RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 CHPF2Q9P2E5 772 aa16.19■□□□□ 0.18
SHCBP1-204ENST00000565887 NFIXQ14938 502 aa16.18■□□□□ 0.18
SHCBP1-204ENST00000565887 HSP90AB3PQ58FF7 597 aa16.18■□□□□ 0.18
SHCBP1-204ENST00000565887 COPS6Q7L5N1 327 aa16.18■□□□□ 0.18
SHCBP1-204ENST00000565887 LRP10Q7Z4F1 713 aa16.18■□□□□ 0.18
SHCBP1-204ENST00000565887 SPINK5Q9NQ38 1064 aaPredicted RBP16.18■□□□□ 0.18
SHCBP1-204ENST00000565887 C4AP0C0L4 1744 aa16.18■□□□□ 0.18
SHCBP1-204ENST00000565887 DDX58O95786 925 aaKnown RBP16.17■□□□□ 0.18
SHCBP1-204ENST00000565887 CT47B1P0C2W7 299 aaPredicted RBP16.17■□□□□ 0.18
SHCBP1-204ENST00000565887 GIGYF2Q6Y7W6 1299 aaKnown RBP16.17■□□□□ 0.18
SHCBP1-204ENST00000565887 ANKRD13DQ6ZTN6 518 aa16.17■□□□□ 0.18
SHCBP1-204ENST00000565887 TRMT2AQ8IZ69 625 aaKnown RBP16.17■□□□□ 0.18
SHCBP1-204ENST00000565887 DCAF8L1A6NGE4 600 aa16.16■□□□□ 0.18
SHCBP1-204ENST00000565887 POLRMTO00411 1230 aaKnown RBP16.16■□□□□ 0.18
SHCBP1-204ENST00000565887 PROSER3Q2NL68 480 aa16.16■□□□□ 0.18
SHCBP1-204ENST00000565887 PLBD2Q8NHP8 589 aa16.16■□□□□ 0.18
SHCBP1-204ENST00000565887 XAGE3Q8WTP9 111 aa16.16■□□□□ 0.18
SHCBP1-204ENST00000565887 SYT17Q9BSW7 474 aa16.16■□□□□ 0.18
SHCBP1-204ENST00000565887 FHDC1Q9C0D6 1143 aaPredicted RBP16.16■□□□□ 0.18
SHCBP1-204ENST00000565887 SLC4A2P04920 1241 aa16.15■□□□□ 0.18
SHCBP1-204ENST00000565887 SERPINB2P05120 415 aa16.15■□□□□ 0.18
SHCBP1-204ENST00000565887 TGFB2P61812 414 aa16.15■□□□□ 0.18
SHCBP1-204ENST00000565887 AIMP1Q12904 312 aaKnown RBP16.15■□□□□ 0.18
SHCBP1-204ENST00000565887 TBC1D9BQ66K14 1250 aa16.15■□□□□ 0.18
SHCBP1-204ENST00000565887 TPTE2Q6XPS3 522 aa16.15■□□□□ 0.18
SHCBP1-204ENST00000565887 TTLL7Q6ZT98 887 aa16.15■□□□□ 0.18
SHCBP1-204ENST00000565887 PDZRN3Q9UPQ7 1066 aa16.15■□□□□ 0.18
SHCBP1-204ENST00000565887 CARMIL3Q8ND23 1372 aa16.14■□□□□ 0.17
SHCBP1-204ENST00000565887 ANXA1P04083 346 aa16.14■□□□□ 0.17
SHCBP1-204ENST00000565887 PARP10Q53GL7 1025 aa16.14■□□□□ 0.17
SHCBP1-204ENST00000565887 BICDL1Q6ZP65 573 aa16.14■□□□□ 0.17
SHCBP1-204ENST00000565887 NYXQ9GZU5 481 aa16.14■□□□□ 0.17
SHCBP1-204ENST00000565887 NIP7Q9Y221 180 aaKnown RBP eCLIP16.14■□□□□ 0.17
SHCBP1-204ENST00000565887 SRCAPQ6ZRS2 3230 aa16.13■□□□□ 0.17
SHCBP1-204ENST00000565887 NPHP1O15259 732 aa16.13■□□□□ 0.17
SHCBP1-204ENST00000565887 DDR1Q08345 913 aa16.13■□□□□ 0.17
SHCBP1-204ENST00000565887 HLFQ16534 295 aa16.13■□□□□ 0.17
SHCBP1-204ENST00000565887 ZBTB3Q9H5J0 574 aa16.13■□□□□ 0.17
SHCBP1-204ENST00000565887 ZBED9Q6R2W3 1325 aa16.13■□□□□ 0.17
SHCBP1-204ENST00000565887 CACNA1FO60840 1977 aa16.13■□□□□ 0.17
SHCBP1-204ENST00000565887 TCIRG1Q13488 830 aa16.12■□□□□ 0.17
SHCBP1-204ENST00000565887 PPP1R42Q7Z4L9 355 aa16.12■□□□□ 0.17
SHCBP1-204ENST00000565887 RIC3Q7Z5B4 369 aa16.12■□□□□ 0.17
SHCBP1-204ENST00000565887 NBPF5PQ86XG9 351 aaPredicted RBP16.12■□□□□ 0.17
SHCBP1-204ENST00000565887 ZNF34Q8IZ26 560 aa16.12■□□□□ 0.17
SHCBP1-204ENST00000565887 KLHL34Q8N239 644 aa16.12■□□□□ 0.17
SHCBP1-204ENST00000565887 CDCA7LQ96GN5 454 aa16.12■□□□□ 0.17
SHCBP1-204ENST00000565887 ST5P78524 1137 aa16.11■□□□□ 0.17
SHCBP1-204ENST00000565887 SCN7AQ01118 1682 aa16.11■□□□□ 0.17
SHCBP1-204ENST00000565887 ATP10DQ9P241 1426 aa16.11■□□□□ 0.17
SHCBP1-204ENST00000565887 GTF2E1P29083 439 aaPredicted RBP16.1■□□□□ 0.17
SHCBP1-204ENST00000565887 PDE6BP35913 854 aa16.1■□□□□ 0.17
SHCBP1-204ENST00000565887 TRIM28Q13263 835 aaKnown RBP16.1■□□□□ 0.17
SHCBP1-204ENST00000565887 ALDH1L2Q3SY69 923 aa16.1■□□□□ 0.17
SHCBP1-204ENST00000565887 KSR2Q6VAB6 950 aa16.1■□□□□ 0.17
SHCBP1-204ENST00000565887 CNBD1Q8NA66 436 aa16.1■□□□□ 0.17
SHCBP1-204ENST00000565887 BRIP1Q9BX63 1249 aa16.1■□□□□ 0.17
SHCBP1-204ENST00000565887 PHAXQ9H814 394 aaKnown RBP16.1■□□□□ 0.17
SHCBP1-204ENST00000565887 RNF123Q5XPI4 1314 aa16.1■□□□□ 0.17
SHCBP1-204ENST00000565887 BCORQ6W2J9 1755 aa16.09■□□□□ 0.17
SHCBP1-204ENST00000565887 NUP98P52948 1817 aa16.08■□□□□ 0.17
SHCBP1-204ENST00000565887 NEXNQ0ZGT2 675 aa16.08■□□□□ 0.16
SHCBP1-204ENST00000565887 IBTKQ9P2D0 1353 aaPredicted RBP16.08■□□□□ 0.16
SHCBP1-204ENST00000565887 HSP90B1P14625 803 aaKnown RBP16.07■□□□□ 0.16
SHCBP1-204ENST00000565887 FLIIQ13045 1269 aa16.07■□□□□ 0.16
SHCBP1-204ENST00000565887 PRR5LQ6MZQ0 368 aa16.07■□□□□ 0.16
SHCBP1-204ENST00000565887 METTL22Q9BUU2 404 aaPredicted RBP16.07■□□□□ 0.16
SHCBP1-204ENST00000565887 UTP14AQ9BVJ6 771 aaKnown RBP16.07■□□□□ 0.16
SHCBP1-204ENST00000565887 C10orf71Q711Q0 1435 aa16.07■□□□□ 0.16
SHCBP1-204ENST00000565887 PI4KAP2A4QPH2 592 aa16.06■□□□□ 0.16
SHCBP1-204ENST00000565887 H0YIN7 160 aa16.06■□□□□ 0.16
SHCBP1-204ENST00000565887 TCERG1O14776 1098 aaKnown RBP16.06■□□□□ 0.16
SHCBP1-204ENST00000565887 FKBP5Q13451 457 aaPredicted RBP16.06■□□□□ 0.16
SHCBP1-204ENST00000565887 PI4KAP1Q8N8J0 262 aa16.06■□□□□ 0.16
SHCBP1-204ENST00000565887 CCDC191Q8NCU4 936 aa16.06■□□□□ 0.16
SHCBP1-204ENST00000565887 ISCA1Q9BUE6 129 aa16.06■□□□□ 0.16
SHCBP1-204ENST00000565887 GPTP24298 496 aa16.05■□□□□ 0.16
SHCBP1-204ENST00000565887 SUSD4Q5VX71 490 aa16.05■□□□□ 0.16
SHCBP1-204ENST00000565887 NLRP10Q86W26 655 aa16.05■□□□□ 0.16
SHCBP1-204ENST00000565887 PIM2Q9P1W9 311 aa16.05■□□□□ 0.16
SHCBP1-204ENST00000565887 BRPF1P55201 1214 aaPredicted RBP16.04■□□□□ 0.16
SHCBP1-204ENST00000565887 SLC10A5Q5PT55 438 aa16.04■□□□□ 0.16
SHCBP1-204ENST00000565887 NLGN2Q8NFZ4 835 aa16.04■□□□□ 0.16
SHCBP1-204ENST00000565887 TRMT112Q9UI30 125 aaKnown RBP16.04■□□□□ 0.16
SHCBP1-204ENST00000565887 MAP3K2Q9Y2U5 619 aa16.04■□□□□ 0.16
SHCBP1-204ENST00000565887 NRXN2Q9P2S2 1712 aa16.04■□□□□ 0.16
SHCBP1-204ENST00000565887 KIF13BQ9NQT8 1826 aa16.03■□□□□ 0.16
SHCBP1-204ENST00000565887 PTPRCP08575 1304 aa16.03■□□□□ 0.16
SHCBP1-204ENST00000565887 UBN2Q6ZU65 1347 aa16.03■□□□□ 0.16
SHCBP1-204ENST00000565887 A0A0G2JLW4 131 aa16.03■□□□□ 0.16
SHCBP1-204ENST00000565887 KLRG2A4D1S0 409 aaPredicted RBP16.03■□□□□ 0.16
SHCBP1-204ENST00000565887 GRIN3BO60391 1043 aa16.03■□□□□ 0.16
SHCBP1-204ENST00000565887 GPR162Q16538 588 aa16.03■□□□□ 0.16
SHCBP1-204ENST00000565887 G2E3Q7L622 706 aa16.03■□□□□ 0.16
SHCBP1-204ENST00000565887 MRPL50Q8N5N7 158 aaKnown RBP16.03■□□□□ 0.16
SHCBP1-204ENST00000565887 DNAAF4Q8WXU2 420 aa16.03■□□□□ 0.16
SHCBP1-204ENST00000565887 AFDNP55196 1824 aaKnown RBP16.03■□□□□ 0.16
SHCBP1-204ENST00000565887 SH3TC1Q8TE82 1336 aa16.02■□□□□ 0.16
SHCBP1-204ENST00000565887 FAM177BA6PVY3 158 aa16.02■□□□□ 0.16
SHCBP1-204ENST00000565887 NTSR2O95665 410 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms