 aa21.52■■□□□ 1.04
CMTM3-214ENST00000567572 INTS4Q96HW7 963 aaKnown RBP21.52■■□□□ 1.04
CMTM3-214ENST00000567572 GCKRQ14397 625 aa21.51■■□□□ 1.03
CMTM3-214ENST00000567572 PLBD2Q8NHP8 589 aa21.51■■□□□ 1.03
CMTM3-214ENST00000567572 MYD88Q99836 296 aa21.51■■□□□ 1.03
CMTM3-214ENST00000567572 SLIT2O94813 1529 aa21.51■■□□□ 1.03
CMTM3-214ENST00000567572 TRIM6-TRIM34B2RNG4 842 aa21.51■■□□□ 1.03
CMTM3-214ENST00000567572 BCL9O00512 1426 aa21.51■■□□□ 1.03
CMTM3-214ENST00000567572 SURF6O75683 361 aaKnown RBP21.51■■□□□ 1.03
CMTM3-214ENST00000567572 CUL4AQ13619 759 aa21.51■■□□□ 1.03
CMTM3-214ENST00000567572 RHPN1Q8TCX5 695 aa21.51■■□□□ 1.03
CMTM3-214ENST00000567572 KAZALD1Q96I82 304 aa21.51■■□□□ 1.03
CMTM3-214ENST00000567572 CDCA7Q9BWT1 371 aaPredicted RBP21.51■■□□□ 1.03
CMTM3-214ENST00000567572 AFDNP55196 1824 aaKnown RBP21.5■■□□□ 1.03
CMTM3-214ENST00000567572 EXOC5O00471 708 aa21.5■■□□□ 1.03
CMTM3-214ENST00000567572 SUCLG2Q96I99 432 aa21.5■■□□□ 1.03
CMTM3-214ENST00000567572 THRAP3Q9Y2W1 955 aaKnown RBP21.5■■□□□ 1.03
CMTM3-214ENST00000567572 NEK4P51957 841 aa21.49■■□□□ 1.03
CMTM3-214ENST00000567572 VSIG10Q8N0Z9 540 aa21.49■■□□□ 1.03
CMTM3-214ENST00000567572 RILPL2Q969X0 211 aa21.49■■□□□ 1.03
CMTM3-214ENST00000567572 ASAP1Q9ULH1 1129 aa21.49■■□□□ 1.03
CMTM3-214ENST00000567572 DDX49Q9Y6V7 483 aaKnown RBP21.49■■□□□ 1.03
CMTM3-214ENST00000567572 TTC41PQ6P2S7 1318 aa21.48■■□□□ 1.03
CMTM3-214ENST00000567572 A1BGP04217 495 aa21.48■■□□□ 1.03
CMTM3-214ENST00000567572 ANO2Q9NQ90 1003 aa21.48■■□□□ 1.03
CMTM3-214ENST00000567572 ATG3Q9NT62 314 aa21.48■■□□□ 1.03
CMTM3-214ENST00000567572 PI4K2BQ8TCG2 481 aa21.47■■□□□ 1.03
CMTM3-214ENST00000567572 TMX3Q96JJ7 454 aa21.47■■□□□ 1.03
CMTM3-214ENST00000567572 DOT1LQ8TEK3 1739 aa21.47■■□□□ 1.03
CMTM3-214ENST00000567572 COL15A1P39059 1388 aa21.47■■□□□ 1.03
CMTM3-214ENST00000567572 NUTM2BA6NNL0 878 aaPredicted RBP21.47■■□□□ 1.03
CMTM3-214ENST00000567572 NUTM2EB1AL46 878 aaPredicted RBP21.47■■□□□ 1.03
CMTM3-214ENST00000567572 TSHZ3Q63HK5 1081 aa21.47■■□□□ 1.03
CMTM3-214ENST00000567572 NUTM2AQ8IVF1 878 aaPredicted RBP21.47■■□□□ 1.03
CMTM3-214ENST00000567572 PANK2Q9BZ23 570 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms