RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 F13A1P00488 732 aa25.91■■□□□ 1.74
SPSB3-208ENST00000566339 PPP1R42Q7Z4L9 355 aa25.91■■□□□ 1.74
SPSB3-208ENST00000566339 MYRIPQ8NFW9 859 aa25.91■■□□□ 1.74
SPSB3-208ENST00000566339 SURF6O75683 361 aaKnown RBP25.9■■□□□ 1.74
SPSB3-208ENST00000566339 MTX1Q13505 466 aa25.9■■□□□ 1.74
SPSB3-208ENST00000566339 VPS53Q5VIR6 699 aa25.9■■□□□ 1.74
SPSB3-208ENST00000566339 C14orf37Q86TY3 774 aa25.9■■□□□ 1.74
SPSB3-208ENST00000566339 SMC3Q9UQE7 1217 aa25.9■■□□□ 1.74
SPSB3-208ENST00000566339 CEMIPQ8WUJ3 1361 aa25.9■■□□□ 1.74
SPSB3-208ENST00000566339 GTF2F1P35269 517 aaKnown RBP eCLIP25.9■■□□□ 1.74
SPSB3-208ENST00000566339 HDGFL1Q5TGJ6 251 aa25.9■■□□□ 1.74
SPSB3-208ENST00000566339 IL17REQ8NFR9 667 aa25.89■■□□□ 1.73
SPSB3-208ENST00000566339 PKNOX2Q96KN3 472 aa25.89■■□□□ 1.73
SPSB3-208ENST00000566339 SPTLC3Q9NUV7 552 aa25.89■■□□□ 1.73
SPSB3-208ENST00000566339 HOXC9P31274 260 aa25.88■■□□□ 1.73
SPSB3-208ENST00000566339 AK2P54819 239 aa25.88■■□□□ 1.73
SPSB3-208ENST00000566339 SYT1P21579 422 aa25.87■■□□□ 1.73
SPSB3-208ENST00000566339 FUCA2Q9BTY2 467 aa25.87■■□□□ 1.73
SPSB3-208ENST00000566339 KDM4AO75164 1064 aa25.87■■□□□ 1.73
SPSB3-208ENST00000566339 NFAT5O94916 1531 aa25.87■■□□□ 1.73
SPSB3-208ENST00000566339 ADGRL3Q9HAR2 1447 aa25.86■■□□□ 1.73
SPSB3-208ENST00000566339 KDM3BQ7LBC6 1761 aa25.86■■□□□ 1.73
SPSB3-208ENST00000566339 SOX12O15370 315 aa25.86■■□□□ 1.73
SPSB3-208ENST00000566339 RUFY3Q7L099 469 aa25.86■■□□□ 1.73
SPSB3-208ENST00000566339 ERC1Q8IUD2 1116 aa25.86■■□□□ 1.73
SPSB3-208ENST00000566339 IL1RAPL2Q9NP60 686 aa25.86■■□□□ 1.73
SPSB3-208ENST00000566339 FAM13BQ9NYF5 915 aa25.86■■□□□ 1.73
SPSB3-208ENST00000566339 USP25Q9UHP3 1055 aa25.86■■□□□ 1.73
SPSB3-208ENST00000566339 CCDC171Q6TFL3 1326 aa25.86■■□□□ 1.73
SPSB3-208ENST00000566339 HIP1O00291 1037 aa25.85■■□□□ 1.73
SPSB3-208ENST00000566339 NOL8Q76FK4 1167 aaKnown RBP25.85■■□□□ 1.73
SPSB3-208ENST00000566339 NUTM1Q86Y26 1132 aa25.85■■□□□ 1.73
SPSB3-208ENST00000566339 GPATCH3Q96I76 525 aa25.85■■□□□ 1.73
SPSB3-208ENST00000566339 IL25Q9H293 177 aa25.84■■□□□ 1.73
SPSB3-208ENST00000566339 CNPY2Q9Y2B0 182 aa25.84■■□□□ 1.73
SPSB3-208ENST00000566339 ADCY5O95622 1261 aa25.84■■□□□ 1.73
SPSB3-208ENST00000566339 NOLC1Q14978 699 aaKnown RBP eCLIP25.84■■□□□ 1.73
SPSB3-208ENST00000566339 ZSWIM6Q9HCJ5 1215 aa25.84■■□□□ 1.73
SPSB3-208ENST00000566339 SRGAP3O43295 1099 aa25.83■■□□□ 1.73
SPSB3-208ENST00000566339 BEND3Q5T5X7 828 aa25.83■■□□□ 1.73
SPSB3-208ENST00000566339 HYPKQ9NX55 129 aa25.83■■□□□ 1.73
SPSB3-208ENST00000566339 LMO7Q8WWI1 1683 aa25.82■■□□□ 1.72
SPSB3-208ENST00000566339 NLRP6P59044 892 aa25.82■■□□□ 1.72
SPSB3-208ENST00000566339 RBM10P98175 930 aaKnown RBP25.82■■□□□ 1.72
SPSB3-208ENST00000566339 DNAAF4Q8WXU2 420 aa25.82■■□□□ 1.72
SPSB3-208ENST00000566339 ALDH1L1O75891 902 aa25.82■■□□□ 1.72
SPSB3-208ENST00000566339 ALDH8A1Q9H2A2 487 aaPredicted RBP25.82■■□□□ 1.72
SPSB3-208ENST00000566339 GDPD2Q9HCC8 539 aa25.82■■□□□ 1.72
SPSB3-208ENST00000566339 SNRKQ9NRH2 765 aa25.82■■□□□ 1.72
SPSB3-208ENST00000566339 DIAPH3Q9NSV4 1193 aa25.82■■□□□ 1.72
SPSB3-208ENST00000566339 ELP1O95163 1332 aa25.81■■□□□ 1.72
SPSB3-208ENST00000566339 GOLGA6L6A8MZA4 724 aa25.81■■□□□ 1.72
SPSB3-208ENST00000566339 SLAIN2Q9P270 581 aa25.81■■□□□ 1.72
SPSB3-208ENST00000566339 OVOS2A0A0G2JMS6 1433 aa25.8■■□□□ 1.72
SPSB3-208ENST00000566339 SMAP1Q8IYB5 467 aaPredicted RBP25.8■■□□□ 1.72
SPSB3-208ENST00000566339 CLASRPQ8N2M8 674 aaKnown RBP25.8■■□□□ 1.72
SPSB3-208ENST00000566339 MTMR6Q9Y217 621 aa25.8■■□□□ 1.72
SPSB3-208ENST00000566339 CYP46A1Q9Y6A2 500 aa25.8■■□□□ 1.72
SPSB3-208ENST00000566339 EIF4A1P60842 406 aaKnown RBP25.79■■□□□ 1.72
SPSB3-208ENST00000566339 RASEFQ8IZ41 740 aa25.79■■□□□ 1.72
SPSB3-208ENST00000566339 EVI5LQ96CN4 794 aa25.79■■□□□ 1.72
SPSB3-208ENST00000566339 C19orf44Q9H6X5 657 aa25.79■■□□□ 1.72
SPSB3-208ENST00000566339 ECHDC1Q9NTX5 307 aa25.79■■□□□ 1.72
SPSB3-208ENST00000566339 PDRG1Q9NUG6 133 aa25.79■■□□□ 1.72
SPSB3-208ENST00000566339 PDCP20941 246 aa25.79■■□□□ 1.72
SPSB3-208ENST00000566339 ROBO1Q9Y6N7 1651 aa25.77■■□□□ 1.72
SPSB3-208ENST00000566339 CCDC192P0DO97 292 aa25.77■■□□□ 1.72
SPSB3-208ENST00000566339 HCLS1P14317 486 aaPredicted RBP25.77■■□□□ 1.72
SPSB3-208ENST00000566339 ZKSCAN1P17029 563 aaPredicted RBP25.77■■□□□ 1.72
SPSB3-208ENST00000566339 PSMA5P28066 241 aa25.77■■□□□ 1.72
SPSB3-208ENST00000566339 TCHHQ07283 1943 aa25.77■■□□□ 1.72
SPSB3-208ENST00000566339 ATF3P18847 181 aa25.77■■□□□ 1.72
SPSB3-208ENST00000566339 CASTP20810 708 aaKnown RBP25.77■■□□□ 1.72
SPSB3-208ENST00000566339 GJB2P29033 226 aa25.77■■□□□ 1.72
SPSB3-208ENST00000566339 NCAPD2Q15021 1401 aa25.77■■□□□ 1.72
SPSB3-208ENST00000566339 ANKRD1Q15327 319 aa25.77■■□□□ 1.72
SPSB3-208ENST00000566339 DNTTIP2Q5QJE6 756 aaKnown RBP25.77■■□□□ 1.72
SPSB3-208ENST00000566339 PHAXQ9H814 394 aaKnown RBP25.77■■□□□ 1.72
SPSB3-208ENST00000566339 NECTIN1Q15223 517 aa25.75■■□□□ 1.71
SPSB3-208ENST00000566339 CWC27Q6UX04 472 aaKnown RBP25.74■■□□□ 1.71
SPSB3-208ENST00000566339 CADPS2Q86UW7 1296 aa25.74■■□□□ 1.71
SPSB3-208ENST00000566339 NECTIN2Q92692 538 aa25.74■■□□□ 1.71
SPSB3-208ENST00000566339 CCDC94Q9BW85 323 aaPredicted RBP25.74■■□□□ 1.71
SPSB3-208ENST00000566339 CAMTA1Q9Y6Y1 1673 aa25.74■■□□□ 1.71
SPSB3-208ENST00000566339 NBPF7P0C2Y1 421 aaPredicted RBP25.73■■□□□ 1.71
SPSB3-208ENST00000566339 KRT85P78386 507 aa25.73■■□□□ 1.71
SPSB3-208ENST00000566339 FIBPO43427 364 aa25.72■■□□□ 1.71
SPSB3-208ENST00000566339 JAKMIP1Q96N16 626 aaKnown RBP25.72■■□□□ 1.71
SPSB3-208ENST00000566339 RGPD2P0DJD1 1756 aa25.72■■□□□ 1.71
SPSB3-208ENST00000566339 KIAA1524Q8TCG1 905 aa25.72■■□□□ 1.71
SPSB3-208ENST00000566339 DBF4Q9UBU7 674 aaPredicted RBP25.72■■□□□ 1.71
SPSB3-208ENST00000566339 ADCY9O60503 1353 aa25.71■■□□□ 1.71
SPSB3-208ENST00000566339 OS9Q13438 667 aaPredicted RBP25.71■■□□□ 1.71
SPSB3-208ENST00000566339 CCDC83Q8IWF9 413 aa25.71■■□□□ 1.71
SPSB3-208ENST00000566339 ABTB2Q8N961 1025 aa25.71■■□□□ 1.71
SPSB3-208ENST00000566339 FAM200AQ8TCP9 573 aa25.71■■□□□ 1.71
SPSB3-208ENST00000566339 IP6K1Q92551 441 aa25.71■■□□□ 1.71
SPSB3-208ENST00000566339 PI4KAP2A4QPH2 592 aa25.7■■□□□ 1.7
SPSB3-208ENST00000566339 MAP4K4O95819 1239 aaPredicted RBP25.7■■□□□ 1.7
SPSB3-208ENST00000566339 FOXD4L6Q3SYB3 417 aaPredicted RBP25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms